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Clc09G23120 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G23120
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSerine-rich protein-related, putative
Genome locationClcChr09:36475921..36476250
RNA-Seq ExpressionClc09G23120
SyntenyClc09G23120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048240.1 putative PGPS/D10 protein [Cucumis melo var. makuwa]8.4e-2773.26Show/hide
Query:  MSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSNLSDLARKSTEIMGPYSP
        M+ TE NL +LK   + L+  PS    A K PSSAK NCLCSPTTHIGSFRCRHHRH GMIRGGSVGSNLSDLARK TEIMGP+SP
Subjt:  MSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSNLSDLARKSTEIMGPYSP

KAF4362350.1 hypothetical protein F8388_008234 [Cannabis sativa]1.2e-1752.17Show/hide
Query:  PNDRNNLNHHHKMSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSNLSDLARKSTEI
        PN++    + +K++  E NLE+ K+  ++LV  P     +    SS + NCLCSPTTH+GSFRCRHHR  GM+RGGSVGSNL+DL RKS+ I
Subjt:  PNDRNNLNHHHKMSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSNLSDLARKSTEI

KAG6607735.1 hypothetical protein SDJN03_01077, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3066.04Show/hide
Query:  MDHKPDHKAPRPNDRNNLNHHHKMSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHT-GMIRGGSVGSNLSDLARK
        MDHKPDH+APRP  R++L+HH+K+ FT+F+LE+LK++P +LVSP   S     +P +AKG+CLCSPTTHIGSFRCRHHR + G++RGGSVGSNLSDL RK
Subjt:  MDHKPDHKAPRPNDRNNLNHHHKMSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHT-GMIRGGSVGSNLSDLARK

Query:  STEIMG
        S+E MG
Subjt:  STEIMG

KAG7024984.1 hypothetical protein SDJN02_13804, partial [Cucurbita argyrosperma subsp. argyrosperma]8.6e-4077.06Show/hide
Query:  MDHKPDHKAPRPNDRNNLNHHHKMSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSNLSDLARKS
        MDHKPDH+APRP DRNN NHHHK  FT+F+LE+ KQ  NLL S PSRS+ APKAPSSAK +CLCSPTTHIGSFRCRHHRHTGM+RG SVGSNLS+LA KS
Subjt:  MDHKPDHKAPRPNDRNNLNHHHKMSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSNLSDLARKS

Query:  TEIMGPYSP
        T++M  YSP
Subjt:  TEIMGPYSP

KGN44385.1 hypothetical protein Csa_015645 [Cucumis sativus]7.3e-3970.94Show/hide
Query:  MDHKPDHKAPRPNDRNNLN--------HHHKMSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSN
        MD+K DH+APRPNDRNN N        HHHKM+FT+ NLE+LKQ P +LVSP   S +A + PSSAK NCLCSPTTHIGSFRCRHHRH+GMIRGGSVGSN
Subjt:  MDHKPDHKAPRPNDRNNLN--------HHHKMSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSN

Query:  LSDLARKSTEIMGPYSP
        LSDL RK TEI+G +SP
Subjt:  LSDLARKSTEIMGPYSP

TrEMBL top hitse value%identityAlignment
A0A0A0K3W3 Uncharacterized protein3.5e-3970.94Show/hide
Query:  MDHKPDHKAPRPNDRNNLN--------HHHKMSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSN
        MD+K DH+APRPNDRNN N        HHHKM+FT+ NLE+LKQ P +LVSP   S +A + PSSAK NCLCSPTTHIGSFRCRHHRH+GMIRGGSVGSN
Subjt:  MDHKPDHKAPRPNDRNNLN--------HHHKMSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSN

Query:  LSDLARKSTEIMGPYSP
        LSDL RK TEI+G +SP
Subjt:  LSDLARKSTEIMGPYSP

A0A5A7TYF3 Putative PGPS/D10 protein4.1e-2773.26Show/hide
Query:  MSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSNLSDLARKSTEIMGPYSP
        M+ TE NL +LK   + L+  PS    A K PSSAK NCLCSPTTHIGSFRCRHHRH GMIRGGSVGSNLSDLARK TEIMGP+SP
Subjt:  MSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSNLSDLARKSTEIMGPYSP

