; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G02760 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G02760
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1
Genome locationClcChr10:2823142..2823551
RNA-Seq ExpressionClc10G02760
SyntenyClc10G02760
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041077.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]1.3e-3775.19Show/hide
Query:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLA----------------------------RPPSELGCVQSLLPFHNAVAG
        MASACQRIASRISQSSF+TFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLA                            R PSELGCVQSLLPFH+AVAG
Subjt:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLA----------------------------RPPSELGCVQSLLPFHNAVAG

Query:  ARMISCLSTNSRSCRALSQGILCCTSPGL
        ARMISCLSTNSRSCRALSQGILCCTSPGL
Subjt:  ARMISCLSTNSRSCRALSQGILCCTSPGL

XP_004147213.1 uncharacterized protein LOC101221008 isoform X1 [Cucumis sativus]4.5e-4397.03Show/hide
Query:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSSF+TFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLAR PSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQGILCCTSPG
Subjt:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

XP_008448835.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis melo]3.8e-4296.04Show/hide
Query:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSSF+TFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLAR PSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQGILCCTSPG
Subjt:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

XP_022154046.1 uncharacterized protein LOC111021400 isoform X1 [Momordica charantia]1.2e-3890.1Show/hide
Query:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASAC RIASRISQSSF+  VRT S  KS SSPFPLPSKSTAPSVRRFSLAR PSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQG LCCTSPG
Subjt:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

XP_038903086.1 protein NONRESPONDING TO OXYLIPINS 2, mitochondrial isoform X1 [Benincasa hispida]3.8e-4294.06Show/hide
Query:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSSF+TFVRTN+SAKSSSSPFPLP+KSTAPSVRRFSLAR PSELGC+QSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCT PG
Subjt:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A0A0L1I6 Uncharacterized protein5.2e-3796.7Show/hide
Query:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASACQRIASRISQSSF+TFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLAR PSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

A0A1S3BKM3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X11.9e-4296.04Show/hide
Query:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSSF+TFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLAR PSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQGILCCTSPG
Subjt:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

A0A5A7THI0 Protein NUCLEAR FUSION DEFECTIVE 66.2e-3875.19Show/hide
Query:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLA----------------------------RPPSELGCVQSLLPFHNAVAG
        MASACQRIASRISQSSF+TFVRTNSSAKSSSS FPLPSKSTAPSVRRFSLA                            R PSELGCVQSLLPFH+AVAG
Subjt:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLA----------------------------RPPSELGCVQSLLPFHNAVAG

Query:  ARMISCLSTNSRSCRALSQGILCCTSPGL
        ARMISCLSTNSRSCRALSQGILCCTSPGL
Subjt:  ARMISCLSTNSRSCRALSQGILCCTSPGL

A0A6J1DMJ3 uncharacterized protein LOC111021400 isoform X15.6e-3990.1Show/hide
Query:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASAC RIASRISQSSF+  VRT S  KS SSPFPLPSKSTAPSVRRFSLAR PSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQG LCCTSPG
Subjt:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

A0A6J1EAY8 uncharacterized protein LOC111430946 isoform X12.0e-3686.14Show/hide
Query:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASAC+RIASRISQSS +T VRTNS  K+SSSPF LP   TAPSVRRFSLAR PSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQG LCCTSP 
Subjt:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

SwissProt top hitse value%identityAlignment
Q6NNL9 Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial9.3e-0739.6Show/hide
Query:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MAS C R  S+ + S+F++ +   S    S+S F        PS      +RP  +LG +QSLLP ++AVA AR+ SCL  +S++ R+L+QG+LC  +PG
Subjt:  MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        +
Subjt:  L

Arabidopsis top hitse value%identityAlignment
AT4G17310.1 unknown protein9.5e-2360.19Show/hide
Query:  MASACQRIASRISQSSFKTFVR--TNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTS
        MASAC+++ +R S SS K+ +R  T S++ +SS+ F LPS+ T    R FS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RALSQG LCCTS
Subjt:  MASACQRIASRISQSSFKTFVR--TNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTS

Query:  PGL
        P L
Subjt:  PGL

AT4G17310.2 unknown protein9.2e-1858.06Show/hide
Query:  MASACQRIASRISQSSFKTFVR--TNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASAC+++ +R S SS K+ +R  T S++ +SS+ F LPS+ T    R FS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RALSQ
Subjt:  MASACQRIASRISQSSFKTFVR--TNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

AT5G47455.1 unknown protein1.0e-1654.17Show/hide
Query:  RIASRISQSSFKTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQG
        R  SR S SSFK+ +R+          +S A +SS+ F +PSK  A  + RFS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSFKTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQG

AT5G47455.6 unknown protein1.0e-1654.17Show/hide
Query:  RIASRISQSSFKTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQG
        R  SR S SSFK+ +R+          +S A +SS+ F +PSK  A  + RFS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSFKTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQG

AT5G47455.7 unknown protein1.0e-1654.17Show/hide
Query:  RIASRISQSSFKTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQG
        R  SR S SSFK+ +R+          +S A +SS+ F +PSK  A  + RFS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSFKTFVRT----------NSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGCTTGCCAAAGAATTGCCAGCAGAATCTCTCAATCGTCTTTCAAAACATTCGTTCGTACGAATTCTTCCGCCAAATCTTCATCTTCTCCGTTCCCTCTACC
TTCCAAATCCACTGCACCATCTGTTCGCCGATTCTCGCTCGCCAGGCCTCCGTCGGAGCTGGGATGCGTGCAGTCCCTTTTGCCATTTCACAACGCGGTTGCTGGAGCGA
GAATGATTTCGTGTCTGAGCACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTATTCTCTGCTGCACCTCTCCCGGCCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCGCTTGCCAAAGAATTGCCAGCAGAATCTCTCAATCGTCTTTCAAAACATTCGTTCGTACGAATTCTTCCGCCAAATCTTCATCTTCTCCGTTCCCTCTACC
TTCCAAATCCACTGCACCATCTGTTCGCCGATTCTCGCTCGCCAGGCCTCCGTCGGAGCTGGGATGCGTGCAGTCCCTTTTGCCATTTCACAACGCGGTTGCTGGAGCGA
GAATGATTTCGTGTCTGAGCACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTATTCTCTGCTGCACCTCTCCCGGCCTCTAA
Protein sequenceShow/hide protein sequence
MASACQRIASRISQSSFKTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARPPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGILCCTSPGL