; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G01050 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G01050
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionacyl-CoA-binding protein
Genome locationClcChr10:964253..967488
RNA-Seq ExpressionClc10G01050
SyntenyClc10G01050
Gene Ontology termsGO:0000062 - fatty-acyl-CoA binding (molecular function)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR000582 - Acyl-CoA-binding protein, ACBP
IPR014352 - FERM/acyl-CoA-binding protein superfamily
IPR022408 - Acyl-CoA-binding protein, ACBP, conserved site
IPR035984 - Acyl-CoA binding protein superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028224.1 hypothetical protein SDJN02_09404, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-3693.02Show/hide
Query:  LEEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS
        +EEFEEYAEKAKTLPENTSNE+KLILYGLYKQATVG VNTSRPGVF QRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQE+AAA+
Subjt:  LEEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS

XP_022145449.1 acyl-CoA-binding protein [Momordica charantia]1.0e-3694.12Show/hide
Query:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS
        E+FEEYAEKAKTLPENTSNE+KLILYGLYKQATVGPVNTSRPG+FNQRDRAKWDAWKAVEAKSKDDAM+DYITKVKQLQEAAA+S
Subjt:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS

XP_022923252.1 acyl-CoA-binding protein [Cucurbita moschata]9.1e-3897.65Show/hide
Query:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS
        EEFEEYAEKAKTLPENTSNE+KLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAA+
Subjt:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS

XP_023005811.1 acyl-CoA-binding domain-containing protein 1-like [Cucurbita maxima]1.4e-3594.12Show/hide
Query:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS
        EEFEEYAEKAKTL ENTSNE+KLILYGLYKQATVG VNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQE+AAA+
Subjt:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS

XP_038876585.1 acyl-CoA-binding protein [Benincasa hispida]9.1e-3897.65Show/hide
Query:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS
        EEFEEYAEKAKTLPENTSNE+KLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAA+S
Subjt:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS

TrEMBL top hitse value%identityAlignment
A0A6J1CVA5 acyl-CoA-binding protein4.8e-3794.12Show/hide
Query:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS
        E+FEEYAEKAKTLPENTSNE+KLILYGLYKQATVGPVNTSRPG+FNQRDRAKWDAWKAVEAKSKDDAM+DYITKVKQLQEAAA+S
Subjt:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS

A0A6J1E5N1 acyl-CoA-binding protein4.4e-3897.65Show/hide
Query:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS
        EEFEEYAEKAKTLPENTSNE+KLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAA+
Subjt:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS

A0A6J1F9P6 acyl-CoA-binding domain-containing protein 17.0e-3694.12Show/hide
Query:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS
        EEFEEYAEKAKTLPENTSNE+KLILYGLYKQATVG VNTSRPGVF QRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQE+AAA+
Subjt:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS

A0A6J1HK57 acyl-CoA-binding protein4.4e-3897.65Show/hide
Query:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS
        EEFEEYAEKAKTLPENTSNE+KLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAA+
Subjt:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS

A0A6J1KW16 acyl-CoA-binding domain-containing protein 1-like7.0e-3694.12Show/hide
Query:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS
        EEFEEYAEKAKTL ENTSNE+KLILYGLYKQATVG VNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQE+AAA+
Subjt:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS

SwissProt top hitse value%identityAlignment
O04066 Acyl-CoA-binding protein1.7e-3484.71Show/hide
Query:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS
        E+FEE+AEKAKTLPENT+NE+KLILYGLYKQATVGPVNTSRPG+FN RDRAKWDAWKAVE KS ++AMSDYITKVKQL   AAAS
Subjt:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS

Q39779 Acyl-CoA-binding protein3.8e-3177.65Show/hide
Query:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS
        EEFEE+AEK KTLP   SN+D LILYGLYKQATVGPVNTSRPG+FN R++ KWDAWKAVE KSK++AM DYITKVKQL EAA +S
Subjt:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS

Q5VRM0 Acyl-CoA-binding domain-containing protein 21.6e-3278.82Show/hide
Query:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS
        EEFEE+AEKAKTLP+  SNEDKL+LYGLYKQATVGPV T RPG+FN +DR KWDAWKAVE KSK++AM+DYITKVKQL E A+AS
Subjt:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS

Q75G87 Acyl-CoA-binding domain-containing protein 38.8e-3688.1Show/hide
Query:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAA
        E+FEEYAEK KTLPE+TSNEDKLILYGLYKQATVG VNTSRPG+F QRDRAKWDAWKAVE KSK++AMSDYITKVKQLQE AAA
Subjt:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAA

Q84SC3 Acyl-CoA-binding domain-containing protein 12.8e-3483.53Show/hide
Query:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS
        E+FE+YAEKAKTLPE+TSNE+KLILYGLYKQATVG VNT+RPG+F QRDRAKWDAWKAVE KSK++AMSDYITKVKQL E AAA+
Subjt:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAS

Arabidopsis top hitse value%identityAlignment
AT1G31812.1 acyl-CoA-binding protein 64.8e-2972.62Show/hide
Query:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAA
        EEFEE+AEK  TL E  SNED LILYGLYKQA  GPV+TSRPG+F+ ++RAKWDAWKAVE KS ++AM+DYITKVKQL E AA+
Subjt:  EEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAA

AT3G05420.1 acyl-CoA binding protein 41.5e-0633.33Show/hide
Query:  AKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYI
        AK +     ++  L+LY LY+QATVGP NT +P  +   +++KW +W+ +      +AM  ++
Subjt:  AKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYI

AT3G05420.2 acyl-CoA binding protein 41.5e-0633.33Show/hide
Query:  AKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYI
        AK +     ++  L+LY LY+QATVGP NT +P  +   +++KW +W+ +      +AM  ++
Subjt:  AKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYI

AT4G27780.1 acyl-CoA binding protein 25.2e-0734.44Show/hide
Query:  VESARLKKKVCLEEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQL
        VES  L +             A  L +   ++ +  LYGLYK AT GP    +P       RAKW AW+ + A   ++AM  YI  V QL
Subjt:  VESARLKKKVCLEEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQL

AT5G53470.1 acyl-CoA binding protein 14.2e-0938.71Show/hide
Query:  VESARLKKKVCLEEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEA
        VES  L +          A  +  L +  SNE +L LYGLYK AT GP    +P       RAKW AW+ + A   ++AM  YI  V QL  A
Subjt:  VESARLKKKVCLEEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAATATTCTAACACTCTTCATCCTGGAACTAAGTTTCCTCAAACTGAAAAGATTTAGTACGATCACATTGGTGGAGTCTGCTAGGCTCAAGAAGAAAGTT
TGTTTGGAGGAGTTTGAGGAGTATGCTGAGAAAGCAAAGACCTTGCCGGAGAACACAAGCAATGAAGACAAACTCATTCTCTATGGACTATACAAGCAGGCCACT
GTTGGACCCGTGAACACTAGCCGACCTGGAGTGTTCAACCAGAGGGACAGAGCCAAATGGGATGCCTGGAAGGCTGTTGAAGCTAAATCCAAGGACGATGCAATG
AGCGACTACATCACCAAGGTGAAACAGTTGCAAGAGGCAGCTGCTGCTAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAATATTCTAACACTCTTCATCCTGGAACTAAGTTTCCTCAAACTGAAAAGATTTAGTACGATCACATTGGTGGAGTCTGCTAGGCTCAAGAAGAAAGTT
TGTTTGGAGGAGTTTGAGGAGTATGCTGAGAAAGCAAAGACCTTGCCGGAGAACACAAGCAATGAAGACAAACTCATTCTCTATGGACTATACAAGCAGGCCACT
GTTGGACCCGTGAACACTAGCCGACCTGGAGTGTTCAACCAGAGGGACAGAGCCAAATGGGATGCCTGGAAGGCTGTTGAAGCTAAATCCAAGGACGATGCAATG
AGCGACTACATCACCAAGGTGAAACAGTTGCAAGAGGCAGCTGCTGCTAGCTGA
Protein sequenceShow/hide protein sequence
MNNILTLFILELSFLKLKRFSTITLVESARLKKKVCLEEFEEYAEKAKTLPENTSNEDKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAM
SDYITKVKQLQEAAAAS