A0A7J6EXD7 Uncharacterized protein5.9e-1852.17Show/hide
Query:  PNDRNNLNHHHKMSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSNLSDLARKSTEI
        PN++    + +K++  E NLE+ K+  ++LV  P     +    SS + NCLCSPTTH+GSFRCRHHR  GM+RGGSVGSNL+DL RKS+ I
Subjt:  PNDRNNLNHHHKMSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSNLSDLARKSTEI

A0A7J6H8T3 Uncharacterized protein1.3e-1749.04Show/hide
Query:  MDHKPDHK-APRPNDRNNLNHHHKMSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSNLSDLARK
        MD K + + +  PN++    + +K++  E NLE+ K+  ++LV  P     +    SS + NCLCSPTTH+GSFRCRHHR  GM+RGGSVGSNL+DL RK
Subjt:  MDHKPDHK-APRPNDRNNLNHHHKMSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSNLSDLARK

Query:  STEI
        S+ I
Subjt:  STEI

W9SBP1 Uncharacterized protein1.0e-1754.55Show/hide
Query:  MDHKPDHKAPRPNDRNNLNHHHKMSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSNLSDLARK
        MD K + ++P+    NN+N   K+   + NL ELK+  +LL SP  R+  A    SS + NCLCSPTTH GSFRCRHHR + M+RGGSVGSNLS+LARK
Subjt:  MDHKPDHKAPRPNDRNNLNHHHKMSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSNLSDLARK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67910.1 unknown protein1.9e-0561.76Show/hide
Query:  SSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSV
        S  K NCLCSPTTH GSFRCR HR   + R  S+
Subjt:  SSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSV

AT1G67910.2 unknown protein1.9e-0561.76Show/hide
Query:  SSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSV
        S  K NCLCSPTTH GSFRCR HR   + R  S+
Subjt:  SSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSV

AT3G13227.1 serine-rich protein-related3.8e-0966.67Show/hide
Query:  SSAKGNCLCSPTTHIGSFRCRHHRHT---GMIRGGSVGSNLSDLA
        SS + NCLC+PTTH GSFRCR+HR     GM RG SV SNLS LA
Subjt:  SSAKGNCLCSPTTHIGSFRCRHHRHT---GMIRGGSVGSNLSDLA

AT5G20370.1 serine-rich protein-related9.6e-0540.58Show/hide
Query:  NNLNHHHKMSF-----TEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHR
        NN +HHH+           NL     +P    S P  S+V   +    K  CLCSPTTH GSFRC  HR
Subjt:  NNLNHHHKMSF-----TEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHR

AT5G55980.1 serine-rich protein-related2.2e-0953.85Show/hide
Query:  PSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSNLSDL
        PS       +  S + NCLCSPTTH GSFRCR+HR   + R GS+GSNL+ L
Subjt:  PSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSNLSDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCATAAGCCAGATCACAAAGCTCCAAGGCCCAACGACAGAAACAACCTCAATCACCACCACAAAATGTCATTCACAGAGTTCAATTTGGAAGAACTTAAGCAAAC
TCCTAACCTGCTCGTTTCTCCGCCGTCGCGATCCATGGTGGCGCCCAAGGCTCCTTCCTCTGCCAAGGGGAATTGTCTCTGTTCTCCTACCACTCACATTGGCTCCTTCC
GCTGTCGGCACCACCGGCATACTGGTATGATCCGCGGCGGCTCCGTTGGCTCTAATCTCTCCGATTTGGCTCGTAAATCCACCGAAATTATGGGACCCTATTCGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCATAAGCCAGATCACAAAGCTCCAAGGCCCAACGACAGAAACAACCTCAATCACCACCACAAAATGTCATTCACAGAGTTCAATTTGGAAGAACTTAAGCAAAC
TCCTAACCTGCTCGTTTCTCCGCCGTCGCGATCCATGGTGGCGCCCAAGGCTCCTTCCTCTGCCAAGGGGAATTGTCTCTGTTCTCCTACCACTCACATTGGCTCCTTCC
GCTGTCGGCACCACCGGCATACTGGTATGATCCGCGGCGGCTCCGTTGGCTCTAATCTCTCCGATTTGGCTCGTAAATCCACCGAAATTATGGGACCCTATTCGCCTTGA
Protein sequenceShow/hide protein sequence
MDHKPDHKAPRPNDRNNLNHHHKMSFTEFNLEELKQTPNLLVSPPSRSMVAPKAPSSAKGNCLCSPTTHIGSFRCRHHRHTGMIRGGSVGSNLSDLARKSTEIMGPYSP