; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G01080 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G01080
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionELL-associated factor 1-like
Genome locationClcChr10:988571..996057
RNA-Seq ExpressionClc10G01080
SyntenyClc10G01080
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052985.1 hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa]3.8e-4383.2Show/hide
Query:  MAEKRSPMAFRLKKAFTKLTAFVRLCLVRRQRSQRLRSFVSDDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQLRLE
        MAEK+SPMA RLKKA  KLTA VRLCLV R+RSQRL SF SDDR VGIRIVLEDQ RIAENS ARKLERASSSRYG  E+DVDQRAE+FI+NFRRQLRLE
Subjt:  MAEKRSPMAFRLKKAFTKLTAFVRLCLVRRQRSQRLRSFVSDDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQLRLE

Query:  RQISLQLRYYRVNSYETEHEERSSP
        RQISLQLRYYRVNSYETE+E+ S P
Subjt:  RQISLQLRYYRVNSYETEHEERSSP

KAE8650012.1 hypothetical protein Csa_009473 [Cucumis sativus]1.6e-3344.69Show/hide
Query:  MAEKRSPMAFRLKKAFTKLTAFVRLCLVRRQRSQRLRSFVS-DDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQLRL
        MAEK+SPMA RL+KA  KL A +RLCL+ RQRS+RL SF S DD+ VGIRIVLEDQ RIAE+S  RKLERASSSRYG  E+DVDQRAE+FI+NFRRQLRL
Subjt:  MAEKRSPMAFRLKKAFTKLTAFVRLCLVRRQRSQRLRSFVS-DDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQLRL

Query:  ERQISLQLRYYRVN---SYETEHEERSSPDAADDVDQRAEIFIRQLRLERQISMQLRYYRVNSYEIEHRDRRRTQRKLTPFPSLRLCLVRPRRSRPRSLR
        ERQISLQL     +   S   E +E  SP A              LRLE                        T  KL  F  LRLCL+           
Subjt:  ERQISLQLRYYRVN---SYETEHEERSSPDAADDVDQRAEIFIRQLRLERQISMQLRYYRVNSYEIEHRDRRRTQRKLTPFPSLRLCLVRPRRSRPRSLR

Query:  RSDDRKVRTRSFFEAQRRIAQNPSVTQLQPPAST--STYGNREDDVDQRAQIYIHKVRNQLRTRSFFEAQRRI
              +R RS +  +  +  + +   L+  +S+   +    EDDVD RA+I+I   R QLR       Q R+
Subjt:  RSDDRKVRTRSFFEAQRRIAQNPSVTQLQPPAST--STYGNREDDVDQRAQIYIHKVRNQLRTRSFFEAQRRI

KAG6596691.1 hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sororia]4.2e-3469.6Show/hide
Query:  MAEKRSPMAFRLKKAFTKLTAFVRLCLVRRQRSQRLRSFVSDDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQLRLE
        MA+K+SP+ FRLKK+  KLTAF+RLC+ RRQ S+RLRSF SDDRT G+R  LED+ RI EN S RKLERASS+ Y + EDDVD+R+++FID F RQLRLE
Subjt:  MAEKRSPMAFRLKKAFTKLTAFVRLCLVRRQRSQRLRSFVSDDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQLRLE

Query:  RQISLQLRYYRVNSYETEHEERSSP
        RQISLQLRY RVNS ETE EE+S P
Subjt:  RQISLQLRYYRVNSYETEHEERSSP

XP_011652707.1 uncharacterized protein LOC105435054 [Cucumis sativus]6.5e-3577.78Show/hide
Query:  MAFRLKKAFTKLTAFVRLCLVRRQRSQRLRSFVS-DDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQLRLERQISLQ
        MA RL+KA  KL A +RLCL+ RQRS+RL SF S DD+ VGIRIVLEDQ RIAE+S  RKLERASSSRYG  E+DVDQRAE+FI+NFRRQLRLERQISLQ
Subjt:  MAFRLKKAFTKLTAFVRLCLVRRQRSQRLRSFVS-DDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQLRLERQISLQ

Query:  LRYYRVNSYETEHEERS
        LRYYRVNSYETE+E+RS
Subjt:  LRYYRVNSYETEHEERS

XP_022145292.1 uncharacterized protein LOC111014780 [Momordica charantia]9.8e-3165.89Show/hide
Query:  MAEKRSPMAFRLKKAFTKLTAFVR----LCLVRRQRSQRLRSFVSDDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQ
        MAEK+SP+  RLKKA  K+TA +R    LCL RR+ S RLRSF   DRTVG+R  LED+  I EN S R+LERASS RYG+ EDDVD+R+++FIDNF R+
Subjt:  MAEKRSPMAFRLKKAFTKLTAFVR----LCLVRRQRSQRLRSFVSDDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQ

Query:  LRLERQISLQLRYYRVNSYETEHEERSSP
        LRLERQISLQLRYYR+NS  TE EERS P
Subjt:  LRLERQISLQLRYYRVNSYETEHEERSSP

TrEMBL top hitse value%identityAlignment
A0A0A0L4Z8 Uncharacterized protein6.2e-3978.23Show/hide
Query:  MAEKRSPMAFRLKKAFTKLTAFVRLCLVRRQRSQRLRSFVS-DDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQLRL
        MAEK+SPMA RL+KA  KL A +RLCL+ RQRS+RL SF S DD+ VGIRIVLEDQ RIAE+S  RKLERASSSRYG  E+DVDQRAE+FI+NFRRQLRL
Subjt:  MAEKRSPMAFRLKKAFTKLTAFVRLCLVRRQRSQRLRSFVS-DDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQLRL

Query:  ERQISLQLRYYRVNSYETEHEERS
        ERQISLQLRYYRVNSYETE+E+RS
Subjt:  ERQISLQLRYYRVNSYETEHEERS

A0A0A0L6A3 Uncharacterized protein4.3e-1654.03Show/hide
Query:  MAFRLKKAFTKLTAFVRLCLVRRQRS-QRLRSFVSDDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGS---DEDDVDQRAEMFIDNFRRQLRLERQI
        MA RL++   KL AF+RLCL+ R+RS  R R+ + DD+T                  AR LER SSSRY S    EDDVD RAE+FI+NFRRQLRLERQI
Subjt:  MAFRLKKAFTKLTAFVRLCLVRRQRS-QRLRSFVSDDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGS---DEDDVDQRAEMFIDNFRRQLRLERQI

Query:  SLQLRYYRV--NSYETEHEERSSP
        SLQLR Y V  NS+ET++EE   P
Subjt:  SLQLRYYRV--NSYETEHEERSSP

A0A1R3J730 Uncharacterized protein3.5e-1042.4Show/hide
Query:  MAEKRSPMAFRLKKAFTKLTAFVRLCLVR-------RQRSQRLRSFVSDDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNF
        M  +   +  R KKA  KL + + L L +       R+ S R R  +S +  +G+   LED+      SS R L+R  S  YG+ +DDVD+RAE+FI NF
Subjt:  MAEKRSPMAFRLKKAFTKLTAFVRLCLVR-------RQRSQRLRSFVSDDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNF

Query:  RRQLRLERQISLQLRYYRVNSYETE
        RRQL LERQ+SL+LRY R  S++T+
Subjt:  RRQLRLERQISLQLRYYRVNSYETE

A0A5D3CHZ5 Uncharacterized protein1.8e-4383.2Show/hide
Query:  MAEKRSPMAFRLKKAFTKLTAFVRLCLVRRQRSQRLRSFVSDDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQLRLE
        MAEK+SPMA RLKKA  KLTA VRLCLV R+RSQRL SF SDDR VGIRIVLEDQ RIAENS ARKLERASSSRYG  E+DVDQRAE+FI+NFRRQLRLE
Subjt:  MAEKRSPMAFRLKKAFTKLTAFVRLCLVRRQRSQRLRSFVSDDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQLRLE

Query:  RQISLQLRYYRVNSYETEHEERSSP
        RQISLQLRYYRVNSYETE+E+ S P
Subjt:  RQISLQLRYYRVNSYETEHEERSSP

A0A6J1CW64 uncharacterized protein LOC1110147804.7e-3165.89Show/hide
Query:  MAEKRSPMAFRLKKAFTKLTAFVR----LCLVRRQRSQRLRSFVSDDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQ
        MAEK+SP+  RLKKA  K+TA +R    LCL RR+ S RLRSF   DRTVG+R  LED+  I EN S R+LERASS RYG+ EDDVD+R+++FIDNF R+
Subjt:  MAEKRSPMAFRLKKAFTKLTAFVR----LCLVRRQRSQRLRSFVSDDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQ

Query:  LRLERQISLQLRYYRVNSYETEHEERSSP
        LRLERQISLQLRYYR+NS  TE EERS P
Subjt:  LRLERQISLQLRYYRVNSYETEHEERSSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G57510.1 unknown protein2.6e-0544.12Show/hide
Query:  GIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQLRLERQISLQLRYYRVNS
        G+     +    +  SS   L R  S    SDE D+D +AEMFI NF RQL++ERQISL+L+Y + N+
Subjt:  GIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQLRLERQISLQLRYYRVNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGAAGAGATCACCAATGGCGTTCCGCCTGAAGAAGGCATTCACGAAACTCACTGCATTTGTCCGCCTCTGCCTCGTTCGTCGGCAACGTTCCCAACGGCTGAG
ATCATTCGTTTCCGACGATCGGACGGTAGGCATACGGATTGTCTTGGAAGATCAGAGGAGAATCGCTGAGAATTCTTCTGCGAGAAAGCTTGAACGTGCTTCGAGTTCAA
GATACGGAAGCGATGAAGACGATGTCGATCAACGAGCGGAGATGTTCATTGATAATTTCCGCCGTCAATTGAGGTTAGAAAGACAAATTTCTTTGCAATTAAGGTATTAT
AGAGTTAATAGCTACGAAACAGAGCACGAAGAGAGATCGTCGCCGGACGCAGCCGACGATGTCGATCAGCGAGCGGAGATTTTCATCCGTCAATTGAGGTTAGAAAGACA
AATTTCTATGCAATTAAGGTATTATAGAGTTAATAGCTATGAAATAGAGCATAGAGATCGCCGCCGGACGCAGCGGAAACTCACGCCATTTCCCTCTCTCCGCCTCTGCC
TTGTCCGTCCCCGACGTTCCCGCCCACGCTCCCTCCGACGTTCCGACGACCGGAAGGTCAGGACACGGAGTTTCTTCGAGGCTCAGAGGAGAATCGCTCAAAATCCTTCT
GTCACACAGCTTCAACCACCTGCTTCCACTTCAACCTATGGAAACCGTGAAGACGATGTCGATCAGCGAGCTCAGATTTACATCCATAAAGTTCGCAATCAATTGAGGAC
ACGGAGTTTCTTCGAGGCTCAGAGGAGAATCGCTCAAAATCCTTCTGTCACACAGCTTCAACCTGCTGCTTCCACTTCAAGCTATGGAAGCCGAGAAGACGATGTCGATC
AGCGAGCTCAGATTTACATCCATAAAGTTCGCAGTCAATTGAGGTTACAACCACAAATTTCTAAGCAATCGAGCTACCGCGACGGAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAGAAGAGATCACCAATGGCGTTCCGCCTGAAGAAGGCATTCACGAAACTCACTGCATTTGTCCGCCTCTGCCTCGTTCGTCGGCAACGTTCCCAACGGCTGAG
ATCATTCGTTTCCGACGATCGGACGGTAGGCATACGGATTGTCTTGGAAGATCAGAGGAGAATCGCTGAGAATTCTTCTGCGAGAAAGCTTGAACGTGCTTCGAGTTCAA
GATACGGAAGCGATGAAGACGATGTCGATCAACGAGCGGAGATGTTCATTGATAATTTCCGCCGTCAATTGAGGTTAGAAAGACAAATTTCTTTGCAATTAAGGTATTAT
AGAGTTAATAGCTACGAAACAGAGCACGAAGAGAGATCGTCGCCGGACGCAGCCGACGATGTCGATCAGCGAGCGGAGATTTTCATCCGTCAATTGAGGTTAGAAAGACA
AATTTCTATGCAATTAAGGTATTATAGAGTTAATAGCTATGAAATAGAGCATAGAGATCGCCGCCGGACGCAGCGGAAACTCACGCCATTTCCCTCTCTCCGCCTCTGCC
TTGTCCGTCCCCGACGTTCCCGCCCACGCTCCCTCCGACGTTCCGACGACCGGAAGGTCAGGACACGGAGTTTCTTCGAGGCTCAGAGGAGAATCGCTCAAAATCCTTCT
GTCACACAGCTTCAACCACCTGCTTCCACTTCAACCTATGGAAACCGTGAAGACGATGTCGATCAGCGAGCTCAGATTTACATCCATAAAGTTCGCAATCAATTGAGGAC
ACGGAGTTTCTTCGAGGCTCAGAGGAGAATCGCTCAAAATCCTTCTGTCACACAGCTTCAACCTGCTGCTTCCACTTCAAGCTATGGAAGCCGAGAAGACGATGTCGATC
AGCGAGCTCAGATTTACATCCATAAAGTTCGCAGTCAATTGAGGTTACAACCACAAATTTCTAAGCAATCGAGCTACCGCGACGGAGAATGA
Protein sequenceShow/hide protein sequence
MAEKRSPMAFRLKKAFTKLTAFVRLCLVRRQRSQRLRSFVSDDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQLRLERQISLQLRYY
RVNSYETEHEERSSPDAADDVDQRAEIFIRQLRLERQISMQLRYYRVNSYEIEHRDRRRTQRKLTPFPSLRLCLVRPRRSRPRSLRRSDDRKVRTRSFFEAQRRIAQNPS
VTQLQPPASTSTYGNREDDVDQRAQIYIHKVRNQLRTRSFFEAQRRIAQNPSVTQLQPAASTSSYGSREDDVDQRAQIYIHKVRSQLRLQPQISKQSSYRDGE