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Clc10G00740 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G00740
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr10:707017..715488
RNA-Seq ExpressionClc10G00740
SyntenyClc10G00740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651895.1 hypothetical protein Csa_006112 [Cucumis sativus]3.2e-1246.43Show/hide
Query:  EELDDGNILKLNLDDDEMRAEENFLVEYF-HTSNVANITMFDVVSNESFEVTMTQVT-SKRFHIQWGMDFVSKKNYMGGDGI--RWDCRKEKLCFRVLPV
        E LD    L L LD  EM  E +FL+ YF   S  A ITMFDVVS +SF+ TM + + S +F I W  DFV   NY  GD I   W+ + + LCF ++  
Subjt:  EELDDGNILKLNLDDDEMRAEENFLVEYF-HTSNVANITMFDVVSNESFEVTMTQVT-SKRFHIQWGMDFVSKKNYMGGDGI--RWDCRKEKLCFRVLPV

Query:  SARRTYPQIAHQ
        SA RTYPQ++ Q
Subjt:  SARRTYPQIAHQ

KAE8651896.1 hypothetical protein Csa_006487 [Cucumis sativus]5.5e-1245.54Show/hide
Query:  EELDDGNILKLNLDDDEMRAEENFLVEYF-HTSNVANITMFDVVSNESFEVTMTQVT-SKRFHIQWGMDFVSKKNYMGGDGI--RWDCRKEKLCFRVLPV
        E LD    L L LD  EM  E +FL+ YF   +  A ITMFDVVS +SF+ TM + + S +F I W  DFV   NY  GD I   W+ + + LCF ++  
Subjt:  EELDDGNILKLNLDDDEMRAEENFLVEYF-HTSNVANITMFDVVSNESFEVTMTQVT-SKRFHIQWGMDFVSKKNYMGGDGI--RWDCRKEKLCFRVLPV

Query:  SARRTYPQIAHQ
        SA RTYPQ++ Q
Subjt:  SARRTYPQIAHQ

KAG6575830.1 hypothetical protein SDJN03_26469, partial [Cucurbita argyrosperma subsp. sororia]1.5e-0631.31Show/hide
Query:  EMNGTLRLEEN--EMRVRMNILEYFPREEVKKAMKDAGNGIQITIFDETKNETKRTRMKRASKEEIFHIKWEIEGKEYVVGDQIAMYWDTANKRLCYQI
        +MNG L+L E+  +  +R N+  ++PR +V+   +  G+ ++I ++D   ++  +T M+       +HI+W+I+ K Y  GD + M+WD    RL Y+I
Subjt:  EMNGTLRLEEN--EMRVRMNILEYFPREEVKKAMKDAGNGIQITIFDETKNETKRTRMKRASKEEIFHIKWEIEGKEYVVGDQIAMYWDTANKRLCYQI

KAG6575832.1 hypothetical protein SDJN03_26471, partial [Cucurbita argyrosperma subsp. sororia]9.1e-0730.36Show/hide
Query:  TRTYQQITHQHYREMNGTLRLEENEM--RVRMNILEYFPREEVKKAMKDAGNGIQITIFDETKNETKRTRMKRASKEEIFHIKWEIEGKEYVVGDQIAMY
        T  +  I      +MNG L+L E+++   +  N+  ++ R +V+   K  GN  +IT+FDE  NE   T ++       +HI+W+++ K Y  G  + M 
Subjt:  TRTYQQITHQHYREMNGTLRLEENEM--RVRMNILEYFPREEVKKAMKDAGNGIQITIFDETKNETKRTRMKRASKEEIFHIKWEIEGKEYVVGDQIAMY

