; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G23770 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G23770
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRING-type domain-containing protein
Genome locationClcChr09:37182627..37185567
RNA-Seq ExpressionClc09G23770
SyntenyClc09G23770
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR027370 - RING-type zinc-finger, LisH dimerisation motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599030.1 hypothetical protein SDJN03_08808, partial [Cucurbita argyrosperma subsp. sororia]2.1e-10381.38Show/hide
Query:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH
        MWKLASNA AGIRSK NSA  K  FWECSDD+VCSE S DEELECPICWESFNIVENVPYVLWCGH+LC+NCVLGLQG VLKLATRQIRIPIFISCPWCH
Subjt:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH

Query:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSL-PSDTDTSE----------------RRRLFFYNHLDCLFHLIFKFLLVVIF
        QLSLRVVYKGNLKFPSKNFFLLWMVES NGNEGKLDH FN DNQPVFSL PSD D S+                RRRLF Y HLDC+ HLIFKFLL VIF
Subjt:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSL-PSDTDTSE----------------RRRLFFYNHLDCLFHLIFKFLLVVIF

Query:  LLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEV
        +LIVVFVIPGSALILLLYLLIT LFALPSLLIFY++LHALEKLMN++
Subjt:  LLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEV

XP_008465708.1 PREDICTED: uncharacterized protein LOC103503329 [Cucumis melo]2.8e-11190.87Show/hide
Query:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH
        MWKLASNAIAGIRSKKNS   K VFWECSDD+VCSE+S DEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQ+RIPI ISCPWCH
Subjt:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH

Query:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDTSERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLL
        QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFN DNQ VFSLPS T TSERRRLFFYNHLDC+ HL+FKFLL VIF+LIVVFVIPGSALILLL
Subjt:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDTSERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLL

Query:  YLLITLLFALPSLLIFYLALHALEKLMNEV
        YLLITLLFALPSLLIFYLALHAL+KLMN++
Subjt:  YLLITLLFALPSLLIFYLALHALEKLMNEV

XP_011655300.2 uncharacterized protein LOC101218619 [Cucumis sativus]1.3e-10888.89Show/hide
Query:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH
        MWKLASNAIAGIRSKKNS   K VFWECSDD+ CSE+S DEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPI ISCPWCH
Subjt:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH

Query:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTD----TSERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSAL
        QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFN DN P+FSLPS T     TSERRRLFFYNHLD + HLIFKFLL+VIF+LIVVFVIPGSAL
Subjt:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTD----TSERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSAL

Query:  ILLLYLLITLLFALPSLLIFYLALHALEKLMNEV
        ILLLYLLITLLFALPSLLIFYLA HALEKLMN++
Subjt:  ILLLYLLITLLFALPSLLIFYLALHALEKLMNEV

XP_022946373.1 uncharacterized protein LOC111450453 [Cucurbita moschata]2.1e-10381.38Show/hide
Query:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH
        MWKLASNA AGIRSK NSA  K  FWECSDD+VCSE S DEELECPICWESFNIVENVPYVLWCGH+LC+NCVLGLQG VLKLATRQIRIPIFISCPWCH
Subjt:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH

Query:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSL-PSDTDTSE----------------RRRLFFYNHLDCLFHLIFKFLLVVIF
        QLSLRVVYKGNLKFPSKNFFLLWMVES NGNEGKLDH FN DNQPVFSL PSD D S+                RRRLF Y HLDC+ HLIFKFLL VIF
Subjt:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSL-PSDTDTSE----------------RRRLFFYNHLDCLFHLIFKFLLVVIF

Query:  LLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEV
        +LIVVFVIPGSALILLLYLLIT LFALPSLLIFY++LHALEKLMN++
Subjt:  LLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEV

XP_038890517.1 uncharacterized protein LOC120080047 [Benincasa hispida]4.0e-11089.74Show/hide
Query:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH
        MWKLASNAIAGIR KKNS   K VFWECSDD+VCSE+S DEELECPICWESFN+VENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIF+SCPWCH
Subjt:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH

Query:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDT----SERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSAL
        QLSLRVVY+GNLKFPSKNFFLLWMVESFNGNEGK DHSFN DNQPVFSLPS+TDT    SERRRLFFYNHLD + HLIFKFLLVVIFLLIVVFVIPGSAL
Subjt:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDT----SERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSAL

Query:  ILLLYLLITLLFALPSLLIFYLALHALEKLMNEV
        ILLLYLLITLL ALPSLLIFYLALHALEKLMN++
Subjt:  ILLLYLLITLLFALPSLLIFYLALHALEKLMNEV

TrEMBL top hitse value%identityAlignment
A0A1S3CPH8 uncharacterized protein LOC1035033291.3e-11190.87Show/hide
Query:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH
        MWKLASNAIAGIRSKKNS   K VFWECSDD+VCSE+S DEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQ+RIPI ISCPWCH
Subjt:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH

Query:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDTSERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLL
        QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFN DNQ VFSLPS T TSERRRLFFYNHLDC+ HL+FKFLL VIF+LIVVFVIPGSALILLL
Subjt:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDTSERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLL

Query:  YLLITLLFALPSLLIFYLALHALEKLMNEV
        YLLITLLFALPSLLIFYLALHAL+KLMN++
Subjt:  YLLITLLFALPSLLIFYLALHALEKLMNEV

A0A5A7TGX0 Zf-RING_LisH domain-containing protein1.3e-11190.87Show/hide
Query:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH
        MWKLASNAIAGIRSKKNS   K VFWECSDD+VCSE+S DEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQ+RIPI ISCPWCH
Subjt:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH

Query:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDTSERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLL
        QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFN DNQ VFSLPS T TSERRRLFFYNHLDC+ HL+FKFLL VIF+LIVVFVIPGSALILLL
Subjt:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDTSERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLL

Query:  YLLITLLFALPSLLIFYLALHALEKLMNEV
        YLLITLLFALPSLLIFYLALHAL+KLMN++
Subjt:  YLLITLLFALPSLLIFYLALHALEKLMNEV

A0A6J1D940 uncharacterized protein LOC1110185022.0e-9978.46Show/hide
Query:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH
        MWKLASNAIAGIR +KNS   K VFWECSDD+VCSE+S DE LECPICWESFNIVEN+PYVLWCGH+LCKNCVLGLQGSVLK+ATRQIR+PI ISCPWCH
Subjt:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH

Query:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDT----------------SERRRLFFYNHLDCLFHLIFKFLLVVIFL
        QLSLR+VYKGNLKFPSKNFFLLWMVESFN +EGKLDHSFN DNQPVF LPSDT+T                  RR LF Y +LD L HLI KFLLVVIFL
Subjt:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDT----------------SERRRLFFYNHLDCLFHLIFKFLLVVIFL

Query:  LIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEV
        LIVVFVIPGSA+ILLLYLLIT LFALPSLL+FYLALHALE+LM+++
Subjt:  LIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEV

A0A6J1G3L5 uncharacterized protein LOC1114504531.0e-10381.38Show/hide
Query:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH
        MWKLASNA AGIRSK NSA  K  FWECSDD+VCSE S DEELECPICWESFNIVENVPYVLWCGH+LC+NCVLGLQG VLKLATRQIRIPIFISCPWCH
Subjt:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH

Query:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSL-PSDTDTSE----------------RRRLFFYNHLDCLFHLIFKFLLVVIF
        QLSLRVVYKGNLKFPSKNFFLLWMVES NGNEGKLDH FN DNQPVFSL PSD D S+                RRRLF Y HLDC+ HLIFKFLL VIF
Subjt:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSL-PSDTDTSE----------------RRRLFFYNHLDCLFHLIFKFLLVVIF

Query:  LLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEV
        +LIVVFVIPGSALILLLYLLIT LFALPSLLIFY++LHALEKLMN++
Subjt:  LLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEV

A0A6J1KAL8 uncharacterized protein LOC1114937433.0e-10382.19Show/hide
Query:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH
        MWKLASNA AGIRSK NSA  K  FWECSDD+VCSE S DEELECPICWESFNIVENVPYVLWCGH+LC+NCVLGLQG VLKLATRQIRIPIFISCPWCH
Subjt:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH

Query:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSL-PSDTDTSER--------------RR--LFFYNHLDCLFHLIFKFLLVVIF
        QLSLRVVYKGNLKFPSKNFFLLWMVES NGNEGKLDH FN DNQPVFSL PSD D S+R              RR  LF Y HLDCL HLIFKFLLVVIF
Subjt:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSL-PSDTDTSER--------------RR--LFFYNHLDCLFHLIFKFLLVVIF

Query:  LLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEV
        +LIVVFVIPGSALILLLYLLIT LFALPSLLIFY++LHALEKLMN++
Subjt:  LLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEV

SwissProt top hitse value%identityAlignment
Q13049 E3 ubiquitin-protein ligase TRIM321.8e-0434.92Show/hide
Query:  EELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLS
        E LECPIC ESF   +  P +L CGH++C+ C+  L  S +            + CP+C +++
Subjt:  EELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLS

Q8CH72 E3 ubiquitin-protein ligase TRIM321.8e-0434.92Show/hide
Query:  EELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLS
        E LECPIC ESF   +  P +L CGH++C+ C+  L  S +            + CP+C +++
Subjt:  EELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLS

Q8K0W3 RING finger protein 2081.3e-0540.98Show/hide
Query:  EELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQ
        E LECP C  ++N+ +  P VL C HS+C+ C+  L  S  K          FISCP CH+
Subjt:  EELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQ

Q96D59 E3 ubiquitin-protein ligase RNF1834.0e-0438.24Show/hide
Query:  SESSGDE-ELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQ
        +E  G E E ECP+CW  FN   + P +L C HS C  C+  L  S++  A R+      + CP C Q
Subjt:  SESSGDE-ELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQ

Q9H0X6 RING finger protein 2081.6e-0538.81Show/hide
Query:  SESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQ
        S ++  E LECP C  S+N+ +  P VL C HS+C+ C+  L  S  K          FISCP C +
Subjt:  SESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQ

Arabidopsis top hitse value%identityAlignment
AT1G21651.1 zinc ion binding3.7e-0537.29Show/hide
Query:  EELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWC
        EE ECP+C +S++    VP VL CGH+ C+ C+  L            + P  I CP C
Subjt:  EELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWC

AT1G69330.1 RING/U-box superfamily protein4.5e-5949.81Show/hide
Query:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH
        MW  ASN I  +  KK+  +      +CSDD+V + S  +E LECPICWESFNIVENVPYVLWCGH+LC+NCV GLQ +VL+L+++ IRIP F+SCPWC 
Subjt:  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH

Query:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNG---------NEGKL------------------DHSFNED--------NQPVFSLP-SDTDTSERRRLF-F
         LS R+VYKGNLKFP KNFFLLWMVES NG         + G L                  +HS N +        NQ    LP  D      R+LF F
Subjt:  QLSLRVVYKGNLKFPSKNFFLLWMVESFNG---------NEGKL------------------DHSFNED--------NQPVFSLP-SDTDTSERRRLF-F

Query:  YNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEV
        +  LD       KF  V+IFLLIV F IPGS +IL LY L+T+LFA+P+ L+ Y A   LE+L+NE+
Subjt:  YNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEV

AT1G74370.1 RING/U-box superfamily protein9.4e-4141.06Show/hide
Query:  MWKLASNAI-AGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGS-VLKLATRQIRIPIFISCPW
        MW LAS +I  G  SK   A  KP            +++ +E+LECPICWESFN+VENVPYVLWCGH++CK C+LGLQ + V+K +    ++P F++CPW
Subjt:  MWKLASNAI-AGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGS-VLKLATRQIRIPIFISCPW

Query:  CHQLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFS---------------LPSDTDTSERR-------RLFF---------YNHL
        C+ LSLR+V  G ++FPSKNF+LLWMVES NG+  +       DN+ V S                  D    + R       R FF            +
Subjt:  CHQLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFS---------------LPSDTDTSERR-------RLFF---------YNHL

Query:  DCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEV
          + HL+ KF LVVIFLL+ ++ IP SA +L +Y  +T   A+PS L+ Y A  +L  L+ E+
Subjt:  DCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEV

AT3G29270.1 RING/U-box superfamily protein1.4e-5549.24Show/hide
Query:  RMWKLASNAIAGIRSKKNSAECKPV--FWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCP
        RMW LAS+ + G    KN    +PV    ECSDDDV S  S DE LECPICWESFNIVENVPYVLWCGH++CKNC+LGLQ +++KL T  +++P+FISCP
Subjt:  RMWKLASNAIAGIRSKKNSAECKPV--FWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCP

Query:  WCHQLSLRVVYKGNLKFPSKNFFLLWMVESFNG----------NEGKLD----------HSFNEDNQPVFS-------LPSDT-DTSERRRLFFYNHLDC
        WC+ LS R+V++G L+FP KN+F+LWMVE  NG           +G  D          H+ +  +QP  S       +P D   TS R+ L F+     
Subjt:  WCHQLSLRVVYKGNLKFPSKNFFLLWMVESFNG----------NEGKLD----------HSFNEDNQPVFS-------LPSDT-DTSERRRLFFYNHLDC

Query:  LFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEVI
           L  KF LVVIFLLI+++ IP SA IL +Y+L+TLL ALPS LI Y A   L+ L+ E++
Subjt:  LFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEVI

AT3G29270.2 RING/U-box superfamily protein1.4e-5549.24Show/hide
Query:  RMWKLASNAIAGIRSKKNSAECKPV--FWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCP
        RMW LAS+ + G    KN    +PV    ECSDDDV S  S DE LECPICWESFNIVENVPYVLWCGH++CKNC+LGLQ +++KL T  +++P+FISCP
Subjt:  RMWKLASNAIAGIRSKKNSAECKPV--FWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCP

Query:  WCHQLSLRVVYKGNLKFPSKNFFLLWMVESFNG----------NEGKLD----------HSFNEDNQPVFS-------LPSDT-DTSERRRLFFYNHLDC
        WC+ LS R+V++G L+FP KN+F+LWMVE  NG           +G  D          H+ +  +QP  S       +P D   TS R+ L F+     
Subjt:  WCHQLSLRVVYKGNLKFPSKNFFLLWMVESFNG----------NEGKLD----------HSFNEDNQPVFS-------LPSDT-DTSERRRLFFYNHLDC

Query:  LFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEVI
           L  KF LVVIFLLI+++ IP SA IL +Y+L+TLL ALPS LI Y A   L+ L+ E++
Subjt:  LFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGTTCATCCACTTTCTCTAAAGATGAACATCTATTTTGCAGATGTCCTGTCCGTAGCATATCGAAACAGTTCTTCTGTCAGGATGTGGAAGTTGGCATCGAACGC
CATTGCTGGCATTCGATCTAAGAAAAACTCAGCTGAATGTAAGCCAGTTTTCTGGGAATGCTCGGATGACGATGTTTGCTCGGAAAGCAGTGGAGATGAAGAACTGGAAT
GCCCTATTTGCTGGGAATCCTTTAACATTGTGGAGAATGTACCTTATGTCTTATGGTGTGGCCATTCCTTGTGCAAAAATTGTGTATTAGGGCTTCAAGGGTCTGTGCTG
AAACTAGCAACTCGCCAAATCCGAATCCCGATCTTCATTTCGTGCCCTTGGTGTCATCAGCTATCGCTAAGGGTGGTATACAAGGGAAACCTGAAGTTTCCCAGCAAGAA
CTTTTTTCTTCTTTGGATGGTTGAGAGCTTTAATGGTAATGAGGGAAAACTTGACCATTCCTTCAATGAGGATAATCAACCAGTTTTTTCTCTGCCATCCGATACCGATA
CTTCTGAGAGGCGGCGATTGTTTTTCTATAATCATTTGGATTGCCTCTTCCATTTAATCTTCAAGTTTCTACTGGTTGTCATATTTCTTCTCATAGTTGTTTTTGTAATC
CCTGGAAGTGCACTCATCTTGCTGCTCTACCTCCTAATCACTTTACTTTTTGCATTACCATCTTTGCTGATATTTTATCTTGCACTCCATGCTTTGGAAAAGCTTATGAA
TGAAGTAATCTGGAATTCTATATCTGAGCATAGGTTCCCTGGTTTGGTTGATTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAGAAAAAAGGAAAAAAATCTGTATTGGAAACCTTCTTCATCCACTCTCCTCCAAAACGCAATCGGCATCCTCGACGTTGGTTTGGCGGAGAGAAAACGAAGGGGGA
AGATCGCGACCTTCCTCCTCAATGCTTTTCTGATCTTCTTATCCTTTTCTGAATCCTTCCCATATTCATCCAAATGCATGTTCATCCACTTTCTCTAAAGATGAACATCT
ATTTTGCAGATGTCCTGTCCGTAGCATATCGAAACAGTTCTTCTGTCAGGATGTGGAAGTTGGCATCGAACGCCATTGCTGGCATTCGATCTAAGAAAAACTCAGCTGAA
TGTAAGCCAGTTTTCTGGGAATGCTCGGATGACGATGTTTGCTCGGAAAGCAGTGGAGATGAAGAACTGGAATGCCCTATTTGCTGGGAATCCTTTAACATTGTGGAGAA
TGTACCTTATGTCTTATGGTGTGGCCATTCCTTGTGCAAAAATTGTGTATTAGGGCTTCAAGGGTCTGTGCTGAAACTAGCAACTCGCCAAATCCGAATCCCGATCTTCA
TTTCGTGCCCTTGGTGTCATCAGCTATCGCTAAGGGTGGTATACAAGGGAAACCTGAAGTTTCCCAGCAAGAACTTTTTTCTTCTTTGGATGGTTGAGAGCTTTAATGGT
AATGAGGGAAAACTTGACCATTCCTTCAATGAGGATAATCAACCAGTTTTTTCTCTGCCATCCGATACCGATACTTCTGAGAGGCGGCGATTGTTTTTCTATAATCATTT
GGATTGCCTCTTCCATTTAATCTTCAAGTTTCTACTGGTTGTCATATTTCTTCTCATAGTTGTTTTTGTAATCCCTGGAAGTGCACTCATCTTGCTGCTCTACCTCCTAA
TCACTTTACTTTTTGCATTACCATCTTTGCTGATATTTTATCTTGCACTCCATGCTTTGGAAAAGCTTATGAATGAAGTAATCTGGAATTCTATATCTGAGCATAGGTTC
CCTGGTTTGGTTGATTGA
Protein sequenceShow/hide protein sequence
MHVHPLSLKMNIYFADVLSVAYRNSSSVRMWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVL
KLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDTSERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVI
PGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNEVIWNSISEHRFPGLVD