; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G00170 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G00170
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRING-H2 finger protein ATL80
Genome locationClcChr10:240974..241884
RNA-Seq ExpressionClc10G00170
SyntenyClc10G00170
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637404.1 hypothetical protein CSA_023381 [Cucumis sativus]1.8e-8287.17Show/hide
Query:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICL
        M+ + +AL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     GNQASANRGLKKKILQSLPKFRYKST G+GKIAAECAICL
Subjt:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICL

Query:  AEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVED------NNRGLGFLP
        AEF+EGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPA VQGG AHNN EEEEVED      NNRGLGFLP
Subjt:  AEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVED------NNRGLGFLP

XP_004146217.1 RING-H2 finger protein ATL80 [Cucumis sativus]5.6e-8488.77Show/hide
Query:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICL
        M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     GNQASANRGLKKKILQSLPKFRYKST G+GKIAAECAICL
Subjt:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICL

Query:  AEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVED------NNRGLGFLP
        AEF+EGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPA VQGG AHNN EEEEVED      NNRGLGFLP
Subjt:  AEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVED------NNRGLGFLP

XP_008449155.1 PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo]1.5e-8490.76Show/hide
Query:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICL
        M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     GNQASANRGLKKKILQSLPKFRYKST G+GKIAAECAICL
Subjt:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICL

Query:  AEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDN---NRGLGFLP
        AEF+EGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPAVVQGGAA NN EEEEVEDN   NRGLGFLP
Subjt:  AEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDN---NRGLGFLP

XP_023539225.1 RING-H2 finger protein ATL8 [Cucurbita pepo subsp. pepo]4.6e-7880.41Show/hide
Query:  MTRYIRALAANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGSVGNQASANRGLKKKILQSLPKFRYKS--TGGEG
        MTRY +ALA NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRG   G  GNQASANRGLKKKILQSLPKF Y++  +GGEG
Subjt:  MTRYIRALAANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGSVGNQASANRGLKKKILQSLPKFRYKS--TGGEG

Query:  KIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVED---NNRGLGFLP
        K AAECAICLAEF++GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG+FPAVV GG  +N EE++  ED   NNRGLGFLP
Subjt:  KIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVED---NNRGLGFLP

XP_038904164.1 RING-H2 finger protein ATL80-like [Benincasa hispida]5.6e-9295.03Show/hide
Query:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICL
        MTRYIRALA NTS APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRGGGS GNQASANRGLKKKILQSLPKF+YKSTGGEGKIAAECAICL
Subjt:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICL

Query:  AEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDNNRGLGFLP
        AEF+EGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNN   EEVEDNNRGLGFLP
Subjt:  AEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDNNRGLGFLP

TrEMBL top hitse value%identityAlignment
A0A0A0L622 RING-type domain-containing protein2.7e-8488.77Show/hide
Query:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICL
        M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     GNQASANRGLKKKILQSLPKFRYKST G+GKIAAECAICL
Subjt:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICL

Query:  AEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVED------NNRGLGFLP
        AEF+EGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPA VQGG AHNN EEEEVED      NNRGLGFLP
Subjt:  AEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVED------NNRGLGFLP

A0A1S3BKT0 RING-H2 finger protein ATL807.1e-8590.76Show/hide
Query:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICL
        M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     GNQASANRGLKKKILQSLPKFRYKST G+GKIAAECAICL
Subjt:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICL

Query:  AEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDN---NRGLGFLP
        AEF+EGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPAVVQGGAA NN EEEEVEDN   NRGLGFLP
Subjt:  AEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDN---NRGLGFLP

A0A5D3CJ22 RING-H2 finger protein ATL807.1e-8590.76Show/hide
Query:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICL
        M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     GNQASANRGLKKKILQSLPKFRYKST G+GKIAAECAICL
Subjt:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICL

Query:  AEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDN---NRGLGFLP
        AEF+EGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPAVVQGGAA NN EEEEVEDN   NRGLGFLP
Subjt:  AEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDN---NRGLGFLP

A0A6J1F5B4 RING-H2 finger protein ATL81.4e-7779.9Show/hide
Query:  MTRYIRALAANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGSVGNQASANRGLKKKILQSLPKFRYKS--TGGEG
        MTRY +ALA NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRG  GG  GNQASANRGLKKKILQSLPKF Y++  +GGE 
Subjt:  MTRYIRALAANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGSVGNQASANRGLKKKILQSLPKFRYKS--TGGEG

Query:  KIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVED---NNRGLGFLP
        K AAECAICLAEF++GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG+FPAVV GG  ++ EE++  ED   NNRGLGFLP
Subjt:  KIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVED---NNRGLGFLP

A0A6J1I6T7 RING-H2 finger protein ATL82.9e-7880.41Show/hide
Query:  MTRYIRALAANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGSVGNQASANRGLKKKILQSLPKFRYKS--TGGEG
        MTRY++ALA NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRG  GG  GNQASANRGLKKKILQSLPKF Y++  +GGEG
Subjt:  MTRYIRALAANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGSVGNQASANRGLKKKILQSLPKFRYKS--TGGEG

Query:  KIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVED---NNRGLGFLP
        K AAECAICLAEF++GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG FPAVV G   +N EE++  ED   NNRGLGFLP
Subjt:  KIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVED---NNRGLGFLP

SwissProt top hitse value%identityAlignment
O22755 Probable E3 ubiquitin-protein ligase ATL446.7e-4052.81Show/hide
Query:  MTRYIRALAANTSSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRY---KSTGG---EG
        MTR  R L    ++APPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR     G+  S N+GLKKK LQSLP+  +   +ST G   E 
Subjt:  MTRYIRALAANTSSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRY---KSTGG---EG

Query:  KIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEE
          + ECAICL +F +GEEIR LP CGH FHV C+D WL S SSCPSCR+IL   RC +CG          AH ++  +
Subjt:  KIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEE

Q8LC69 RING-H2 finger protein ATL85.9e-4451.85Show/hide
Query:  MTRYIRALAANTSSAPPPEA-VALESDFVVILAALLCALICMVGLIAVARCAWLRR-GGGSVGNQ------ASANRGLKKKILQSLPKFRYKSTGGEGKI
        M R +  L    +S  P EA     SD V+ILA LLCAL C++GLIAV+RCAWLRR    +  +Q      A+AN+GLKKK+L+SLPK  Y       + 
Subjt:  MTRYIRALAANTSSAPPPEA-VALESDFVVILAALLCALICMVGLIAVARCAWLRR-GGGSVGNQ------ASANRGLKKKILQSLPKFRYKSTGGEGKI

Query:  AAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDNNRGLGFLP
          ECAICL EF  G+E+R LPQCGH FHVSC+DTWLGSHSSCPSCRQILVV RC KCG  P    G ++   E +  ++    G   LP
Subjt:  AAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDNNRGLGFLP

Q9LM69 RING-H2 finger protein ATL809.6e-4756.45Show/hide
Query:  MTRYIRALAANTSSAPPP---EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR---GGGSV-GNQ--------ASANRGLKKKILQSLPKFRYKS
        M R +  L   +++  P       AL SD VVILAALLCALIC++GLIAV+RC WLRR   G  +V G+Q        A+AN+GLKKK+LQSLPK  +  
Subjt:  MTRYIRALAANTSSAPPP---EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR---GGGSV-GNQ--------ASANRGLKKKILQSLPKFRYKS

Query:  TGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVE
           E +  AECAICLAEF  G+E+R LPQCGH FHV+C+DTWLGSHSSCPSCRQILVVARC KCG  P    G ++   E E E+E
Subjt:  TGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVE

Q9LZV8 RING-H2 finger protein ATL741.6e-2553.23Show/hide
Query:  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASA----NRGLKKKILQSLPKFRYKSTGGEGKIAA-ECAICLAEFMEGEEIRQLPQCGHC
        +++ V+ILAALLCALI  +GL ++ RCA +R G G   + A+       GLKK+ L+  P   Y S  GE KIAA ECAICL EF +GE +R LP C H 
Subjt:  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASA----NRGLKKKILQSLPKFRYKSTGGEGKIAA-ECAICLAEFMEGEEIRQLPQCGHC

Query:  FHVSCVDTWLGSHSSCPSCRQILV
        FH+SC+DTWL SHSSCP+CR  L+
Subjt:  FHVSCVDTWLGSHSSCPSCRQILV

Q9ZT49 Probable E3 ubiquitin-protein ligase ATL453.6e-4152.84Show/hide
Query:  MTRYIRALAANTSSAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRRGGG----SVGNQASANRGLKKKILQSLPKFRYK-----------
        MTR  R L   T+S PPPE + A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR  G    +VG     N+GLKKK LQ+LPK  Y            
Subjt:  MTRYIRALAANTSSAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRRGGG----SVGNQASANRGLKKKILQSLPKFRYK-----------

Query:  ---STGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQ
           S+ G+G  + ECAIC+ EF EGEEIR LP C H FHV+C+D WL S SSCPSCR+ILV  +C +CG   +  +
Subjt:  ---STGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQ

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein6.9e-4856.45Show/hide
Query:  MTRYIRALAANTSSAPPP---EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR---GGGSV-GNQ--------ASANRGLKKKILQSLPKFRYKS
        M R +  L   +++  P       AL SD VVILAALLCALIC++GLIAV+RC WLRR   G  +V G+Q        A+AN+GLKKK+LQSLPK  +  
Subjt:  MTRYIRALAANTSSAPPP---EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR---GGGSV-GNQ--------ASANRGLKKKILQSLPKFRYKS

Query:  TGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVE
           E +  AECAICLAEF  G+E+R LPQCGH FHV+C+DTWLGSHSSCPSCRQILVVARC KCG  P    G ++   E E E+E
Subjt:  TGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVE

AT1G76410.1 RING/U-box superfamily protein4.2e-4551.85Show/hide
Query:  MTRYIRALAANTSSAPPPEA-VALESDFVVILAALLCALICMVGLIAVARCAWLRR-GGGSVGNQ------ASANRGLKKKILQSLPKFRYKSTGGEGKI
        M R +  L    +S  P EA     SD V+ILA LLCAL C++GLIAV+RCAWLRR    +  +Q      A+AN+GLKKK+L+SLPK  Y       + 
Subjt:  MTRYIRALAANTSSAPPPEA-VALESDFVVILAALLCALICMVGLIAVARCAWLRR-GGGSVGNQ------ASANRGLKKKILQSLPKFRYKSTGGEGKI

Query:  AAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDNNRGLGFLP
          ECAICL EF  G+E+R LPQCGH FHVSC+DTWLGSHSSCPSCRQILVV RC KCG  P    G ++   E +  ++    G   LP
Subjt:  AAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDNNRGLGFLP

AT2G17450.1 RING-H2 finger A3A4.8e-4152.81Show/hide
Query:  MTRYIRALAANTSSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRY---KSTGG---EG
        MTR  R L    ++APPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR     G+  S N+GLKKK LQSLP+  +   +ST G   E 
Subjt:  MTRYIRALAANTSSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRY---KSTGG---EG

Query:  KIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEE
          + ECAICL +F +GEEIR LP CGH FHV C+D WL S SSCPSCR+IL   RC +CG          AH ++  +
Subjt:  KIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEE

AT4G35480.1 RING-H2 finger A3B2.5e-4252.84Show/hide
Query:  MTRYIRALAANTSSAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRRGGG----SVGNQASANRGLKKKILQSLPKFRYK-----------
        MTR  R L   T+S PPPE + A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR  G    +VG     N+GLKKK LQ+LPK  Y            
Subjt:  MTRYIRALAANTSSAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRRGGG----SVGNQASANRGLKKKILQSLPKFRYK-----------

Query:  ---STGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQ
           S+ G+G  + ECAIC+ EF EGEEIR LP C H FHV+C+D WL S SSCPSCR+ILV  +C +CG   +  +
Subjt:  ---STGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQ

AT5G01880.1 RING/U-box superfamily protein1.1e-2653.23Show/hide
Query:  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASA----NRGLKKKILQSLPKFRYKSTGGEGKIAA-ECAICLAEFMEGEEIRQLPQCGHC
        +++ V+ILAALLCALI  +GL ++ RCA +R G G   + A+       GLKK+ L+  P   Y S  GE KIAA ECAICL EF +GE +R LP C H 
Subjt:  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASA----NRGLKKKILQSLPKFRYKSTGGEGKIAA-ECAICLAEFMEGEEIRQLPQCGHC

Query:  FHVSCVDTWLGSHSSCPSCRQILV
        FH+SC+DTWL SHSSCP+CR  L+
Subjt:  FHVSCVDTWLGSHSSCPSCRQILV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGCTATATCAGAGCTCTCGCCGCGAATACTTCGTCGGCACCGCCGCCGGAGGCGGTGGCTTTGGAGTCGGACTTCGTGGTGATTCTGGCAGCGCTGCTGTGTGC
CCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCGTGGCTCCGCCGTGGGGGTGGAAGTGTTGGAAATCAGGCGTCGGCGAATAGAGGACTGAAGAAGAAGA
TCCTGCAGTCGCTTCCGAAATTCAGGTACAAGTCGACCGGGGGAGAGGGGAAAATTGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCATGGAGGGGGAGGAGATCCGG
CAGCTGCCACAGTGCGGACATTGCTTCCACGTCAGCTGTGTAGACACGTGGCTGGGGTCCCACTCCTCATGTCCTTCTTGCCGTCAGATTCTGGTAGTGGCGAGATGCCA
GAAGTGCGGGCAGTTTCCGGCCGTCGTGCAAGGCGGCGCTGCTCACAACAACGAAGAAGAGGAGGAAGTGGAAGATAACAACAGGGGTTTGGGATTTTTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
TTTTGTGTTACTTTTTGTATAACTAAATAACTTATAAAAATGAAATTGAATTTTAAAGTAGAGATAAGTATGAGTAACACAGAACCAAAGTATGGAGTGGCCCACCTCTC
AAGTTGTCCTCTTCTAATCTTTCCCTTCTAACAACAAAAAGTCTCAAAGATTTTCCTTTTTCCCAAACAAAGAATCACAAACCCTCAATACCAATCCCTTCTATTCGCAA
CCCTCTTTGTCATGACTCGCTATATCAGAGCTCTCGCCGCGAATACTTCGTCGGCACCGCCGCCGGAGGCGGTGGCTTTGGAGTCGGACTTCGTGGTGATTCTGGCAGCG
CTGCTGTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCGTGGCTCCGCCGTGGGGGTGGAAGTGTTGGAAATCAGGCGTCGGCGAATAGAGGACT
GAAGAAGAAGATCCTGCAGTCGCTTCCGAAATTCAGGTACAAGTCGACCGGGGGAGAGGGGAAAATTGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCATGGAGGGGG
AGGAGATCCGGCAGCTGCCACAGTGCGGACATTGCTTCCACGTCAGCTGTGTAGACACGTGGCTGGGGTCCCACTCCTCATGTCCTTCTTGCCGTCAGATTCTGGTAGTG
GCGAGATGCCAGAAGTGCGGGCAGTTTCCGGCCGTCGTGCAAGGCGGCGCTGCTCACAACAACGAAGAAGAGGAGGAAGTGGAAGATAACAACAGGGGTTTGGGATTTTT
GCCTTGACTCTCACTATCATTCAACGCCATACTCTTCAAAGTTGAAACGAAATTTAGCTTTACTTCACCCTCTAGTTTGTTTCTGTTTCATCACTCACTCACAAGATTGA
GTTTTGTGTGAATTCTTTTCTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIR
QLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDNNRGLGFLP