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Clc10G00760 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G00760
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr10:717005..717424
RNA-Seq ExpressionClc10G00760
SyntenyClc10G00760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575830.1 hypothetical protein SDJN03_26469, partial [Cucurbita argyrosperma subsp. sororia]8.2e-1133.64Show/hide
Query:  DYTMSKRLGSREMNGTLRLEEN--ELGVRMNILEYFPREEVKKVMKDAGNGIQITIFDETRNETKRTRMKRASKEEIFHIEWEIEGKGYVVGDQIAMYWD
        D+TM K+L   +MNG L+L E+  +  +R N+  ++PR +V+ + +  G+ ++I ++D   ++  +T M+       +HIEW+I+ K Y  GD + M+WD
Subjt:  DYTMSKRLGSREMNGTLRLEEN--ELGVRMNILEYFPREEVKKVMKDAGNGIQITIFDETRNETKRTRMKRASKEEIFHIEWEIEGKGYVVGDQIAMYWD

Query:  TTNKRLCYQI
            RL Y+I
Subjt:  TTNKRLCYQI

KAG6575832.1 hypothetical protein SDJN03_26471, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1034.48Show/hide
Query:  MTSRSRDYTMSKRLGSREMNGTLRLEENEL--GVRMNILEYFPREEVKKVMKDAGNGIQITIFDETRNETKRTRMKRASKEEIFHIEWEIEGKGYVVGDQ
        MT R   +TM K+L   +MNG L+L E+++   +  N+  ++ R +V+ + K  GN  +IT+FDE  NE   T ++       +HIEW+++ K Y  G  
Subjt:  MTSRSRDYTMSKRLGSREMNGTLRLEENEL--GVRMNILEYFPREEVKKVMKDAGNGIQITIFDETRNETKRTRMKRASKEEIFHIEWEIEGKGYVVGDQ

Query:  IAMYWDTTNKRLCYQI
        + M WD    RL Y++
Subjt:  IAMYWDTTNKRLCYQI

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGTAGAAGTCGCGATTACACAATGAGTAAGAGGTTGGGATCAAGAGAGATGAATGGAACATTGAGGTTGGAAGAAAACGAATTGGGAGTGAGAATGAATATATT
GGAATACTTCCCGAGAGAAGAAGTGAAGAAGGTGATGAAAGATGCTGGAAATGGAATTCAAATCACTATTTTTGATGAGACAAGAAATGAAACAAAGAGAACAAGAATGA
AGAGAGCTTCAAAGGAAGAAATATTTCATATAGAATGGGAAATTGAAGGAAAAGGGTACGTGGTTGGAGACCAAATTGCAATGTATTGGGACACAACTAACAAGAGATTG
TGTTACCAAATCTTTCCAAATTCACCTCTTAGAAATGATCTTGCCAAAAGTTTGGCAACATCCTCTTCTTCCTCCTCTTTTAGAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAGTAGAAGTCGCGATTACACAATGAGTAAGAGGTTGGGATCAAGAGAGATGAATGGAACATTGAGGTTGGAAGAAAACGAATTGGGAGTGAGAATGAATATATT
GGAATACTTCCCGAGAGAAGAAGTGAAGAAGGTGATGAAAGATGCTGGAAATGGAATTCAAATCACTATTTTTGATGAGACAAGAAATGAAACAAAGAGAACAAGAATGA
AGAGAGCTTCAAAGGAAGAAATATTTCATATAGAATGGGAAATTGAAGGAAAAGGGTACGTGGTTGGAGACCAAATTGCAATGTATTGGGACACAACTAACAAGAGATTG
TGTTACCAAATCTTTCCAAATTCACCTCTTAGAAATGATCTTGCCAAAAGTTTGGCAACATCCTCTTCTTCCTCCTCTTTTAGAAGATAA
Protein sequenceShow/hide protein sequence
MTSRSRDYTMSKRLGSREMNGTLRLEENELGVRMNILEYFPREEVKKVMKDAGNGIQITIFDETRNETKRTRMKRASKEEIFHIEWEIEGKGYVVGDQIAMYWDTTNKRL
CYQIFPNSPLRNDLAKSLATSSSSSSFRR