; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G23700 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G23700
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionZinc finger protein 5
Genome locationClcChr09:37078793..37079468
RNA-Seq ExpressionClc09G23700
SyntenyClc09G23700
Gene Ontology termsGO:0010090 - trichome morphogenesis (biological process)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038869.1 zinc finger protein 5 [Cucumis melo var. makuwa]5.7e-4361.29Show/hide
Query:  MDKPFSFDFVSPISSTSSSSSHKKPPRLFGIELI-NVP------------------AEAKDSPIT-RLCGNLGDRPMRS-KSRRTFHCQYCFKEFANSQA
        MDK FSFDF+         SS  KP RLFGIELI NVP                  + +  S IT RLCGNL DRPMR+ K+R  FHCQYC KEF NSQA
Subjt:  MDKPFSFDFVSPISSTSSSSSHKKPPRLFGIELI-NVP------------------AEAKDSPIT-RLCGNLGDRPMRS-KSRRTFHCQYCFKEFANSQA

Query:  LGGHQNAHKKERLKQKKLQIQAQNSSLIHHYLQNYFNSHFAHDFDGSHISFTFRTTADVDDFHHNHCTVAASDPASAASQFHLFPF
        LGGHQNAHKKERLKQK+LQI+AQ SSL   YLQNYFNSHF+H+FDGSHISFTFRT+        N  +VAASDPAS A +F LFPF
Subjt:  LGGHQNAHKKERLKQKKLQIQAQNSSLIHHYLQNYFNSHFAHDFDGSHISFTFRTTADVDDFHHNHCTVAASDPASAASQFHLFPF

KAG6599021.1 Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. sororia]4.5e-3271.17Show/hide
Query:  RLFGIELINVPA-----EAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHHYLQNYFNSHFAH
        RLFGIEL+++P      E +DSP+T LCGNL DRPMRSK  R F C+YC KEF NSQALGGHQNAHKKERLK+K LQIQAQNSSL  HYLQNY+NSHFA 
Subjt:  RLFGIELINVPA-----EAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHHYLQNYFNSHFAH

Query:  DFDGSHISFTF
        +  G HISF F
Subjt:  DFDGSHISFTF

XP_004143824.1 zinc finger protein 5 [Cucumis sativus]1.3e-4259.67Show/hide
Query:  MDKPFSFDFVSPISSTSSSSSHKKPPRLFGIELINVP--------------AEAKDSPIT-RLCGNLGDRPMRS-KSRRTFHCQYCFKEFANSQALGGHQ
        MDK FSFDF+         SS KKP RLFGIELINVP              + +  S IT RLC NL DRPMR+ ++R  FHCQYC KEF NSQALGGHQ
Subjt:  MDKPFSFDFVSPISSTSSSSSHKKPPRLFGIELINVP--------------AEAKDSPIT-RLCGNLGDRPMRS-KSRRTFHCQYCFKEFANSQALGGHQ

Query:  NAHKKERLKQKKLQIQAQNSSLIHHYLQNYFNSHFAHDFDGSHISFTFRTTADVDDFHHNHCTVAASDPASAASQFHLFPF
        NAHKKERLKQK+LQI+AQNSSL   YLQ YFNSHF+H+FDGSHISFTFRT        +N  +VA+ D  ++A +F LFPF
Subjt:  NAHKKERLKQKKLQIQAQNSSLIHHYLQNYFNSHFAHDFDGSHISFTFRTTADVDDFHHNHCTVAASDPASAASQFHLFPF

XP_023520460.1 zinc finger protein 5-like [Cucurbita pepo subsp. pepo]1.8e-3373.64Show/hide
Query:  RLFGIELINVPA----EAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHHYLQNYFNSHFAHD
        RLFGIEL+++P     E +DSP+T LCGNL DRPMRSK  R F CQYC KEF NSQALGGHQNAHKKERLK+K LQIQAQNSSL  HYLQNY+NSHFA +
Subjt:  RLFGIELINVPA----EAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHHYLQNYFNSHFAHD

Query:  FDGSHISFTF
         DG HISF F
Subjt:  FDGSHISFTF

XP_038889251.1 zinc finger protein 5-like [Benincasa hispida]9.1e-4969.41Show/hide
Query:  MDKPFSFDFVSPISSTSSSSSHKKPPRLFGIELINVPA----EAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKK
        MDK FSFDF+          SHKKP RLFGIELIN+ A    E+  S +TRLCG LGDRPM     RTFHCQYCFKEF NSQALGGHQNAHKKERLK+KK
Subjt:  MDKPFSFDFVSPISSTSSSSSHKKPPRLFGIELINVPA----EAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKK

Query:  LQIQAQNSSLIHHYLQNYFNSHFAHDFDGSHISFTFRTTADVDDFHHNHCTVAASDPASAASQFHLFPFL
        LQIQAQ SSL H YLQNYFNSHFA +F+GSHISF    T D  +FHHN   VAASDP S AS+FHLFPFL
Subjt:  LQIQAQNSSLIHHYLQNYFNSHFAHDFDGSHISFTFRTTADVDDFHHNHCTVAASDPASAASQFHLFPFL

TrEMBL top hitse value%identityAlignment
A0A0A0KNG0 C2H2-type domain-containing protein8.6e-2966.98Show/hide
Query:  KSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHHYLQNYFNSHFAHDFDGSHISFTFRTTADVDDFHHNHCTVAASDPASAASQ
        ++R  FHCQYC KEF NSQALGGHQNAHKKERLKQK+LQI+AQNSSL   YLQ YFNSHF+H+FDGSHISFTFRT        +N  +VA+ D  ++A +
Subjt:  KSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHHYLQNYFNSHFAHDFDGSHISFTFRTTADVDDFHHNHCTVAASDPASAASQ

Query:  FHLFPF
        F LFPF
Subjt:  FHLFPF

A0A445DPC9 C2H2-type domain-containing protein3.2e-1536.52Show/hide
Query:  ISSTSSSSSHKKPPRLFGIELINVPAEAKDSPI-TRLCGNL---GDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIH
        + + +  SS  K  +LFG ELIN    ++D  + +    +L   GD   ++ + +   CQYC+KEFANSQALGGHQNAHKKER+K+KKLQ+Q  N++ I+
Subjt:  ISSTSSSSSHKKPPRLFGIELINVPAEAKDSPI-TRLCGNL---GDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIH

Query:  HYLQN--------------YFNSHFAHDFDGSHISFTFRTTADVDDFHH----------NHCTVAASDPASAASQFHL
        HYL                Y  S F  +   S ISF      D D   H          N+C    S  +S   Q H+
Subjt:  HYLQN--------------YFNSHFAHDFDGSHISFTFRTTADVDDFHH----------NHCTVAASDPASAASQFHL

A0A5A7TC61 Zinc finger protein 52.8e-4361.29Show/hide
Query:  MDKPFSFDFVSPISSTSSSSSHKKPPRLFGIELI-NVP------------------AEAKDSPIT-RLCGNLGDRPMRS-KSRRTFHCQYCFKEFANSQA
        MDK FSFDF+         SS  KP RLFGIELI NVP                  + +  S IT RLCGNL DRPMR+ K+R  FHCQYC KEF NSQA
Subjt:  MDKPFSFDFVSPISSTSSSSSHKKPPRLFGIELI-NVP------------------AEAKDSPIT-RLCGNLGDRPMRS-KSRRTFHCQYCFKEFANSQA

Query:  LGGHQNAHKKERLKQKKLQIQAQNSSLIHHYLQNYFNSHFAHDFDGSHISFTFRTTADVDDFHHNHCTVAASDPASAASQFHLFPF
        LGGHQNAHKKERLKQK+LQI+AQ SSL   YLQNYFNSHF+H+FDGSHISFTFRT+        N  +VAASDPAS A +F LFPF
Subjt:  LGGHQNAHKKERLKQKKLQIQAQNSSLIHHYLQNYFNSHFAHDFDGSHISFTFRTTADVDDFHHNHCTVAASDPASAASQFHLFPF

A0A6J1DUD1 zinc finger protein 5-like6.2e-2752.29Show/hide
Query:  MDKPFSFDFVSPISSTSSSSSHKKPPRLFGIELINVPAEAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQ
        M+K F  DFVSP+ S+   +      RLFG EL+  PAE  DSP+T LCG++GD P+RSK    F CQYC K+F+N  ALGGHQNAHKKERLK+K+LQ+Q
Subjt:  MDKPFSFDFVSPISSTSSSSSHKKPPRLFGIELINVPAEAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQ

Query:  AQNSSLIHHYLQNYFNSH-----FAHDFDGSHISFTFRTT---ADVDDFHHNH
        A+NSSL H YLQNY ++      F HD +GSH + +F T+     V+ F  +H
Subjt:  AQNSSLIHHYLQNYFNSH-----FAHDFDGSHISFTFRTT---ADVDDFHHNH

A0A6P4CTK6 zinc finger protein 54.2e-1543.33Show/hide
Query:  ISSTSSSSSHKKPPRLFGIELIN--------VPAEAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNS
        +   +  SS  K  +LFG ELIN        +  E+ +S  +      GDR  ++ + +   CQYC+KEFANSQALGGHQNAHKKER+K+KKLQ+Q  N+
Subjt:  ISSTSSSSSHKKPPRLFGIELIN--------VPAEAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNS

Query:  SLIHHYLQNYFNSHFAHDFD
        + I+HYL    +S+  +  D
Subjt:  SLIHHYLQNYFNSHFAHDFD

SwissProt top hitse value%identityAlignment
P93751 Zinc finger protein 81.4e-0734.75Show/hide
Query:  RLFGIELI-----NVPAEAKDSPIT----RLCGNLGDRPMR--------SKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHH
        RLFG EL+     N+ AE  D   T        N+ D+           + + R F C YCF+ F  SQALGGHQNAHK+ER   K+       +S +HH
Subjt:  RLFGIELI-----NVPAEAKDSPIT----RLCGNLGDRPMR--------SKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHH

Query:  YLQNYFNSHFAHDFDGSH
        +  +  + H  + F  +H
Subjt:  YLQNYFNSHFAHDFDGSH

Q39264 Zinc finger protein 51.2e-1446.67Show/hide
Query:  VSPISSTSSSSSHKKPPRLFGIELINVPAEAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHH
        +S    +SS SS  K  +LFG ELI+     + +    +  +     +    R    CQYC KEFANSQALGGHQNAHKKERLK+K+LQ+QA+ +S I +
Subjt:  VSPISSTSSSSSHKKPPRLFGIELINVPAEAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHH

Query:  YLQNY
        YL N+
Subjt:  YLQNY

Q39265 Zinc finger protein 66.6e-1044.44Show/hide
Query:  RLFGIELINVPAEAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHHYLQNYFN
        +LFGI L+   +    S   R     G     S+SR+ + CQYC +EFANSQALGGHQNAHKKER   K+ Q+ A      HH    + N
Subjt:  RLFGIELINVPAEAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHHYLQNYFN

Q9C9H1 Zinc finger protein GIS32.8e-0850Show/hide
Query:  RTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQA--------QNSSLIHHYLQNYFNSHFA
        R + CQYC +EF NSQALGGHQNAHKKER + K+ Q+QA         N+     +L+N   S FA
Subjt:  RTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQA--------QNSSLIHHYLQNYFNSHFA

Q9FG05 Zinc finger protein GIS27.3e-0934.82Show/hide
Query:  SFDFVSPISSTSSSSSHKKPPRLFGIEL--INVPAEAKDSPITRLCGNLGDRPMRSKSR-RTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQ
        ++DF+    + +S S  ++P RLFG E    +  +E+KD+       N  +  ++  ++ + F C YCF+ F  SQALGGHQNAHK+ER + K+  + + 
Subjt:  SFDFVSPISSTSSSSSHKKPPRLFGIEL--INVPAEAKDSPITRLCGNLGDRPMRSKSR-RTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQ

Query:  NSSLIHHYLQNY
        N++   H  QN+
Subjt:  NSSLIHHYLQNY

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 58.3e-1646.67Show/hide
Query:  VSPISSTSSSSSHKKPPRLFGIELINVPAEAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHH
        +S    +SS SS  K  +LFG ELI+     + +    +  +     +    R    CQYC KEFANSQALGGHQNAHKKERLK+K+LQ+QA+ +S I +
Subjt:  VSPISSTSSSSSHKKPPRLFGIELINVPAEAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHH

Query:  YLQNY
        YL N+
Subjt:  YLQNY

AT1G67030.1 zinc finger protein 64.7e-1144.44Show/hide
Query:  RLFGIELINVPAEAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHHYLQNYFN
        +LFGI L+   +    S   R     G     S+SR+ + CQYC +EFANSQALGGHQNAHKKER   K+ Q+ A      HH    + N
Subjt:  RLFGIELINVPAEAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHHYLQNYFN

AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein2.0e-0950Show/hide
Query:  RTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQA--------QNSSLIHHYLQNYFNSHFA
        R + CQYC +EF NSQALGGHQNAHKKER + K+ Q+QA         N+     +L+N   S FA
Subjt:  RTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQA--------QNSSLIHHYLQNYFNSHFA

AT5G01860.1 C2H2 and C2HC zinc fingers superfamily protein7.5e-0939.81Show/hide
Query:  SSTSSSSSHKKPPRLFGIELINVPAEAKDSPITRLCGN--LGDRPMRSKSR-RTFHCQYCFKEFANSQALGGHQNAHKKER---LKQKKLQIQAQNSSLI
        SS+ SSSSH+  PR  G     V AE       RL       +   R++++ R F C +C KEF+ SQALGGHQNAHK+ER    ++K+++I     S+ 
Subjt:  SSTSSSSSHKKPPRLFGIELINVPAEAKDSPITRLCGN--LGDRPMRSKSR-RTFHCQYCFKEFANSQALGGHQNAHKKER---LKQKKLQIQAQNSSLI

Query:  HHY
          Y
Subjt:  HHY

AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein5.2e-1034.82Show/hide
Query:  SFDFVSPISSTSSSSSHKKPPRLFGIEL--INVPAEAKDSPITRLCGNLGDRPMRSKSR-RTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQ
        ++DF+    + +S S  ++P RLFG E    +  +E+KD+       N  +  ++  ++ + F C YCF+ F  SQALGGHQNAHK+ER + K+  + + 
Subjt:  SFDFVSPISSTSSSSSHKKPPRLFGIEL--INVPAEAKDSPITRLCGNLGDRPMRSKSR-RTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQ

Query:  NSSLIHHYLQNY
        N++   H  QN+
Subjt:  NSSLIHHYLQNY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAACCATTCTCATTTGATTTTGTCTCTCCAATCTCCTCCACCTCCTCATCCTCCTCCCACAAGAAGCCGCCCAGACTATTCGGAATAGAACTAATCAACGTCCC
AGCAGAAGCAAAAGACTCTCCAATCACCCGCCTGTGTGGGAATCTGGGCGACAGACCAATGAGAAGCAAGAGTAGAAGAACATTCCATTGCCAATACTGCTTCAAGGAGT
TCGCAAACTCACAGGCACTGGGAGGCCACCAAAATGCCCACAAGAAGGAAAGGTTGAAGCAGAAGAAACTCCAAATACAAGCCCAAAATTCCAGCCTTATTCATCATTAC
CTTCAAAATTATTTTAATTCCCATTTTGCCCATGATTTTGATGGCTCCCACATCAGCTTCACCTTCCGTACCACCGCCGATGTAGATGACTTCCATCATAACCACTGTAC
GGTTGCCGCATCCGATCCTGCCTCTGCTGCTTCTCAATTTCATCTCTTTCCATTCCTCTAG
mRNA sequenceShow/hide mRNA sequence
AAAGAAAGTGAAATTCCCAAAATGGACAAACCATTCTCATTTGATTTTGTCTCTCCAATCTCCTCCACCTCCTCATCCTCCTCCCACAAGAAGCCGCCCAGACTATTCGG
AATAGAACTAATCAACGTCCCAGCAGAAGCAAAAGACTCTCCAATCACCCGCCTGTGTGGGAATCTGGGCGACAGACCAATGAGAAGCAAGAGTAGAAGAACATTCCATT
GCCAATACTGCTTCAAGGAGTTCGCAAACTCACAGGCACTGGGAGGCCACCAAAATGCCCACAAGAAGGAAAGGTTGAAGCAGAAGAAACTCCAAATACAAGCCCAAAAT
TCCAGCCTTATTCATCATTACCTTCAAAATTATTTTAATTCCCATTTTGCCCATGATTTTGATGGCTCCCACATCAGCTTCACCTTCCGTACCACCGCCGATGTAGATGA
CTTCCATCATAACCACTGTACGGTTGCCGCATCCGATCCTGCCTCTGCTGCTTCTCAATTTCATCTCTTTCCATTCCTCTAGTTATAATTACACTATGCCCAATGTGTGT
ATAAGTATAAGGATTTGTTCTTAAAATAAATATTTCTCTTCATTTTGTTTTTATTATTATTATTATTTTTCTTTTTTTTTCATTTCTCATACATCATCAAATCAGTAATA
TTCTCTTTTTCATTTG
Protein sequenceShow/hide protein sequence
MDKPFSFDFVSPISSTSSSSSHKKPPRLFGIELINVPAEAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHHY
LQNYFNSHFAHDFDGSHISFTFRTTADVDDFHHNHCTVAASDPASAASQFHLFPFL