Query:  WDTANKRLCYQI
        WD    RL Y++
Subjt:  WDTANKRLCYQI

TrEMBL top hitse value%identityAlignment
A0A0A0LD04 Uncharacterized protein1.6e-1246.43Show/hide
Query:  EELDDGNILKLNLDDDEMRAEENFLVEYF-HTSNVANITMFDVVSNESFEVTMTQVT-SKRFHIQWGMDFVSKKNYMGGDGI--RWDCRKEKLCFRVLPV
        E LD    L L LD  EM  E +FL+ YF   S  A ITMFDVVS +SF+ TM + + S +F I W  DFV   NY  GD I   W+ + + LCF ++  
Subjt:  EELDDGNILKLNLDDDEMRAEENFLVEYF-HTSNVANITMFDVVSNESFEVTMTQVT-SKRFHIQWGMDFVSKKNYMGGDGI--RWDCRKEKLCFRVLPV

Query:  SARRTYPQIAHQ
        SA RTYPQ++ Q
Subjt:  SARRTYPQIAHQ

A0A0A0LJ50 Uncharacterized protein1.2e-1246.43Show/hide
Query:  EELDDGNILKLNLDDDEMRAEENFLVEYF-HTSNVANITMFDVVSNESFEVTMTQVT-SKRFHIQWGMDFVSKKNYMGGDGI--RWDCRKEKLCFRVLPV
        E LD    L L LD  EM  E +FL+ YF   S  A ITMFDVVS +SF+ TM + + S +F I W  DFV   NY  GD I   W+ + + LCF ++  
Subjt:  EELDDGNILKLNLDDDEMRAEENFLVEYF-HTSNVANITMFDVVSNESFEVTMTQVT-SKRFHIQWGMDFVSKKNYMGGDGI--RWDCRKEKLCFRVLPV

