; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G23370 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G23370
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationClcChr09:36732131..36737874
RNA-Seq ExpressionClc09G23370
SyntenyClc09G23370
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN45331.2 hypothetical protein Csa_015776 [Cucumis sativus]4.6e-9552.76Show/hide
Query:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTN---------------------
        +LINGYCKT KVEEAM LYNEM QVGKRP+  TYG LLTGLFQ  +VG        +K+YGI  DSCIY IFLDGL  N                     
Subjt:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTN---------------------

Query:  --------------GKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK
                      GK ET WELFE L QEG+Q DVV +NIMIH FCK GQ+          EENGCTPDIITYNTLL GF +SNK  EVV LLH+M+Q+
Subjt:  --------------GKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK

Query:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR------------------------------------SYM-TCK---ITETEGLHFFDLMTRSNPTPPIS
        D+SP+AI+C IV+DML KDE+YQECLDLLPR                                    S++  CK   I   +  HFFDLM RS P P IS
Subjt:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR------------------------------------SYM-TCK---ITETEGLHFFDLMTRSNPTPPIS

Query:  SFNHLLGGLLRLN-------ITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLIKGLCMEPRINEAPKLFMRMQKL
        SFN LLGGL ++N       +  KM LAGL P L TLNIL + LCN+NRV EGL AM GILR  YIPD VTY TLIKGLC   RI+ A  LF+RMQKL
Subjt:  SFNHLLGGLLRLN-------ITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLIKGLCMEPRINEAPKLFMRMQKL

XP_011659273.2 pentatricopeptide repeat-containing protein At3g22470, mitochondrial [Cucumis sativus]4.8e-6056.52Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLDGLSTN----------------------
        LINGYCKTWKV+EAM LYNEM QVGKRP+V TYG LL GLFQ  +V       G +K+YG+  +S IYGIFLDGL  N                      
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLDGLSTN----------------------

Query:  -------------GKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKD
                     GK ET WELFE LSQEG+Q DVV +NIMIH FCK GQ+          EENGCTPDII YNTLL GF + NKL EV+ LLH+MVQKD
Subjt:  -------------GKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKD

Query:  VSPNAITCTIVVDMLSKDEEYQECLDLLPR
        VSPNA +CTIVVDML KDE+Y++ +DLLP+
Subjt:  VSPNAITCTIVVDMLSKDEEYQECLDLLPR

XP_015876665.2 pentatricopeptide repeat-containing protein At5g65560-like [Ziziphus jujuba]1.7e-6834.62Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLD---------------------------
        LINGYCK WK +E M L+ EM   G RPSV TY ALLTGLFQ  +V         ++  G+  +S  Y IFLD                           
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLD---------------------------

Query:  --------GLSTNGKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKD
                GL  + K E   ELF  L   G+  DVV +NI+I+  CKE           ++EE GC PDI+TYNTL+ GF +++K + VV LL +M +K+
Subjt:  --------GLSTNGKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKD

Query:  VSPNAITCTIVVDMLSKDEEYQECLDLLP-----------------------------------------------------------------------
        V P+A T +IV+D+LS D+ Y+ECL+LLP                                                                       
Subjt:  VSPNAITCTIVVDMLSKDEEYQECLDLLP-----------------------------------------------------------------------

Query:  --------------------RSYMT------CK---ITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILI
                            R+ +T      CK    T TE L +FD M    P P +SSFN LLG L +       L++  +M L GLLP  +TLN+LI
Subjt:  --------------------RSYMT------CK---ITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILI

Query:  DWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLIKGLCMEPRINEAPKLFMRMQK------------LVKGLYPTWNINIALKLHQGMLHETSRYGINC
        +  CNVNR+ +G V +  ++R  Y P+ VTYT+L+KGLC E RI EA KLF +M K            L+KGL  T N +IA+KLH+ + +  S YG+ C
Subjt:  DWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLIKGLCMEPRINEAPKLFMRMQK------------LVKGLYPTWNINIALKLHQGMLHETSRYGINC

Query:  KPNDICYSIIIDGLCKD
        +PN + Y  II GLCK+
Subjt:  KPNDICYSIIIDGLCKD

XP_038896203.1 pentatricopeptide repeat-containing protein At1g63330-like [Benincasa hispida]9.7e-6157.39Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLDGLSTN----------------------
        LINGYCKT KV EAMKLYNEM QVGKRP+V TYGALLTGLFQA +V       G +K+YG+  DSCIYGIFLDGL  N                      
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLDGLSTN----------------------

Query:  -------------GKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKD
                     GK ET WELF+ LSQEG+Q +VV +NIMIH FC++GQ+          EEN CTP++IT NTLLRGF +SNK  EVV LLHRMVQ+D
Subjt:  -------------GKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKD

Query:  VSPNAITCTIVVDMLSKDEEYQECLDLLPR
        V P+  TCTIV+DML KDE+Y+ECLDLLPR
Subjt:  VSPNAITCTIVVDMLSKDEEYQECLDLLPR

XP_038897332.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida]2.3e-6258.01Show/hide
Query:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLDGLSTN---------------------
        MLINGYCKT KV EAMKLYNEM QVGKRP+V TYGALLTGLFQA +V       G +K+YG+  DSCIYGIFLDGL  N                     
Subjt:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLDGLSTN---------------------

Query:  --------------GKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK
                      G  ET WELF+ LSQEG+Q +VV +NIMIH FC++GQ+          EENGCTP++IT NTLLRGF +SNK  EVV LLHRMVQ+
Subjt:  --------------GKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK

Query:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR
        DVSP+  TCTIVVDML KDE+Y+EC+DLLPR
Subjt:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR

TrEMBL top hitse value%identityAlignment
A0A0A0K5M0 Uncharacterized protein6.4e-5854.98Show/hide
Query:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTN---------------------
        +L N  C   +VEEAM LYNEM QVGKRP+  TYG LLTGLFQ  +VG        +K+YGI  DSCIY IFLDGL  N                     
Subjt:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTN---------------------

Query:  --------------GKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK
                      GK ET WELFE L QEG+Q DVV +NIMIH FCK GQ+          EENGCTPDIITYNTLL GF +SNK  EVV LLH+M+Q+
Subjt:  --------------GKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK

Query:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR
        D+SP+AI+C IV+DML KDE+YQECLDLLPR
Subjt:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR

A0A1S4DYL6 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like8.9e-6057.58Show/hide
Query:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTN---------------------
        +LINGYCKT KVEEAMKLYNEM  VGKRP+VITYGALLTGLF A +VG       A+K+ GI  +S IYGI LDGL  N                     
Subjt:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTN---------------------

Query:  --------------GKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK
                      GK ET WELFE LSQEG+Q +VV ++IMIH  C+EGQ+          E NGC P+IITYNTL+RGFY+SNKL EVV LLH MV+K
Subjt:  --------------GKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK

Query:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR
        DV P+A TC+IVVDML KDE+YQECLDLLPR
Subjt:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR

A0A5A7UUW8 Pentatricopeptide repeat-containing protein7.5e-5956.71Show/hide
Query:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTN---------------------
        +LINGYCKT KVEEAMKLYN+M  VGKRP+VITYGALLTGLF A +VG       A+K++GI E+SCIY IFLDGL  N                     
Subjt:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTN---------------------

Query:  --------------GKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK
                      GK ET WELFE LSQEG+Q +VV +NIMI  FCK G          ++EENGCTP IITY+ LLR F +SNK  EVV LLH+MVQ+
Subjt:  --------------GKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK

Query:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR
        DVSP+   CTIVVDML KDE+Y+ECLDLLPR
Subjt:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR

A0A5D3C8J0 Pentatricopeptide repeat-containing protein8.9e-6057.58Show/hide
Query:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTN---------------------
        +LINGYCKT KVEEAMKLYNEM  VGKRP+VITYGALLTGLF A +VG       A+K+ GI  +S IYGI LDGL  N                     
Subjt:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTN---------------------

Query:  --------------GKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK
                      GK ET WELFE LSQEG+Q +VV ++IMIH  C+EGQ+          E NGC P+IITYNTL+RGFY+SNKL EVV LLH MV+K
Subjt:  --------------GKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEGQI----------EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQK

Query:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR
        DV P+A TC+IVVDML KDE+YQECLDLLPR
Subjt:  DVSPNAITCTIVVDMLSKDEEYQECLDLLPR

A0A6P3ZCY1 pentatricopeptide repeat-containing protein At5g65560-like8.0e-6934.62Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLD---------------------------
        LINGYCK WK +E M L+ EM   G RPSV TY ALLTGLFQ  +V         ++  G+  +S  Y IFLD                           
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRV-------GAIKSYGIVEDSCIYGIFLD---------------------------

Query:  --------GLSTNGKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKD
                GL  + K E   ELF  L   G+  DVV +NI+I+  CKE           ++EE GC PDI+TYNTL+ GF +++K + VV LL +M +K+
Subjt:  --------GLSTNGKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKD

Query:  VSPNAITCTIVVDMLSKDEEYQECLDLLP-----------------------------------------------------------------------
        V P+A T +IV+D+LS D+ Y+ECL+LLP                                                                       
Subjt:  VSPNAITCTIVVDMLSKDEEYQECLDLLP-----------------------------------------------------------------------

Query:  --------------------RSYMT------CK---ITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILI
                            R+ +T      CK    T TE L +FD M    P P +SSFN LLG L +       L++  +M L GLLP  +TLN+LI
Subjt:  --------------------RSYMT------CK---ITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILI

Query:  DWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLIKGLCMEPRINEAPKLFMRMQK------------LVKGLYPTWNINIALKLHQGMLHETSRYGINC
        +  CNVNR+ +G V +  ++R  Y P+ VTYT+L+KGLC E RI EA KLF +M K            L+KGL  T N +IA+KLH+ + +  S YG+ C
Subjt:  DWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLIKGLCMEPRINEAPKLFMRMQK------------LVKGLYPTWNINIALKLHQGMLHETSRYGINC

Query:  KPNDICYSIIIDGLCKD
        +PN + Y  II GLCK+
Subjt:  KPNDICYSIIIDGLCKD

SwissProt top hitse value%identityAlignment
Q0WKV3 Pentatricopeptide repeat-containing protein At1g12300, mitochondrial1.1e-3327.37Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASR-------VGAIKSYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLDV
        LING C   +V EA++L + M ++G +P +IT   L+ GL  + +       +  +  YG   ++  YG  L+ +  +G+     EL   + +  ++LD 
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASR-------VGAIKSYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLDV

Query:  VAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC
        V ++I+I   CK G          ++E  G T +IITYN L+ GF  + +  +   LL  M+++ ++PN +T ++++D   K+                 
Subjt:  VAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC

Query:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLNITPK-------MRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI
        K+ E E LH    M      P   ++  L+ G  + N   K       M   G  P + T NILI+  C  NR+ +GL     +     + DTVTY TLI
Subjt:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLNITPK-------MRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI

Query:  KGLCMEPRINEAPKLFMRM------------QKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLC
        +G C   ++N A +LF  M            + L+ GL        AL++ + +  E S+  ++       Y+III G+C
Subjt:  KGLCMEPRINEAPKLFMRM------------QKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLC

Q9ASZ8 Pentatricopeptide repeat-containing protein At1g126202.9e-3125.59Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLDV
        L+NG C   KV +A+ L + M + G +P+ +TYG +L  + ++ +          ++   I  D+  Y I +DGL  +G  +  + LF  +  +G + D+
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLDV

Query:  VAHNIMIHEFCKEGQIEENG----------CTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC
        + +  +I  FC  G+ ++             TPD++ ++ L+  F K  KL E   L   M+Q+ +SP+ +T T ++D   K+ +    LD         
Subjt:  VAHNIMIHEFCKEGQIEENG----------CTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC

Query:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLNITP-------KMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI
             +  H  DLM      P I +FN L+ G  + N+         KM L G++   +T N LI   C + +++        ++     PD V+Y  L+
Subjt:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLNITP-------KMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI

Query:  KGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHET---SRYGINC-------KPNDICYSIIIDGLCK
         GLC      +A ++F +++K    L    +I I   +  GM + +     + + C       KP+   Y+I+I GLCK
Subjt:  KGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHET---SRYGINC-------KPNDICYSIIIDGLCK

Q9C8T7 Pentatricopeptide repeat-containing protein At1g633307.1e-3025.99Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASR-------VGAIKSYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLDV
        L+NGYC   ++ +A+ L ++M ++G RP  IT+  L+ GLF  ++       V  +   G   +   YG+ ++GL   G  +  + L   +    ++ DV
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASR-------VGAIKSYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLDV

Query:  VAHNIMIHEFCKE----------GQIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC
        V  N +I   CK            ++E  G  P+++TY++L+       + ++   LL  M++K ++PN +T   ++D   K+                 
Subjt:  VAHNIMIHEFCKE----------GQIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC

Query:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLNITPK-------MRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI
        K  E E LH  D M + +  P I ++N L+ G    +   K       M      P L T N LI   C   RV++G      +     + DTVTYTTLI
Subjt:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLNITPK-------MRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI

Query:  KGLCMEPRINEAPKLFMRMQKLVKGLYP---TWNINIALKLHQGMLHETSRYGINCKPNDI-----CYSIIIDGLCK
        +GL  +   + A K+F +M  +  G+ P   T++I +    + G L +        + ++I      Y+ +I+G+CK
Subjt:  KGLCMEPRINEAPKLFMRMQKLVKGLYP---TWNINIALKLHQGMLHETSRYGINCKPNDI-----CYSIIIDGLCK

Q9LPX2 Pentatricopeptide repeat-containing protein At1g12775, mitochondrial1.4e-3327.11Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLDV
        L+NG C   +V EA++L + M ++G +P++IT   L+ GL    +V         +   G   +   YG  L+ +  +G+     EL   + +  ++LD 
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLDV

Query:  VAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC
        V ++I+I   CK+G          ++E  G   DIITYNTL+ GF  + +  +   LL  M+++ +SPN +T ++++D   K+ + +E   LL       
Subjt:  VAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC

Query:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLN-------ITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI
                     M +    P   ++N L+ G  + N       +   M   G  P +MT NILI+  C  NR+ +GL     +     I +TVTY TL+
Subjt:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLN-------ITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI

Query:  KGLCMEPRINEAPKLFMRM------------QKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLC
        +G C   ++  A KLF  M            + L+ GL     +  AL++   +  E S+  ++       Y III G+C
Subjt:  KGLCMEPRINEAPKLFMRM------------QKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLC

Q9T0D6 Pentatricopeptide repeat-containing protein At4g116909.2e-3023.72Show/hide
Query:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVGAIK-------SYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLD
        +LI G C+  ++E++  L  E+ + G  P+V+ Y  L+ G  +   +   K         G+V +   Y + ++GL  NG  +  +E++E + ++GV  +
Subjt:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVGAIK-------SYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLD

Query:  VVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMT
        +  +N ++++ CK+G          ++ E G + +I+TYNTL+ G  +  KL E   ++ +M    ++PN IT   ++D      +  + L L       
Subjt:  VVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMT

Query:  CKITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTL
        C+  ++ GL           +P + ++N L+ G  R         +  +M   G+ P  +T  ILID     + +++ +     +     +PD  TY+ L
Subjt:  CKITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTL

Query:  IKGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLCKD
        I G C++ ++NEA +LF  M +                              NC+PN++ Y+ +I G CK+
Subjt:  IKGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLCKD

Arabidopsis top hitse value%identityAlignment
AT1G12300.1 Tetratricopeptide repeat (TPR)-like superfamily protein7.5e-3527.37Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASR-------VGAIKSYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLDV
        LING C   +V EA++L + M ++G +P +IT   L+ GL  + +       +  +  YG   ++  YG  L+ +  +G+     EL   + +  ++LD 
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASR-------VGAIKSYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLDV

Query:  VAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC
        V ++I+I   CK G          ++E  G T +IITYN L+ GF  + +  +   LL  M+++ ++PN +T ++++D   K+                 
Subjt:  VAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC

Query:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLNITPK-------MRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI
        K+ E E LH    M      P   ++  L+ G  + N   K       M   G  P + T NILI+  C  NR+ +GL     +     + DTVTY TLI
Subjt:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLNITPK-------MRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI

Query:  KGLCMEPRINEAPKLFMRM------------QKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLC
        +G C   ++N A +LF  M            + L+ GL        AL++ + +  E S+  ++       Y+III G+C
Subjt:  KGLCMEPRINEAPKLFMRM------------QKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLC

AT1G12620.1 Pentatricopeptide repeat (PPR) superfamily protein2.0e-3225.59Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLDV
        L+NG C   KV +A+ L + M + G +P+ +TYG +L  + ++ +          ++   I  D+  Y I +DGL  +G  +  + LF  +  +G + D+
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLDV

Query:  VAHNIMIHEFCKEGQIEENG----------CTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC
        + +  +I  FC  G+ ++             TPD++ ++ L+  F K  KL E   L   M+Q+ +SP+ +T T ++D   K+ +    LD         
Subjt:  VAHNIMIHEFCKEGQIEENG----------CTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC

Query:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLNITP-------KMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI
             +  H  DLM      P I +FN L+ G  + N+         KM L G++   +T N LI   C + +++        ++     PD V+Y  L+
Subjt:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLNITP-------KMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI

Query:  KGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHET---SRYGINC-------KPNDICYSIIIDGLCK
         GLC      +A ++F +++K    L    +I I   +  GM + +     + + C       KP+   Y+I+I GLCK
Subjt:  KGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHET---SRYGINC-------KPNDICYSIIIDGLCK

