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Clc10G01445 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G01445
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr10:1280526..1281947
RNA-Seq ExpressionClc10G01445
SyntenyClc10G01445
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150665.1 uncharacterized protein LOC101203762 isoform X2 [Cucumis sativus]3.1e-1888.68Show/hide
Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
        MGLD+MYWDDSMIVKAMDEAM KYKIMHGHEVP VS+EGGGV+NGCGKSDE K
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
XP_008448638.1 PREDICTED: uncharacterized protein LOC103490751 isoform X3 [Cucumis melo]2.8e-1990.57Show/hide
Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
        MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGV+N CGKSDE K
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
XP_016900686.1 PREDICTED: uncharacterized protein LOC103490751 isoform X1 [Cucumis melo]2.8e-1990.57Show/hide
Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
        MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGV+N CGKSDE K
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
XP_016900687.1 PREDICTED: uncharacterized protein LOC103490751 isoform X2 [Cucumis melo]2.8e-1990.57Show/hide
Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
        MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGV+N CGKSDE K
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
XP_031739471.1 uncharacterized protein LOC101203762 isoform X1 [Cucumis sativus]3.1e-1888.68Show/hide
Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
        MGLD+MYWDDSMIVKAMDEAM KYKIMHGHEVP VS+EGGGV+NGCGKSDE K
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
TrEMBL top hitse value%identityAlignment
A0A0A0L6D7 Uncharacterized protein1.5e-1888.68Show/hide
Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
        MGLD+MYWDDSMIVKAMDEAM KYKIMHGHEVP VS+EGGGV+NGCGKSDE K
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
A0A1S3BL18 uncharacterized protein LOC103490751 isoform X31.4e-1990.57Show/hide
Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
        MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGV+N CGKSDE K
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
A0A1S4DXH8 uncharacterized protein LOC103490751 isoform X11.4e-1990.57Show/hide
Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
        MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGV+N CGKSDE K
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
A0A1S4DXI5 uncharacterized protein LOC103490751 isoform X21.4e-1990.57Show/hide
Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
        MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGV+N CGKSDE K
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
A0A6J1HK48 uncharacterized protein LOC111465241 isoform X26.4e-1783.02Show/hide
Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
        M LDRMYWDDSMIVKAMDEAMLKYK MHG+++  VSAEGGGV NGCGKSDEP+
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTAGACAGAATGTATTGGGATGATTCCATGATTGTCAAAGCCATGGATGAAGCTATGTTGAAGTATAAGATAATGCATGGACATGAAGTTCCCTGTGTTTCAGC
TGAGGGAGGAGGAGTTTTAAATGGTTGCGGTAAGAGTGACGAGCCGAAAAGCTTTAGCAGCAAACCTCTCCTAAAAGACTTTTGTAAAGACTCAATCTTTGCAAGTAGGT
TTGGAAGGACAAACCTAGAAAAGGTGAAAAATCTTCATTTGGGAAGTCTAGTTGGGAATCTCTTCATTGAGAGCCCCTTCTCAAATTCCTCTAGGGAAGTCTCCATCCCA
GACTCACTCTTGCCTCTTTCTACAAAGGATTTTTGCAGGGATGATAATGGGGATGAATTCCCCATCCCGCCAGTTTTCTTGACACCCTGA
mRNA sequenceShow/hide mRNA sequence
GGTCCATTTGAGCAATTTTCCATGGCTTTGCCACCTACAGTTCTTTATAGACAGGTCGCGGCAAGCTGAGGCGGGAACACATTCCTTCAGGTTTTTTCTTCGCTTTACAA
TTGCATCACTCTCAGAGTTCCATCGAGAATATGGGGCTAGACAGAATGTATTGGGATGATTCCATGATTGTCAAAGCCATGGATGAAGCTATGTTGAAGTATAAGATAAT
GCATGGACATGAAGTTCCCTGTGTTTCAGCTGAGGGAGGAGGAGTTTTAAATGGTTGCGGTAAGAGTGACGAGCCGAAAAGCTTTAGCAGCAAACCTCTCCTAAAAGACT
TTTGTAAAGACTCAATCTTTGCAAGTAGGTTTGGAAGGACAAACCTAGAAAAGGTGAAAAATCTTCATTTGGGAAGTCTAGTTGGGAATCTCTTCATTGAGAGCCCCTTC
TCAAATTCCTCTAGGGAAGTCTCCATCCCAGACTCACTCTTGCCTCTTTCTACAAAGGATTTTTGCAGGGATGATAATGGGGATGAATTCCCCATCCCGCCAGTTTTCTT
GACACCCTGA
Protein sequenceShow/hide protein sequence
MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPKSFSSKPLLKDFCKDSIFASRFGRTNLEKVKNLHLGSLVGNLFIESPFSNSSREVSIP
DSLLPLSTKDFCRDDNGDEFPIPPVFLTP