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Clc09G23540 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G23540
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:36873169..36884490
RNA-Seq ExpressionClc09G23540
SyntenyClc09G23540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599005.1 hypothetical protein SDJN03_08783, partial [Cucurbita argyrosperma subsp. sororia]1.7e-0849.04Show/hide
Query:  LTAVARQRPSPASSFSFFSPSAAAARRLAGTPPLLPRLLFLLLSLSLYLLQVTPARHPSVLPQPHDCPLTSFAASRRCGPLQSSPARSI-SQSLAVETFF
        +TAV R+ PS   S SFF+PS            L PR               TPA HP VLPQPH C L SFAA RR GPL SSP  SI  QSLAVE F+
Subjt:  LTAVARQRPSPASSFSFFSPSAAAARRLAGTPPLLPRLLFLLLSLSLYLLQVTPARHPSVLPQPHDCPLTSFAASRRCGPLQSSPARSI-SQSLAVETFF

Query:  GGLT
         G T
Subjt:  GGLT
KAG7029972.1 hypothetical protein SDJN02_08316, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-0852Show/hide
Query:  PSPAS-SFSFFSPSAAAAR---RLAGTPPLLPRLLFLLLSLSLYLLQVTPARHPSVLPQPHDCPLTSFAASRRCGPLQSSPARSI-SQSLAVETFFGGLT
        P+P +  FSFF  S +AA     L+  PPL P   F       +    TPA HP VLPQPH C L SFAA RR GPLQSSP  SI  QSLAVE F+ G T
Subjt:  PSPAS-SFSFFSPSAAAAR---RLAGTPPLLPRLLFLLLSLSLYLLQVTPARHPSVLPQPHDCPLTSFAASRRCGPLQSSPARSI-SQSLAVETFFGGLT
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATGATGAAGATGATGATGATTAAATGGGAAGAGGAGAAAATGGAGAGGGTCTTATATAGTGAGGACGAAAGAGACAATTTCAAAGGTTTGAGCTATGGCGGGCT
GCCATGGAAGGTTCTGAGCAAAACCCAGGTAGACGCGGTATGGCCTATTACTACACTGCAAACACAAGGAGGGAATGTATTGGTTATAGGGGTACTATTTCTTACCGCAG
TCGCACGCCAACGCCCATCACCGGCCAGCTCGTTTTCTTTCTTCTCTCCCTCCGCCGCAGCCGCACGCCGGCTCGCCGGCACTCCTCCACTACTCCCACGGCTTCTTTTC
CTTCTTCTCTCCCTATCTCTCTATCTGCTGCAAGTCACGCCAGCGCGCCACCCCAGTGTTCTGCCGCAGCCGCATGATTGCCCACTAACTTCTTTTGCAGCTTCCCGTCG
CTGTGGTCCACTCCAATCTTCCCCTGCTCGCTCCATCTCTCAGTCGCTCGCCGTTGAGACCTTCTTCGGTGGTTTAACCAATTCCCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATGATGAAGATGATGATGATTAAATGGGAAGAGGAGAAAATGGAGAGGGTCTTATATAGTGAGGACGAAAGAGACAATTTCAAAGGTTTGAGCTATGGCGGGCT
GCCATGGAAGGTTCTGAGCAAAACCCAGGTAGACGCGGTATGGCCTATTACTACACTGCAAACACAAGGAGGGAATGTATTGGTTATAGGGGTACTATTTCTTACCGCAG
TCGCACGCCAACGCCCATCACCGGCCAGCTCGTTTTCTTTCTTCTCTCCCTCCGCCGCAGCCGCACGCCGGCTCGCCGGCACTCCTCCACTACTCCCACGGCTTCTTTTC
CTTCTTCTCTCCCTATCTCTCTATCTGCTGCAAGTCACGCCAGCGCGCCACCCCAGTGTTCTGCCGCAGCCGCATGATTGCCCACTAACTTCTTTTGCAGCTTCCCGTCG
CTGTGGTCCACTCCAATCTTCCCCTGCTCGCTCCATCTCTCAGTCGCTCGCCGTTGAGACCTTCTTCGGTGGTTTAACCAATTCCCGGTAA
Protein sequenceShow/hide protein sequence
MKMMKMMMIKWEEEKMERVLYSEDERDNFKGLSYGGLPWKVLSKTQVDAVWPITTLQTQGGNVLVIGVLFLTAVARQRPSPASSFSFFSPSAAAARRLAGTPPLLPRLLF
LLLSLSLYLLQVTPARHPSVLPQPHDCPLTSFAASRRCGPLQSSPARSISQSLAVETFFGGLTNSR