; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G01670 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G01670
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr10:1553549..1556142
RNA-Seq ExpressionClc10G01670
SyntenyClc10G01670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596727.1 hypothetical protein SDJN03_09907, partial [Cucurbita argyrosperma subsp. sororia]9.7e-4576.27Show/hide
Query:  MESEAKTSQCLSVGSEVGKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAEEGKIEGAFCECGEGWSCTISKVD-Q
        MESEAK  Q LSVGS   KGVLGKAYCK GEGWKCEIKRTQGPDAG TFVNCGNNC+CIIEG  +G VKL++LA EG  EGA CECGEGWSCTISK++  
Subjt:  MESEAKTSQCLSVGSEVGKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAEEGKIEGAFCECGEGWSCTISKVD-Q

Query:  DHPKPFAKCAGDCSCITL
           K FAKCAGDCSCIT+
Subjt:  DHPKPFAKCAGDCSCITL

XP_023005604.1 uncharacterized protein LOC111498543 [Cucurbita maxima]3.3e-4576.27Show/hide
Query:  MESEAKTSQCLSVGSEVGKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAEEGKIEGAFCECGEGWSCTISKVD-Q
        MESEAK  Q LSVGS   KGVLGKAYCK GEGWKCEIKRTQGPDAG TFVNCGNNC+CIIEG  +G VKL++LA EG  EGA CECGEGWSC+ISK++  
Subjt:  MESEAKTSQCLSVGSEVGKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAEEGKIEGAFCECGEGWSCTISKVD-Q

Query:  DHPKPFAKCAGDCSCITL
           KPFAKCAGDCSCIT+
Subjt:  DHPKPFAKCAGDCSCITL

XP_023540551.1 uncharacterized protein LOC111800878 isoform X2 [Cucurbita pepo subsp. pepo]5.1e-4676.03Show/hide
Query:  MESEAKTSQCLSVGSEV---GKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAEEGKIEGAFCECGEGWSCTISKV
        MESEAK  Q LSVGSEV    KGVLGKAYCK GEGWKCEIKRTQGPDAG TFVNCGNNC+CIIEG  +G VKL++LA EG  EGA CECGEGWSCTISK+
Subjt:  MESEAKTSQCLSVGSEV---GKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAEEGKIEGAFCECGEGWSCTISKV

Query:  D-QDHPKPFAKCAGDCSCITL
        +     K FAKCAGDCSCIT+
Subjt:  D-QDHPKPFAKCAGDCSCITL

XP_038905268.1 uncharacterized protein LOC120091343 isoform X1 [Benincasa hispida]1.3e-5283.9Show/hide
Query:  MESEAKTSQCL-SVGSEVGKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAEEGKIEGAFCECGEGWSCTISKVDQ
        MESEAK +Q L SVGSEV KGVLGKAYCK GEGWKCEIKRTQGPDAG TFVNCGNNCICIIEG G+G VKLE+LA+EG+ EGA CECGEGWSCTISK+DQ
Subjt:  MESEAKTSQCL-SVGSEVGKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAEEGKIEGAFCECGEGWSCTISKVDQ

Query:  DHPKPFAKCAGDCSCITL
          PKPFAKCAGDCSCIT+
Subjt:  DHPKPFAKCAGDCSCITL

XP_038905270.1 uncharacterized protein LOC120091343 isoform X2 [Benincasa hispida]5.1e-5484.62Show/hide
Query:  MESEAKTSQCLSVGSEVGKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAEEGKIEGAFCECGEGWSCTISKVDQD
        MESEAK +Q LSVGSEV KGVLGKAYCK GEGWKCEIKRTQGPDAG TFVNCGNNCICIIEG G+G VKLE+LA+EG+ EGA CECGEGWSCTISK+DQ 
Subjt:  MESEAKTSQCLSVGSEVGKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAEEGKIEGAFCECGEGWSCTISKVDQD

Query:  HPKPFAKCAGDCSCITL
         PKPFAKCAGDCSCIT+
Subjt:  HPKPFAKCAGDCSCITL

TrEMBL top hitse value%identityAlignment
A0A2P5BGV3 Uncharacterized protein1.7e-2354.74Show/hide
Query:  AYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAE-EGKIEG-AFCECGEGWSCTISKVDQ-DHPKPFAKCAGDCSCIT
        A+CK+ +GW C I RT+GPDAG TFV C  NC C++   G     +E   E E K EG  FC+CGEGWSC +SKV++ D  KPF +CAGDCSC+T
Subjt:  AYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAE-EGKIEG-AFCECGEGWSCTISKVDQ-DHPKPFAKCAGDCSCIT

A0A6J1CV46 uncharacterized protein LOC1110148572.2e-4271.79Show/hide
Query:  MESEAKTSQCLSVGSEVGKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAEEGKIEGAFCECGEGWSCTISKVDQD
        MESEAK++Q L      G   +GKAYCK GEGWKCEIK TQGPDAG TFVNCGNNCICIIEG  +GEVKL++LAEE  +EGA CECGEGWSCTISK++  
Subjt:  MESEAKTSQCLSVGSEVGKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAEEGKIEGAFCECGEGWSCTISKVDQD

Query:  HPKPFAKCAGDCSCITL
          K FAKCAGDCSCIT+
Subjt:  HPKPFAKCAGDCSCITL

A0A6J1EA88 uncharacterized protein LOC1114322444.7e-4576.27Show/hide
Query:  MESEAKTSQCLSVGSEVGKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAEEGKIEGAFCECGEGWSCTISKVD-Q
        MESEAK  Q LSVGS   KGVLGKAYCK GEGWKCEIKRTQGPDAG TFVNCGNNC+CIIEG  +G VKL++LA EG  EGA CECGEGWSCTISK++  
Subjt:  MESEAKTSQCLSVGSEVGKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAEEGKIEGAFCECGEGWSCTISKVD-Q

Query:  DHPKPFAKCAGDCSCITL
           K FAKCAGDCSCIT+
Subjt:  DHPKPFAKCAGDCSCITL

A0A6J1KZQ8 uncharacterized protein LOC1114985431.6e-4576.27Show/hide
Query:  MESEAKTSQCLSVGSEVGKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAEEGKIEGAFCECGEGWSCTISKVD-Q
        MESEAK  Q LSVGS   KGVLGKAYCK GEGWKCEIKRTQGPDAG TFVNCGNNC+CIIEG  +G VKL++LA EG  EGA CECGEGWSC+ISK++  
Subjt:  MESEAKTSQCLSVGSEVGKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAEEGKIEGAFCECGEGWSCTISKVD-Q

Query:  DHPKPFAKCAGDCSCITL
           KPFAKCAGDCSCIT+
Subjt:  DHPKPFAKCAGDCSCITL

A0A6P4BD71 uncharacterized protein LOC1074305954.6e-2450Show/hide
Query:  KTSQCLSVGSEVGKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEV----KLEKLAEEGKIEG---AFCECGEGWSCTISKVD
        ++S  ++V  + G     KA+CK GEGW C I RT+GPDAG TF  CG NC CIIE   DG V     L  L EE K  G   A+C+CGEGWSC +S+++
Subjt:  KTSQCLSVGSEVGKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEV----KLEKLAEEGKIEG---AFCECGEGWSCTISKVD

Query:  QDHP--KPFAKCAGDCSCIT
           P  KPF +CAG CSC+T
Subjt:  QDHP--KPFAKCAGDCSCIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGTGAGGCAAAAACCAGTCAATGTCTCAGTGTGGGGAGTGAAGTGGGAAAGGGAGTACTTGGGAAGGCATATTGCAAGCTAGGGGAAGGATGGAAATGTGAGAT
CAAAAGAACTCAAGGCCCTGATGCTGGCAACACCTTTGTTAACTGTGGCAACAACTGCATTTGTATAATAGAAGGGGCAGGGGATGGGGAAGTGAAGTTGGAGAAATTGG
CAGAGGAGGGGAAGATTGAAGGGGCATTTTGTGAGTGTGGAGAAGGTTGGAGCTGCACCATCTCAAAGGTTGATCAAGATCACCCCAAGCCCTTTGCTAAATGTGCTGGT
GATTGTTCTTGCATCACTCTTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGTGAGGCAAAAACCAGTCAATGTCTCAGTGTGGGGAGTGAAGTGGGAAAGGGAGTACTTGGGAAGGCATATTGCAAGCTAGGGGAAGGATGGAAATGTGAGAT
CAAAAGAACTCAAGGCCCTGATGCTGGCAACACCTTTGTTAACTGTGGCAACAACTGCATTTGTATAATAGAAGGGGCAGGGGATGGGGAAGTGAAGTTGGAGAAATTGG
CAGAGGAGGGGAAGATTGAAGGGGCATTTTGTGAGTGTGGAGAAGGTTGGAGCTGCACCATCTCAAAGGTTGATCAAGATCACCCCAAGCCCTTTGCTAAATGTGCTGGT
GATTGTTCTTGCATCACTCTTAATTGA
Protein sequenceShow/hide protein sequence
MESEAKTSQCLSVGSEVGKGVLGKAYCKLGEGWKCEIKRTQGPDAGNTFVNCGNNCICIIEGAGDGEVKLEKLAEEGKIEGAFCECGEGWSCTISKVDQDHPKPFAKCAG
DCSCITLN