CuGenDBv2

Gene ID	Clc10G01660
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Imidazole glycerol phosphate synthase hisHF, chloroplastic
Genome location	ClcChr10:1533501..1534184
RNA-Seq Expression	Clc10G01660
Synteny	Clc10G01660
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004148742.1 uncharacterized protein LOC101206077 [Cucumis sativus]

3.1e-108

91.63

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Query:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAA
        MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRL+TLCPDCANVRPCNCCATT T TTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAA
Subjt:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAA

Query:  IPFLRSRSRFVADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAKAWS
        IPFL  RSRFVADS DDCSS+GNSAR SSFW IF+SKSKK +DGGR+EAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAV+DSGGR VRPPVKAK W 
Subjt:  IPFLRSRSRFVADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAKAWS

Query:  FPSPIKAFRQSKISKPVLTERSPLHRG
        FPSPIKAFRQSK+ KPVLTERSPLHRG
Subjt:  FPSPIKAFRQSKISKPVLTERSPLHRG

XP_022923201.1 uncharacterized protein LOC111430968 [Cucurbita moschata]

2.2e-106

90.87

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Query:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRS
        MAFYGDEDD+WKCPKHPSKRRRIGICPLCLRDRL+TLCPDCANVRPCNCCATTT  TTSSSSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRS
Subjt:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRS

Query:  LAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAK
        LAAIPFLRSRSRFVADS DDCSS+GNSARASSFW IFRSK+KKS DGGRIEAAVE DF+RRAKEVAEVEEAMRR LMIRSRSVAVSDS GRFVR PVKAK
Subjt:  LAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAK

Query:  AWSFPSPIKAFRQSKISKPVLTERSPLHRG
        AW FPSPIKAFRQSK+ K VLTERSPLHRG
Subjt:  AWSFPSPIKAFRQSKISKPVLTERSPLHRG

XP_022965250.1 uncharacterized protein LOC111465171 [Cucurbita maxima]

1.3e-106

90.87

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Query:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRS
        MAFYGDEDD+WKCPKHPSKRRRIGICPLCLRDRL++LCPDCANVRPCNCCATTT  TTSSSSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRS
Subjt:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRS

Query:  LAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAK
        LAAIPFLRSRSRFVADS DDCSS+GNSARASSFW IFRSK+KKS DGGRIEAAVE DF+RRAKEVAEVEEAMRR LMIRSRSVAVSDS GRFVR PVKAK
Subjt:  LAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAK

Query:  AWSFPSPIKAFRQSKISKPVLTERSPLHRG
        AW FPSPIKAFRQSK+SK VLTERSPLHRG
Subjt:  AWSFPSPIKAFRQSKISKPVLTERSPLHRG

XP_023552753.1 uncharacterized protein LOC111810294 [Cucurbita pepo subsp. pepo]

2.5e-105

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Query:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRS
        MAFYGDEDD+WKCPKHPSKRRRIGICPLCLRDRL+TLCPDCA+VRPCNCCATTT  TTSSSSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRS
Subjt:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRS

Query:  LAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAK
        LAAIPFLRSRSRFVADS DDCSS+GNSARASSFW IFRSK+KKS DGGRIEAAVE DF+RRAKEVAEVEEAMRR LMIRSRSVAVSDS GRFVR P KAK
Subjt:  LAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAK

Query:  AWSFPSPIKAFRQSKISKPVLTERSPLHRG
        AW FPSPIKAFRQSK+ K VLTERSPLHRG
Subjt:  AWSFPSPIKAFRQSKISKPVLTERSPLHRG

XP_038905105.1 uncharacterized protein LOC120091238 [Benincasa hispida]

2.1e-112

93.83

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Query:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAA
        MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRL+TLCPDCANVRPCNCCATTTT TTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAA
Subjt:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAA

Query:  IPFLRSRSRFVADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAKAWS
        IPFLRSRSRFV D+VDDCSS+GNSARASSFW IFRSKSKKSHDGGR EA VEIDFRRRAKEVAE+EEAMRRKLMIRSRSVAV+DSGGR VRPPVKAKAW 
Subjt:  IPFLRSRSRFVADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAKAWS

Query:  FPSPIKAFRQSKISKPVLTERSPLHRG
        FPSPIK FRQSKISK VLTERSPLHRG
Subjt:  FPSPIKAFRQSKISKPVLTERSPLHRG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6G5 Uncharacterized protein

1.5e-108

91.63

Show/hide

Query:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAA
        MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRL+TLCPDCANVRPCNCCATT T TTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAA
Subjt:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAA

Query:  IPFLRSRSRFVADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAKAWS
        IPFL  RSRFVADS DDCSS+GNSAR SSFW IF+SKSKK +DGGR+EAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAV+DSGGR VRPPVKAK W 
Subjt:  IPFLRSRSRFVADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAKAWS

Query:  FPSPIKAFRQSKISKPVLTERSPLHRG
        FPSPIKAFRQSK+ KPVLTERSPLHRG
Subjt:  FPSPIKAFRQSKISKPVLTERSPLHRG

A0A1S3CQR3 uncharacterized protein LOC103503260

3.3e-103

89.47

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Query:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAA
        MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRL+TLCPDCANVRPCNCCATT T TTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAA
Subjt:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAA

Query:  IPFLRSRSRFVADSVDDCSSAG-NSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAKAW
        IPFL  RSRFVADSVDDCSS+G NSAR SSFW IFRSKSKK +DGG      EIDFRRRAKEVAEVEEAMRRKLMIRSRSVAV+DSGGR VRPPVK + W
Subjt:  IPFLRSRSRFVADSVDDCSSAG-NSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAKAW

Query:  SFPSPIKAFRQSKISKPVLTERSPLHRG
         FPSPIKAFRQ+KISKPVLTERSPLHRG
Subjt:  SFPSPIKAFRQSKISKPVLTERSPLHRG

A0A5A7UH78 Uncharacterized protein

3.3e-103

89.47

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Query:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAA
        MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRL+TLCPDCANVRPCNCCATT T TTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAA
Subjt:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAA

Query:  IPFLRSRSRFVADSVDDCSSAG-NSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAKAW
        IPFL  RSRFVADSVDDCSS+G NSAR SSFW IFRSKSKK +DGG      EIDFRRRAKEVAEVEEAMRRKLMIRSRSVAV+DSGGR VRPPVK + W
Subjt:  IPFLRSRSRFVADSVDDCSSAG-NSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAKAW

Query:  SFPSPIKAFRQSKISKPVLTERSPLHRG
         FPSPIKAFRQ+KISKPVLTERSPLHRG
Subjt:  SFPSPIKAFRQSKISKPVLTERSPLHRG

A0A6J1E664 uncharacterized protein LOC111430968

1.1e-106

90.87

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Query:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRS
        MAFYGDEDD+WKCPKHPSKRRRIGICPLCLRDRL+TLCPDCANVRPCNCCATTT  TTSSSSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRS
Subjt:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRS

Query:  LAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAK
        LAAIPFLRSRSRFVADS DDCSS+GNSARASSFW IFRSK+KKS DGGRIEAAVE DF+RRAKEVAEVEEAMRR LMIRSRSVAVSDS GRFVR PVKAK
Subjt:  LAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAK

Query:  AWSFPSPIKAFRQSKISKPVLTERSPLHRG
        AW FPSPIKAFRQSK+ K VLTERSPLHRG
Subjt:  AWSFPSPIKAFRQSKISKPVLTERSPLHRG

A0A6J1HN71 uncharacterized protein LOC111465171

6.3e-107

90.87

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Query:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRS
        MAFYGDEDD+WKCPKHPSKRRRIGICPLCLRDRL++LCPDCANVRPCNCCATTT  TTSSSSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRS
Subjt:  MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRS

Query:  LAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAK
        LAAIPFLRSRSRFVADS DDCSS+GNSARASSFW IFRSK+KKS DGGRIEAAVE DF+RRAKEVAEVEEAMRR LMIRSRSVAVSDS GRFVR PVKAK
Subjt:  LAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAK

Query:  AWSFPSPIKAFRQSKISKPVLTERSPLHRG
        AW FPSPIKAFRQSK+SK VLTERSPLHRG
Subjt:  AWSFPSPIKAFRQSKISKPVLTERSPLHRG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G32690.1 unknown protein

2.5e-31

42.37

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Query:  DEDDLWKCPKHPSKRRRI---GICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFS------RFSSADLGSVGRLSNLIDGEPAFRRSR
        DED   +C KH SKR      G+CP CL +RL +LCPDCA+  PC+C +      + SSSSSSSSFS       F+ + +GSVGR+++LI+ EPAFRRS+
Subjt:  DEDDLWKCPKHPSKRRRI---GICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFS------RFSSADLGSVGRLSNLIDGEPAFRRSR

Query:  SLAAIPFLRSRSRFVADSVDDCS-SAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPV-
        S+ AIP          DSV D     G S + SSFW IF         G R +                     +  +M +SRSVAV+   G F   PV 
Subjt:  SLAAIPFLRSRSRFVADSVDDCS-SAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPV-

Query:  ---KAKAWSFPSPIKAFRQSKISKPVLTERSPLHRG
           K K W+FPSPIK FRQS++SK +  +RSPL+RG
Subjt:  ---KAKAWSFPSPIKAFRQSKISKPVLTERSPLHRG

AT2G35200.1 unknown protein

2.1e-22

36.07

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Query:  KCPKHPSKRRRI-GICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRF
        KC +H  +   + G+CP CL +RL +LCPDCA+  PC+C   T   + SS      SF+R     +GSVGR++NLI+ EPAFRRS S+    F  ++   
Subjt:  KCPKHPSKRRRI-GICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRF

Query:  VADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPV--KAKAWSFPSPIKAF
        + ++  D        R    W +FR   ++     +I+AA                     K+M +S SVA       F   PV  K   W FPSPIK F
Subjt:  VADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPV--KAKAWSFPSPIKAF

Query:  RQSKISKPVLTERSPLHRG
        RQS++SK +  +RSPL+RG
Subjt:  RQSKISKPVLTERSPLHRG

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGTTCTATGGCGATGAAGACGACCTATGGAAATGTCCAAAACACCCTTCCAAACGGCGGAGGATCGGAATCTGTCCTCTCTGCCTCCGTGACCGTCTCCTCACCCT
CTGTCCTGACTGCGCCAATGTTCGCCCATGTAACTGTTGCGCCACCACCACTACTCCCACCACGTCTTCTTCTTCTTCTTCTTCTTCCTCTTTCTCTCGTTTCTCCTCCG
CCGACCTCGGATCTGTCGGCCGTCTCTCCAATCTCATCGACGGCGAGCCGGCTTTCCGTCGCTCTCGCTCTCTCGCTGCGATTCCGTTTCTTCGATCGAGATCGCGGTTT
GTCGCTGATTCTGTCGATGATTGTTCCTCGGCCGGTAATAGTGCTAGAGCGTCGTCGTTTTGGTGGATTTTCAGGTCGAAGAGTAAGAAGAGCCACGACGGCGGAAGAAT
CGAAGCGGCGGTGGAAATCGATTTCAGAAGGAGAGCGAAGGAAGTAGCGGAAGTTGAAGAGGCGATGAGACGGAAGTTGATGATCCGGTCGAGATCGGTTGCGGTTTCTG
ATTCCGGTGGGAGATTTGTCCGGCCGCCGGTAAAGGCTAAGGCATGGTCCTTTCCGAGTCCGATCAAAGCATTTCGGCAATCGAAGATTTCCAAGCCTGTTCTCACGGAA
CGGTCTCCGTTACACAGAGGTTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCATTTTPTTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRF
VADSVDDCSSAGNSARASSFWWIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGRFVRPPVKAKAWSFPSPIKAFRQSKISKPVLTE
RSPLHRG

Clc10G01660 (gene) of Watermelon (cordophanus) v2 genome