AT1G12775.1 Pentatricopeptide repeat (PPR) superfamily protein9.8e-3527.11Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLDV
        L+NG C   +V EA++L + M ++G +P++IT   L+ GL    +V         +   G   +   YG  L+ +  +G+     EL   + +  ++LD 
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVG-------AIKSYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLDV

Query:  VAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC
        V ++I+I   CK+G          ++E  G   DIITYNTL+ GF  + +  +   LL  M+++ +SPN +T ++++D   K+ + +E   LL       
Subjt:  VAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC

Query:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLN-------ITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI
                     M +    P   ++N L+ G  + N       +   M   G  P +MT NILI+  C  NR+ +GL     +     I +TVTY TL+
Subjt:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLN-------ITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI

Query:  KGLCMEPRINEAPKLFMRM------------QKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLC
        +G C   ++  A KLF  M            + L+ GL     +  AL++   +  E S+  ++       Y III G+C
Subjt:  KGLCMEPRINEAPKLFMRM------------QKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLC

AT1G63330.1 Pentatricopeptide repeat (PPR) superfamily protein5.0e-3125.99Show/hide
Query:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASR-------VGAIKSYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLDV
        L+NGYC   ++ +A+ L ++M ++G RP  IT+  L+ GLF  ++       V  +   G   +   YG+ ++GL   G  +  + L   +    ++ DV
Subjt:  LINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASR-------VGAIKSYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLDV

Query:  VAHNIMIHEFCKE----------GQIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC
        V  N +I   CK            ++E  G  P+++TY++L+       + ++   LL  M++K ++PN +T   ++D   K+                 
Subjt:  VAHNIMIHEFCKE----------GQIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTC

Query:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLNITPK-------MRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI
        K  E E LH  D M + +  P I ++N L+ G    +   K       M      P L T N LI   C   RV++G      +     + DTVTYTTLI
Subjt:  KITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRLNITPK-------MRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLI

Query:  KGLCMEPRINEAPKLFMRMQKLVKGLYP---TWNINIALKLHQGMLHETSRYGINCKPNDI-----CYSIIIDGLCK
        +GL  +   + A K+F +M  +  G+ P   T++I +    + G L +        + ++I      Y+ +I+G+CK
Subjt:  KGLCMEPRINEAPKLFMRMQKLVKGLYP---TWNINIALKLHQGMLHETSRYGINCKPNDI-----CYSIIIDGLCK

AT4G11690.1 Pentatricopeptide repeat (PPR-like) superfamily protein6.6e-3123.72Show/hide
Query:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVGAIK-------SYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLD
        +LI G C+  ++E++  L  E+ + G  P+V+ Y  L+ G  +   +   K         G+V +   Y + ++GL  NG  +  +E++E + ++GV  +
Subjt:  MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVGAIK-------SYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLD

Query:  VVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMT
        +  +N ++++ CK+G          ++ E G + +I+TYNTL+ G  +  KL E   ++ +M    ++PN IT   ++D      +  + L L       
Subjt:  VVAHNIMIHEFCKEG----------QIEENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMT

Query:  CKITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTL
        C+  ++ GL           +P + ++N L+ G  R         +  +M   G+ P  +T  ILID     + +++ +     +     +PD  TY+ L
Subjt:  CKITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLR-------LNITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTL

Query:  IKGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLCKD
        I G C++ ++NEA +LF  M +                              NC+PN++ Y+ +I G CK+
Subjt:  IKGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHETSRYGINCKPNDICYSIIIDGLCKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAATTAATGGGTATTGTAAAACTTGGAAGGTGGAAGAAGCAATGAAGCTTTACAATGAAATGCCTCAAGTGGGAAAGAGGCCAAGTGTGATAACATATGGTGCCTT
GCTGACAGGGCTTTTTCAGGCAAGCAGGGTTGGGGCCATTAAATCTTATGGTATTGTCGAAGATTCATGTATATATGGTATTTTCTTAGATGGGTTGAGTACGAATGGAA
AATTTGAAACTACTTGGGAGCTTTTTGAAAACCTATCCCAAGAAGGGGTTCAACTAGATGTTGTGGCTCATAACATTATGATCCATGAGTTTTGTAAAGAGGGACAAATA
GAAGAAAATGGTTGTACTCCCGACATAATTACTTATAATACACTTCTGCGTGGTTTCTACAAAAGTAATAAATTAGCGGAGGTGGTTGCACTTCTTCATAGGATGGTTCA
AAAGGATGTGTCGCCAAATGCCATAACTTGCACCATAGTCGTAGACATGCTTTCCAAAGATGAAGAATATCAAGAATGTCTAGACTTGCTTCCAAGGAGCTATATGACTT
GTAAAATTACCGAAACTGAAGGATTACATTTCTTTGACCTAATGACGCGTTCAAATCCCACCCCTCCGATATCTTCATTCAATCATCTACTTGGTGGACTTCTAAGATTA
AACATTACTCCCAAAATGCGCCTAGCTGGACTTTTGCCTGGTTTAATGACGCTGAATATTTTGATTGATTGGCTTTGTAATGTGAATCGGGTTAAAGAAGGTCTAGTGGC
CATGGCAGGGATTTTAAGGAGTTGTTATATTCCTGATACGGTGACATATACGACCTTGATTAAGGGCTTGTGTATGGAGCCTAGGATTAATGAAGCGCCAAAGTTATTTA
TGAGAATGCAAAAGTTAGTCAAGGGACTCTATCCAACGTGGAATATTAACATTGCACTTAAGTTGCATCAAGGAATGCTCCATGAGACTAGTCGATATGGGATTAATTGT
AAGCCTAATGACATTTGCTATTCTATCATTATAGACGGACTTTGTAAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAATTAATGGGTATTGTAAAACTTGGAAGGTGGAAGAAGCAATGAAGCTTTACAATGAAATGCCTCAAGTGGGAAAGAGGCCAAGTGTGATAACATATGGTGCCTT
GCTGACAGGGCTTTTTCAGGCAAGCAGGGTTGGGGCCATTAAATCTTATGGTATTGTCGAAGATTCATGTATATATGGTATTTTCTTAGATGGGTTGAGTACGAATGGAA
AATTTGAAACTACTTGGGAGCTTTTTGAAAACCTATCCCAAGAAGGGGTTCAACTAGATGTTGTGGCTCATAACATTATGATCCATGAGTTTTGTAAAGAGGGACAAATA
GAAGAAAATGGTTGTACTCCCGACATAATTACTTATAATACACTTCTGCGTGGTTTCTACAAAAGTAATAAATTAGCGGAGGTGGTTGCACTTCTTCATAGGATGGTTCA
AAAGGATGTGTCGCCAAATGCCATAACTTGCACCATAGTCGTAGACATGCTTTCCAAAGATGAAGAATATCAAGAATGTCTAGACTTGCTTCCAAGGAGCTATATGACTT
GTAAAATTACCGAAACTGAAGGATTACATTTCTTTGACCTAATGACGCGTTCAAATCCCACCCCTCCGATATCTTCATTCAATCATCTACTTGGTGGACTTCTAAGATTA
AACATTACTCCCAAAATGCGCCTAGCTGGACTTTTGCCTGGTTTAATGACGCTGAATATTTTGATTGATTGGCTTTGTAATGTGAATCGGGTTAAAGAAGGTCTAGTGGC
CATGGCAGGGATTTTAAGGAGTTGTTATATTCCTGATACGGTGACATATACGACCTTGATTAAGGGCTTGTGTATGGAGCCTAGGATTAATGAAGCGCCAAAGTTATTTA
TGAGAATGCAAAAGTTAGTCAAGGGACTCTATCCAACGTGGAATATTAACATTGCACTTAAGTTGCATCAAGGAATGCTCCATGAGACTAGTCGATATGGGATTAATTGT
AAGCCTAATGACATTTGCTATTCTATCATTATAGACGGACTTTGTAAGGATTGA
Protein sequenceShow/hide protein sequence
MLINGYCKTWKVEEAMKLYNEMPQVGKRPSVITYGALLTGLFQASRVGAIKSYGIVEDSCIYGIFLDGLSTNGKFETTWELFENLSQEGVQLDVVAHNIMIHEFCKEGQI
EENGCTPDIITYNTLLRGFYKSNKLAEVVALLHRMVQKDVSPNAITCTIVVDMLSKDEEYQECLDLLPRSYMTCKITETEGLHFFDLMTRSNPTPPISSFNHLLGGLLRL
NITPKMRLAGLLPGLMTLNILIDWLCNVNRVKEGLVAMAGILRSCYIPDTVTYTTLIKGLCMEPRINEAPKLFMRMQKLVKGLYPTWNINIALKLHQGMLHETSRYGINC
KPNDICYSIIIDGLCKD