; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G01130 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G01130
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationClcChr10:1007326..1011328
RNA-Seq ExpressionClc10G01130
SyntenyClc10G01130
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015794.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]3.6e-13893.95Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD
        MELLSRCSTLIP ASSLGL NSHGKPSNF+PKLKS+LSF SASSVLKTTA KPSRTLAP CSV MTGPQTPDAA+RGAETDAMGLL RERIVFLGNSIDD
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPE
        QAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD IIPL+PVPERVKASLNY EISKDP+
Subjt:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPE

XP_008448589.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis melo]2.3e-14095.71Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD
        MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSF SASSVLKTTALKPSRTL PPCSV MT PQTPDA+RRGAETDAMGLL RERIVFLGNSIDD
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDP
        QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID+D IIPL+PVPERVKA+LNYEE+SKDP
Subjt:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDP

XP_022145352.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica charantia]1.0e-13793.93Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD
        MELLSRCSTLIP ASSL LPNSH KPSNF+PKLKS+LSF SA SVLK TALKPSRTLA PCSVLMT PQTPD ARRGAETDAMGLL RERIVFLGNSIDD
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINS GGSLSATMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDP
        QAREIMHNKNNVTRIISEFTGHPF+KVQKDIDRDRYMSPIEAVEYGLIDGVIDKD IIPLMPVPERVKASLNYEEISKDP
Subjt:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDP

XP_023553095.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita pepo subsp. pepo]2.3e-13793.59Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD
        MELLSRCSTLIP ASSLGL NSHGKPSNF PKLKS++SF SASSVLKTTA KPSRTLAP CSV MTGPQTPDAA+RGAETDAMGLL RERIVFLGNSIDD
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPE
        QAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD IIPL+PVPERVKASLNY EISKDP+
Subjt:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPE

XP_038876611.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Benincasa hispida]1.3e-14095.71Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD
        MELLSRCSTL+P ASS+GLP SHGKPSNF PKLKSTLSF SASSVLKTTA KPSRT APPCSVLMT PQTPDAARRGAETDAMGLL RERIVFLGNSIDD
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDP
        QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD IIPLMPVPERVKASLNYEEISKDP
Subjt:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDP

TrEMBL top hitse value%identityAlignment
A0A0A0L3S1 ATP-dependent Clp protease proteolytic subunit6.4e-13390.71Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD
        MELLSRCSTL P ASSLGLPNSHGKPSNFFPKLKSTLSF SASSVLKTTALKPSRTL PPCSV MT PQTPDAARRGAETDAMGLL RERIVFLGNSIDD
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDA+DSTKDIRLFINSAGGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG A+DVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDP
        QAREIM NK+NV RIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG IDGVID+D IIPLMPVP++VK   NY E+ KDP
Subjt:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDP

A0A1S3BJF4 ATP-dependent Clp protease proteolytic subunit1.1e-14095.71Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD
        MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSF SASSVLKTTALKPSRTL PPCSV MT PQTPDA+RRGAETDAMGLL RERIVFLGNSIDD
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDP
        QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID+D IIPL+PVPERVKA+LNYEE+SKDP
Subjt:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDP

A0A6J1CWB9 ATP-dependent Clp protease proteolytic subunit5.1e-13893.93Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD
        MELLSRCSTLIP ASSL LPNSH KPSNF+PKLKS+LSF SA SVLK TALKPSRTLA PCSVLMT PQTPD ARRGAETDAMGLL RERIVFLGNSIDD
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINS GGSLSATMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDP
        QAREIMHNKNNVTRIISEFTGHPF+KVQKDIDRDRYMSPIEAVEYGLIDGVIDKD IIPLMPVPERVKASLNYEEISKDP
Subjt:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDP

A0A6J1EC18 ATP-dependent Clp protease proteolytic subunit1.5e-13793.59Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD
        MELLSRCSTLIP ASSLGL NSHGKPSNF+PKLKS+LSF SASSVLKTTA KPSRTLA  CSV MTGPQTPDAA+RGAETDAMGLL RERIVFLGNSIDD
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPE
        QAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD IIPL+PVPERVKASLNY EISKDP+
Subjt:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPE

A0A6J1HNH6 ATP-dependent Clp protease proteolytic subunit6.2e-13692.88Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD
        MELLSRCSTLIP ASSLGL NSHGKPSNF+PKLKS LSF SASSVLKTTA KPSRTLA   SV MTGPQTPDAA+RGAETDAMGLL RERIVFLGNSIDD
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINS+GGSLSATMAIYDV+QLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPE
        QAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD IIPL+PVPERVKASLNY EISKDP+
Subjt:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPE

SwissProt top hitse value%identityAlignment
Q3ANI8 ATP-dependent Clp protease proteolytic subunit 13.4e-5454.74Show/hide
Query:  PQTPDAARRGAET-DAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL
        P   + + RG    D    L RERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++INS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L
Subjt:  PQTPDAARRGAET-DAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL

Query:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDG
         GGTKGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI++ K  +  +++E TG P +K+ +D DRD ++SP EAVEYGLID V+D  G
Subjt:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDG

Q3B0U1 ATP-dependent Clp protease proteolytic subunit 27.5e-5454.21Show/hide
Query:  PQTPDAARRGAET-DAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL
        P   + + RG    D    L RERI+FLG  +DD VADA+++Q+L L+A+D  KDI++++NS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L
Subjt:  PQTPDAARRGAET-DAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL

Query:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDG
         GGTKGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI+  K  +  +++E TG P +K+ +D DRD ++SP EAVEYGLID V+D  G
Subjt:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDG

Q7UA36 ATP-dependent Clp protease proteolytic subunit 12.4e-5253.16Show/hide
Query:  PQTPDAARRGAET-DAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL
        P   + + RG    D    L RERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++INS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L
Subjt:  PQTPDAARRGAET-DAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL

Query:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDG
         GG KGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI+  K  +  ++++ TG P +K+ +D DRD ++SP EAV+YGLID V+D  G
Subjt:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDG

Q7V992 ATP-dependent Clp protease proteolytic subunit 13.1e-5254.55Show/hide
Query:  PQTPDAARRGAET-DAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL
        P   + + RG    D    L RERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++INS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L
Subjt:  PQTPDAARRGAET-DAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL

Query:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID
         GGTKGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI+  K  +  +++E TG P  K+ +D DRD ++SP +AVEYGLID V+D
Subjt:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID

Q94B60 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic2.5e-9467.35Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGP-----------QTPDAARRGAETDAMGLLFRE
        M  LS  S+L P   S  L +S    S+ FPK  +               LKP++ ++PP       P           QT ++A RGAE+D MGLL RE
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGP-----------QTPDAARRGAETDAMGLLFRE

Query:  RIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLG
        RIVFLG+SIDDFVADAIMSQLLLLDA+D  KDI+LFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN RIM+HQPLG
Subjt:  RIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLG

Query:  GASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDP
        GASGQAIDVEIQA+E+MHNKNNVT II+  T   FE+V KDIDRDRYMSPIEAVEYGLIDGVID D IIPL PVP+RVK  +NYEEISKDP
Subjt:  GASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDP

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 51.3e-4552.69Show/hide
Query:  LFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVH
        LF+ RI+  G ++DD +A+ I++QLL LDA D TKDI +++NS GGS++A MAI+D ++ +R DVST+ +G+AAS  + +L  GTKGKR ++PN+RIM+H
Subjt:  LFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVH

Query:  QPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVI
        QPLGGA G   D++IQA E++H+K N+   ++  TG   EK+ +D DRD +MS  EA EYGLIDGVI
Subjt:  QPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVI

AT1G11750.1 CLP protease proteolytic subunit 61.8e-3941.49Show/hide
Query:  PQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG
        P  P     G   D   +LFR RI+F+G  I+  VA  ++SQL+ L + D   DI +++N  GGS  + +AIYD +  ++  V T+A G+AAS  +++L 
Subjt:  PQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG

Query:  GGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD
        GG KG R AMPN R+M+HQP  G  G   DV  Q  E +  +  + R+ + FTG P EKVQ+  +RDR++S  EA+E+GLIDG+++ +
Subjt:  GGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD

AT1G11750.2 CLP protease proteolytic subunit 69.1e-3936.33Show/hide
Query:  SNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTG----------------PQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQL
        S +   LK+ LS + + S +K     PS    P  ++L +                 P  P     G   D   +LFR RI+F+G  I+  VA  ++SQL
Subjt:  SNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTG----------------PQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQL

Query:  LLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKN
        + L + D   DI +++N  GGS  + +AIYD +  ++  V T+A G+AAS  +++L GG KG R AMPN R+M+HQP  G  G   DV  Q  E +  + 
Subjt:  LLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKN

Query:  NVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD
         + R+ + FTG P EKVQ+  +RDR++S  EA+E+GLIDG+++ +
Subjt:  NVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD

AT1G66670.1 CLP protease proteolytic subunit 36.7e-5044.94Show/hide
Query:  GKPSNF------FPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSV----LMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLL
        GK  NF       PK        S+ S+ K     P +TL+    V    + +  Q+P       E D   +L R+RIVFLG+ +DD  AD ++SQLLLL
Subjt:  GKPSNF------FPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSV----LMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQLLLL

Query:  DAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVT
        DA+DS +DI LFINS GGS++A M IYD ++  +ADVST+ LG+AAS  + +L  G+KGKR  MPN+++M+HQPLG A G+A ++ I+ RE+M++K  + 
Subjt:  DAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVT

Query:  RIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID--KDGII
        +I S  TG P  +++ D DRD +++P EA EYGLID VID  K G+I
Subjt:  RIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID--KDGII

AT5G45390.1 CLP protease P41.8e-9567.35Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGP-----------QTPDAARRGAETDAMGLLFRE
        M  LS  S+L P   S  L +S    S+ FPK  +               LKP++ ++PP       P           QT ++A RGAE+D MGLL RE
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGP-----------QTPDAARRGAETDAMGLLFRE

Query:  RIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLG
        RIVFLG+SIDDFVADAIMSQLLLLDA+D  KDI+LFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN RIM+HQPLG
Subjt:  RIVFLGNSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLG

Query:  GASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDP
        GASGQAIDVEIQA+E+MHNKNNVT II+  T   FE+V KDIDRDRYMSPIEAVEYGLIDGVID D IIPL PVP+RVK  +NYEEISKDP
Subjt:  GASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTTCTTTCACGCTGTTCTACTCTTATTCCTCAGGCTTCCTCTCTCGGCCTTCCCAATTCTCATGGAAAACCATCAAATTTCTTCCCCAAGCTCAAATCCACTCT
ATCCTTTTCTTCGGCTTCATCAGTCCTCAAAACAACCGCTCTTAAACCCTCCAGAACCCTAGCTCCGCCGTGCTCCGTCCTTATGACTGGTCCACAGACGCCGGATGCCG
CCCGGAGAGGCGCCGAGACTGACGCCATGGGCCTGCTTTTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCATTGATGACTTTGTGGCCGATGCTATTATGAGTCAGCTC
TTGCTCTTGGATGCTCAGGACTCTACTAAAGATATTAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGtgctaccatggctatctacgatgttgtacagctcgtgcg
ggccgatgtatccactattgcactaggcattgcagcctcaacagcttccataatcctcggcggtggcactaaaggaaagcgtctcgcaatgcctaatgcacgtattatgg
tccatcaacctcttggaggggcgagtgggcaagcaatagatgtggaaattcaagcacgtgaaatcatgcataacaagaacaatgttacaagaatcatctccgaattcact
ggccatccatttgaaaaggtccaaaaagatatcgatagggatcgttatatgtcgcccatagaggctgtagaatatggattgattgatggagtgatcgacaaagatggcat
tatacctctcatgccagtgcccgaaagagtgaaggcaagtttaaattatgaagaaattagtaaagatccagaaaattcttga
mRNA sequenceShow/hide mRNA sequence
GATAAATGCATGGGTGGATTATTGAAATTTCCAAATTCCCCAAAAGTTTCGCAATCTGTATTTCTCACCCAACCAAATCCCCAAAGTCATCGTCTCTCCGCTTCTTCTTG
GTTTCGAGAGCTGAAGCAGAGCAGTGCTTGTAAAATCCATGGAGCTTCTTTCACGCTGTTCTACTCTTATTCCTCAGGCTTCCTCTCTCGGCCTTCCCAATTCTCATGGA
AAACCATCAAATTTCTTCCCCAAGCTCAAATCCACTCTATCCTTTTCTTCGGCTTCATCAGTCCTCAAAACAACCGCTCTTAAACCCTCCAGAACCCTAGCTCCGCCGTG
CTCCGTCCTTATGACTGGTCCACAGACGCCGGATGCCGCCCGGAGAGGCGCCGAGACTGACGCCATGGGCCTGCTTTTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCA
TTGATGACTTTGTGGCCGATGCTATTATGAGTCAGCTCTTGCTCTTGGATGCTCAGGACTCTACTAAAGATATTAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGt
gctaccatggctatctacgatgttgtacagctcgtgcgggccgatgtatccactattgcactaggcattgcagcctcaacagcttccataatcctcggcggtggcactaa
aggaaagcgtctcgcaatgcctaatgcacgtattatggtccatcaacctcttggaggggcgagtgggcaagcaatagatgtggaaattcaagcacgtgaaatcatgcata
acaagaacaatgttacaagaatcatctccgaattcactggccatccatttgaaaaggtccaaaaagatatcgatagggatcgttatatgtcgcccatagaggctgtagaa
tatggattgattgatggagtgatcgacaaagatggcattatacctctcatgccagtgcccgaaagagtgaaggcaagtttaaattatgaagaaattagtaaagatccaga
aaattcttgacaccagatgtccctgacgacgagatatattagtttcaggcgtttcggcaaacccttctctagggtttgatttatttcacatgtaggatcttagagtatca
acttttggcaaactgtctctacttaccagaagttaaaaggtattgggtattggactttttttttgtctgaaatttttaaATGAGCATTCTGAGGAAGGAAAAATTGAC
Protein sequenceShow/hide protein sequence
MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTALKPSRTLAPPCSVLMTGPQTPDAARRGAETDAMGLLFRERIVFLGNSIDDFVADAIMSQL
LLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFT
GHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDGIIPLMPVPERVKASLNYEEISKDPENS