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Clc09G24445 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G24445
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDefensin-like protein 3
Genome locationClcChr09:37723135..37723462
RNA-Seq ExpressionClc09G24445
SyntenyClc09G24445
Gene Ontology termsGO:0006952 - defense response (biological process)
InterPro domainsIPR008176 - Defensin, plant
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHA50469.1 defensin-like protein 3 [Citrullus lanatus]1.6e-34100Show/hide
Query:  MAGSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCDGFCNHGSCICTVPC
        MAGSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCDGFCNHGSCICTVPC
Subjt:  MAGSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCDGFCNHGSCICTVPC

KAA0062794.1 defensin-like protein 3 [Cucumis melo var. makuwa]2.5e-1655.26Show/hide
Query:  MAGSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCD------GFCNHGSCICTVPC
        MAG   W+KLT V F+FLS+ASGWM+ ETEG+ C++ SPSFKG+C+S+++C+  CD      G C++G CICTV C
Subjt:  MAGSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCD------GFCNHGSCICTVPC

KAA0062795.1 defensin-like protein 3 [Cucumis melo var. makuwa]3.4e-2172.06Show/hide
Query:  GSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCDGFCNHGSCICTVPC
        G E  RKLT+VL I LS+ASGWMVAETEGR C+RP P+ KG CSSDEDCI VCDGFC+ G C+C VPC
Subjt:  GSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCDGFCNHGSCICTVPC

XP_031744629.1 defensin-1-like [Cucumis sativus]2.5e-2478.79Show/hide
Query:  EEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCDGFCNHGSCICTVPC
        E WRKLT+VLFI LSLASGWMVAETEGR CYRPSP  KG CSS++DCI VCDGFC+HG C+C VPC
Subjt:  EEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCDGFCNHGSCICTVPC

XP_038887289.1 defensin-like protein 2 [Benincasa hispida]5.4e-1960.53Show/hide
Query:  MAGSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCD------GFCNHGSCICTVPC
        MAG E WRKLT+VLFIFL+LASGWMV ETEG+ C++ SPSF+G+C+S+ +C+G CD      G+C++G CIC V C
Subjt:  MAGSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCD------GFCNHGSCICTVPC

TrEMBL top hitse value%identityAlignment
A0A0A0K447 Uncharacterized protein9.6e-1453.25Show/hide
Query:  MAGSEEWRKLTIVLFIF-LSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVC------DGFCNHGSCICTVPC
        MAG   W+KLT V FIF L++ASGWM+ ET G+ C++ S SFKG+C S+++C+  C      DGFC++G CICTV C
Subjt:  MAGSEEWRKLTIVLFIF-LSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVC------DGFCNHGSCICTVPC

A0A5A7V3H5 Defensin-like protein 31.6e-1353.33Show/hide
Query:  GSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVC-------DGFCNHGSCICTVPC
        G E  RKLT+V+ IFL  ASGWMV +TEG  CY+PS +F+G C+S E+C  VC       DGFC+   CICT  C
Subjt:  GSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVC-------DGFCNHGSCICTVPC

A0A5D3BCI9 Defensin-like protein 31.2e-1655.26Show/hide
Query:  MAGSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCD------GFCNHGSCICTVPC
        MAG   W+KLT V F+FLS+ASGWM+ ETEG+ C++ SPSFKG+C+S+++C+  CD      G C++G CICTV C
Subjt:  MAGSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCD------GFCNHGSCICTVPC

A0A5D3BEY4 Defensin-like protein 31.6e-2172.06Show/hide
Query:  GSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCDGFCNHGSCICTVPC
        G E  RKLT+VL I LS+ASGWMVAETEGR C+RP P+ KG CSSDEDCI VCDGFC+ G C+C VPC
Subjt:  GSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCDGFCNHGSCICTVPC

W5RQN1 Defensin-like protein 37.6e-35100Show/hide
Query:  MAGSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCDGFCNHGSCICTVPC
        MAGSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCDGFCNHGSCICTVPC
Subjt:  MAGSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCDGFCNHGSCICTVPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGATCAGAAGAATGGAGAAAGCTCACAATTGTGTTGTTCATCTTCCTATCCCTTGCTTCTGGATGGATGGTGGCGGAGACGGAAGGAAGGGCTTGCTACCGGCC
GAGCCCGTCGTTCAAGGGACGGTGTAGTTCGGATGAAGATTGTATTGGAGTTTGCGACGGATTTTGCAACCATGGTTCGTGCATCTGTACTGTGCCTTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGATCAGAAGAATGGAGAAAGCTCACAATTGTGTTGTTCATCTTCCTATCCCTTGCTTCTGGATGGATGGTGGCGGAGACGGAAGGAAGGGCTTGCTACCGGCC
GAGCCCGTCGTTCAAGGGACGGTGTAGTTCGGATGAAGATTGTATTGGAGTTTGCGACGGATTTTGCAACCATGGTTCGTGCATCTGTACTGTGCCTTGCTGA
Protein sequenceShow/hide protein sequence
MAGSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCDGFCNHGSCICTVPC