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Clc09G23765 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G23765
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description26S proteasome non-ATPase regulatory subunit 10
Genome locationClcChr09:37176520..37178548
RNA-Seq ExpressionClc09G23765
SyntenyClc09G23765
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0000502 - proteasome complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002110 - Ankyrin repeat
IPR020683 - Ankyrin repeat-containing domain
IPR036770 - Ankyrin repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599031.1 Acyl-CoA-binding domain-containing protein 6, partial [Cucurbita argyrosperma subsp. sororia]7.0e-4390.74Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD
        MDMEIDASKD+ LIKDE LFKAAETGDSSAF AL+  QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQS KLINC DEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILDILLSG
Subjt:  ILDILLSG

KAG7029991.1 26S proteasome non-ATPase regulatory subunit 10, partial [Cucurbita argyrosperma subsp. argyrosperma]7.0e-4390.74Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD
        MDMEIDASKD+ LIKDE LFKAAETGDSSAF AL+  QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQS KLINC DEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILDILLSG
Subjt:  ILDILLSG

XP_022946193.1 26S proteasome non-ATPase regulatory subunit 10 [Cucurbita moschata]7.0e-4390.74Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD
        MDMEIDASKD+ LIKDE LFKAAETGDSSAF AL+  QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQS KLINC DEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILDILLSG
Subjt:  ILDILLSG

XP_022999411.1 26S proteasome non-ATPase regulatory subunit 10 [Cucurbita maxima]7.0e-4390.74Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD
        MDMEIDASKD+ LIKDE LFKAAETGDSSAF AL+  QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQS KLINC DEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILDILLSG
Subjt:  ILDILLSG

XP_038890172.1 26S proteasome non-ATPase regulatory subunit 10 [Benincasa hispida]1.3e-4490.35Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD
        MDMEID SKDV LIKDE LFKAAETGDSSAFTAL  QQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQS KLINC DEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD

Query:  ILDILLS-GANMSI
        ILDILLS GAN+++
Subjt:  ILDILLS-GANMSI

TrEMBL top hitse value%identityAlignment
A0A0A0KTY4 ANK_REP_REGION domain-containing protein5.8e-4389.81Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD
        MDMEIDASKDV LIKD  LFKAAETGDSS FTAL+  QLSQSLSLRNEDDRSLLHVAVSSGHADVVKIL TADQS K+INC DEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILDILLSG
Subjt:  ILDILLSG

A0A1S3CPG1 26S proteasome non-ATPase regulatory subunit 103.8e-4287.96Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD
        MDMEIDASKDV LI D+ LFKAAETGDSS FTAL+  QLSQSLSLRNEDDRSLLHVAVSSGHADVVKIL TADQS K+INC DEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILD LLSG
Subjt:  ILDILLSG

A0A5A7TER9 26S proteasome non-ATPase regulatory subunit 103.8e-4287.96Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD
        MDMEIDASKDV LI D+ LFKAAETGDSS FTAL+  QLSQSLSLRNEDDRSLLHVAVSSGHADVVKIL TADQS K+INC DEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILD LLSG
Subjt:  ILDILLSG

A0A6J1G342 26S proteasome non-ATPase regulatory subunit 103.4e-4390.74Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD
        MDMEIDASKD+ LIKDE LFKAAETGDSSAF AL+  QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQS KLINC DEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILDILLSG
Subjt:  ILDILLSG

A0A6J1KCY7 26S proteasome non-ATPase regulatory subunit 103.4e-4390.74Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD
        MDMEIDASKD+ LIKDE LFKAAETGDSSAF AL+  QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQS KLINC DEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILDILLSG
Subjt:  ILDILLSG

SwissProt top hitse value%identityAlignment
O75832 26S proteasome non-ATPase regulatory subunit 102.1e-0541.79Show/hide
Query:  QSLSLR-NEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSDILDILL
        +SL+ R ++D R+ LH A S+GH ++V+ L    Q    +N  D+ GW+P+H AAS GR +I+  LL
Subjt:  QSLSLR-NEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSDILDILL

Q5RJK8 Acyl-CoA-binding domain-containing protein 67.9e-0529.51Show/hide
Query:  KDEHLFKAAETGDSSAFT-ALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSDILDILL-SGANMS
        +D+++F      +    T A+ S+ +   +++ +E+ R+LLH A   GH ++VK+L   +     INC D EG   +H AA+   SDI+++LL SGA+ +
Subjt:  KDEHLFKAAETGDSSAFT-ALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSDILDILL-SGANMS

Query:  -----------ITSCSSVDMII
                   +T C +V +++
Subjt:  -----------ITSCSSVDMII

Q86YT6 E3 ubiquitin-protein ligase MIB13.0e-0441.56Show/hide
Query:  SQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSDILDILL-SGANMSITS
        S  L+ RN+  ++ LH+AV+ GH  VVK L        L    D EG  P+H A S  R DIL +LL +GA+++IT+
Subjt:  SQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSDILDILL-SGANMSITS

Q9Z2X2 26S proteasome non-ATPase regulatory subunit 102.7e-0539.19Show/hide
Query:  QSLSLR-NEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSDILD-ILLSGANMS
        +SL+ R ++D R+ LH A S+GH ++V+ L    Q    +N  D+ GW+P+H AAS GR +I+  +L+ GA+++
Subjt:  QSLSLR-NEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSDILD-ILLSGANMS

Q9Z2X3 26S proteasome non-ATPase regulatory subunit 103.5e-0539.19Show/hide
Query:  QSLSLR-NEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSDILD-ILLSGANMS
        +SL+ R ++D R+ LH A S+GH ++V+ L    Q    +N  D+ GW+P+H AAS GR +I+  +L+ GA ++
Subjt:  QSLSLR-NEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSDILD-ILLSGANMS

Arabidopsis top hitse value%identityAlignment
AT2G03430.1 Ankyrin repeat family protein7.5e-2753.1Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD
        M++  D +K    ++DE LFKAAE GDSS F +LS +QLS+SL+ RNED RSLLHVA S GH+ +VK+L+++D++  +IN  D+EGWAP+HSAASIG ++
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSD

Query:  ILDILLS-GANMS
        ++++LL+ GA+++
Subjt:  ILDILLS-GANMS

AT3G01750.1 Ankyrin repeat family protein6.8e-0430.61Show/hide
Query:  LSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSDILDILLSGANMSITSCSSVDMIIASSNSKET
        LS   +   L+ R++   ++LH A   G   VVK L  +  S  L++ VD +G   +H AA  G +D++D+L+S         +S  +I A +N+ +T
Subjt:  LSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSDILDILLSGANMSITSCSSVDMIIASSNSKET

AT3G09550.1 Ankyrin repeat family protein6.8e-0431.46Show/hide
Query:  LFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSDILDILLS
        LF AAE G+      L      +SL  +N      LH+A S GH  +V++L   +   +L   V +    P+ SAA+ G S++++ LL+
Subjt:  LFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSDILDILLS

AT5G12320.1 ankyrin repeat family protein3.1e-0431Show/hide
Query:  KDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSDILD-ILLSGANMSI
        K + L +AA   D      L+S  L  SL  R+   R+ LH+A ++GH  +V+ L +       IN +++E  AP+H A   G  +++  ++L+GA++S+
Subjt:  KDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSDILD-ILLSGANMSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATGGAAATCGATGCTTCCAAAGATGTTCCTCTAATCAAAGATGAACATCTTTTCAAAGCCGCAGAGACCGGCGATTCTTCCGCTTTCACTGCCCTCTCATCACA
ACAGCTTTCTCAATCTCTCTCCCTAAGAAATGAGGATGACCGCTCTCTTCTCCATGTTGCCGTCTCTTCAGGCCACGCCGATGTGGTAAAGATACTGGCTACTGCTGATC
AGTCTGCTAAATTAATTAACTGCGTTGATGAGGAAGGTTGGGCACCGATTCATTCTGCTGCTAGCATTGGGAGGTCTGATATTTTAGATATATTGTTGAGCGGAGCAAAT
ATGAGTATCACAAGTTGTAGTAGTGTTGATATGATCATAGCCTCATCTAACTCTAAGGAGACAAATTGTAAGAGAAGGAGCACAAAGGCGAAACTCTGCCACACCACTGG
GCGCCACTCCACTAGGCCACTTGTGCAAGCTTGCCCATGTAGGCATGAATCTCACCATGCATACCAGCTCGCTTGCATGCATGCCAAGTTGTGCCCCACAAGCATGCACT
CGTACAAGTTGTGTGTAGACAAGCATGCCTCATGGAGCATGCATGACCTTCGCCTTAGAGGCTAG
mRNA sequenceShow/hide mRNA sequence
CAGATATTTGGAAATTACATATACCAAAACCTTTAAACCTTGATTTGATGCGGCCAAATTGTACTCTGTTGTAGGAAGTACAGAGAACGACGCTCCATTTCGGGCTCGGC
GGTTTGAGAGGTTGTTGTCCAATCTTAACCTTCAAGTTCTTGAAATCCATGGATATGGAAATCGATGCTTCCAAAGATGTTCCTCTAATCAAAGATGAACATCTTTTCAA
AGCCGCAGAGACCGGCGATTCTTCCGCTTTCACTGCCCTCTCATCACAACAGCTTTCTCAATCTCTCTCCCTAAGAAATGAGGATGACCGCTCTCTTCTCCATGTTGCCG
TCTCTTCAGGCCACGCCGATGTGGTAAAGATACTGGCTACTGCTGATCAGTCTGCTAAATTAATTAACTGCGTTGATGAGGAAGGTTGGGCACCGATTCATTCTGCTGCT
AGCATTGGGAGGTCTGATATTTTAGATATATTGTTGAGCGGAGCAAATATGAGTATCACAAGTTGTAGTAGTGTTGATATGATCATAGCCTCATCTAACTCTAAGGAGAC
AAATTGTAAGAGAAGGAGCACAAAGGCGAAACTCTGCCACACCACTGGGCGCCACTCCACTAGGCCACTTGTGCAAGCTTGCCCATGTAGGCATGAATCTCACCATGCAT
ACCAGCTCGCTTGCATGCATGCCAAGTTGTGCCCCACAAGCATGCACTCGTACAAGTTGTGTGTAGACAAGCATGCCTCATGGAGCATGCATGACCTTCGCCTTAGAGGC
TAG
Protein sequenceShow/hide protein sequence
MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSAKLINCVDEEGWAPIHSAASIGRSDILDILLSGAN
MSITSCSSVDMIIASSNSKETNCKRRSTKAKLCHTTGRHSTRPLVQACPCRHESHHAYQLACMHAKLCPTSMHSYKLCVDKHASWSMHDLRLRG