Query:  SARRTYPQIAHQ
        SA RTYPQ++ Q
Subjt:  SARRTYPQIAHQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAATCCTTGGACAATGACAGAGGAGCTAGATGATAGCAACACATTGAAGCTAAATTTGGATGATAATGAAATGAGAGTTGAAGAAAATTTTCTTGTTGAGTATTT
TCATACATCAAATGTAGCAAATATCACAATGTTTGATGTTGTTTCAAACGAGAGTGTTGAAGTAACCATGACACAGGTGGTCTCGAAAAAAGAGAAACTATGTAGAAAAG
AGAAACTATGTTTTAGAGTTCTTCCTGTTTCAGCTACGAGAACTTATCAACAAATTACTCATCAACATTATAGAGAGATGAATGGAACATTGAGGTTGGAAGAGAACGAA
ATGAGAGTGAGAATGAATATACTGGAATACTTCCCAAGAGAAGAAGTGAAGAAGGCGATGAAAGATGCTGGAAATGGAATTCAAATCACTATTTTTGATGAGACAAAAAA
TGAAACAAAGAGAACGAGAATGAAGAGAGCTTCAAAGGAAGAAATATTTCATATAAAATGGGAAATTGAAGGAAAAGAGTACGTGGTTGGAGACCAAATTGCAATGTATT
GGGACACAGCTAACAAGAGATTGTGTTACCAAATCTTTCCGAATTCACCTCTTAGAAATGATCTTGTCAAAAGTTTAGAAGATAATTTGGAAGGGAACGAATTGGGAATG
AGAATGAATATACTGAAATACTTCCCAAGAGAAGAAGTGAAGAAGGCGATGAAAGATGCTGGAAATGGAATTCAAATCACTATTTTTGATCAGACAAGAAATGAAACAAA
GAGAACAATAATGAAGAGAGCTTCAAATGAGAAATATTTCATATGGAATGGGAAATTGAAGGAAAAGGAAGAGCTAGATGATGGCAACATATTGAAGCTAAATTTGGATG
ATGATGAAATGAGAGCTGAAGAAAATTTTCTTGTCGAGTACTTTCATACGTCAAATGTAGCAAATATCACCATGTTTGATGTTGTTTCAAACGAGAGTTTTGAAGTAACC
ATGACACAGGTGACCTCTAAGCGATTTCATATCCAATGGGGTATGGACTTCGTAAGCAAAAAAAACTATATGGGGGGAGATGGAATACGTTGGGATTGTAGGAAAGAGAA
ATTATGTTTTAGGGTTCTTCCTGTTTCAGCTAGGCGAACTTATCCACAAATTGCTCATCAACGTTACATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAATCCTTGGACAATGACAGAGGAGCTAGATGATAGCAACACATTGAAGCTAAATTTGGATGATAATGAAATGAGAGTTGAAGAAAATTTTCTTGTTGAGTATTT
TCATACATCAAATGTAGCAAATATCACAATGTTTGATGTTGTTTCAAACGAGAGTGTTGAAGTAACCATGACACAGGTGGTCTCGAAAAAAGAGAAACTATGTAGAAAAG
AGAAACTATGTTTTAGAGTTCTTCCTGTTTCAGCTACGAGAACTTATCAACAAATTACTCATCAACATTATAGAGAGATGAATGGAACATTGAGGTTGGAAGAGAACGAA
ATGAGAGTGAGAATGAATATACTGGAATACTTCCCAAGAGAAGAAGTGAAGAAGGCGATGAAAGATGCTGGAAATGGAATTCAAATCACTATTTTTGATGAGACAAAAAA
TGAAACAAAGAGAACGAGAATGAAGAGAGCTTCAAAGGAAGAAATATTTCATATAAAATGGGAAATTGAAGGAAAAGAGTACGTGGTTGGAGACCAAATTGCAATGTATT
GGGACACAGCTAACAAGAGATTGTGTTACCAAATCTTTCCGAATTCACCTCTTAGAAATGATCTTGTCAAAAGTTTAGAAGATAATTTGGAAGGGAACGAATTGGGAATG
AGAATGAATATACTGAAATACTTCCCAAGAGAAGAAGTGAAGAAGGCGATGAAAGATGCTGGAAATGGAATTCAAATCACTATTTTTGATCAGACAAGAAATGAAACAAA
GAGAACAATAATGAAGAGAGCTTCAAATGAGAAATATTTCATATGGAATGGGAAATTGAAGGAAAAGGAAGAGCTAGATGATGGCAACATATTGAAGCTAAATTTGGATG
ATGATGAAATGAGAGCTGAAGAAAATTTTCTTGTCGAGTACTTTCATACGTCAAATGTAGCAAATATCACCATGTTTGATGTTGTTTCAAACGAGAGTTTTGAAGTAACC
ATGACACAGGTGACCTCTAAGCGATTTCATATCCAATGGGGTATGGACTTCGTAAGCAAAAAAAACTATATGGGGGGAGATGGAATACGTTGGGATTGTAGGAAAGAGAA
ATTATGTTTTAGGGTTCTTCCTGTTTCAGCTAGGCGAACTTATCCACAAATTGCTCATCAACGTTACATGTAG
Protein sequenceShow/hide protein sequence
MVNPWTMTEELDDSNTLKLNLDDNEMRVEENFLVEYFHTSNVANITMFDVVSNESVEVTMTQVVSKKEKLCRKEKLCFRVLPVSATRTYQQITHQHYREMNGTLRLEENE
MRVRMNILEYFPREEVKKAMKDAGNGIQITIFDETKNETKRTRMKRASKEEIFHIKWEIEGKEYVVGDQIAMYWDTANKRLCYQIFPNSPLRNDLVKSLEDNLEGNELGM
RMNILKYFPREEVKKAMKDAGNGIQITIFDQTRNETKRTIMKRASNEKYFIWNGKLKEKEELDDGNILKLNLDDDEMRAEENFLVEYFHTSNVANITMFDVVSNESFEVT
MTQVTSKRFHIQWGMDFVSKKNYMGGDGIRWDCRKEKLCFRVLPVSARRTYPQIAHQRYM