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Clc10G03030 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G03030
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
Genome locationClcChr10:3160501..3166077
RNA-Seq ExpressionClc10G03030
SyntenyClc10G03030
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR038863 - Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147198.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis sativus]3.8e-6596.06Show/hide
Query:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGKL+NLGS+ILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGG+PEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
XP_022923346.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita moschata]7.2e-6495.28Show/hide
Query:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+LSNLGSRILGGNGVV RSI SSLR RSGMGLPVGKHIVP+KPLPVNDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGGEPEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
XP_022950674.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita moschata]1.2e-6393.7Show/hide
Query:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+LSNLGS++LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KAS+IPFAPKVYPYDNLRVELGGE EA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
XP_022965223.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita maxima]1.4e-6496.06Show/hide
Query:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+LSNLGSRILGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGGEPEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
XP_038903151.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Benincasa hispida]7.7e-6697.64Show/hide
Query:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+LSNL SRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGGEPEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
TrEMBL top hitse value%identityAlignment
A0A0A0L5J8 Uncharacterized protein1.8e-6596.06Show/hide
Query:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGKL+NLGS+ILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGG+PEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
A0A1S3BK37 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial1.8e-6596.06Show/hide
Query:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGKL+NLGS+ILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGG+PEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
A0A6J1E6K0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial3.5e-6495.28Show/hide
Query:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+LSNLGSRILGGNGVV RSI SSLR RSGMGLPVGKHIVP+KPLPVNDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGGEPEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
A0A6J1HN93 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial7.0e-6596.06Show/hide
Query:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+LSNLGSRILGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGGEPEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
A0A6J1KTK9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like5.9e-6493.7Show/hide
Query:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+LSNLGS++LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KAS+IPFAPKVYPYDNLRVELGGE EA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
SwissProt top hitse value%identityAlignment
Q9FGK0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial3.6e-5884Show/hide
Query:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+LS + SRI+GGNGVV RS+ SSLR R+GMGLPVGKHIVPDKPL VNDEL+WDNGTAFPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV ND
Subjt:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEP
        KASK+PF P+VYPYDNLRVELGGEP
Subjt:  KASKIPFAPKVYPYDNLRVELGGEP
Arabidopsis top hitse value%identityAlignment
AT5G47570.1 unknown protein2.5e-5984Show/hide
Query:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+LS + SRI+GGNGVV RS+ SSLR R+GMGLPVGKHIVPDKPL VNDEL+WDNGTAFPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV ND
Subjt:  MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEP
        KASK+PF P+VYPYDNLRVELGGEP
Subjt:  KASKIPFAPKVYPYDNLRVELGGEP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATGGTCGAAAATTTGTAGACCTGGTCCACGAGTCCAGTCAAAGCTGCATGCATGCAGCATCAAGCGTGGCAGACTGGTGGCAGCATGGCAGTCTGTGTGGCACAG
TCAAAAGCGGAATCGTGTACCCAGTACACGATTTCAATGGCAATCGTGGACCAGAACAAGAACACAAAGGAGGAAGAGACGACGATTTGGGAATTTTGAAGAGCGAAAGC
CACCGGAAATGGCAGGCAAGCTGAGCAATTTGGGTTCAAGGATCCTTGGCGGAAATGGCGTTGTTGGTCGCTCAATCGCTTCATCTCTTCGACTTCGCTCCGGCATGGGC
CTTCCTGTCGGCAAACACATCGTCCCCGACAAACCCCTTCCTGTGAACGACGAACTGGTTTGGGATAATGGAACTGCTTTTCCCGAACCCTGTATTGATCGCATTGCAGA
TACGGTTGGAAAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTTTGGCTGTGTGGAACGATAAAGCGTCTAAGATACCATTTG
CACCAAAAGTGTATCCTTATGACAATCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGATGGTCGAAAATTTGTAGACCTGGTCCACGAGTCCAGTCAAAGCTGCATGCATGCAGCATCAAGCGTGGCAGACTGGTGGCAGCATGGCAGTCTGTGTGGCACAG
TCAAAAGCGGAATCGTGTACCCAGTACACGATTTCAATGGCAATCGTGGACCAGAACAAGAACACAAAGGAGGAAGAGACGACGATTTGGGAATTTTGAAGAGCGAAAGC
CACCGGAAATGGCAGGCAAGCTGAGCAATTTGGGTTCAAGGATCCTTGGCGGAAATGGCGTTGTTGGTCGCTCAATCGCTTCATCTCTTCGACTTCGCTCCGGCATGGGC
CTTCCTGTCGGCAAACACATCGTCCCCGACAAACCCCTTCCTGTGAACGACGAACTGGTTTGGGATAATGGAACTGCTTTTCCCGAACCCTGTATTGATCGCATTGCAGA
TACGGTTGGAAAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTTTGGCTGTGTGGAACGATAAAGCGTCTAAGATACCATTTG
CACCAAAAGTGTATCCTTATGACAATCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAG
Protein sequenceShow/hide protein sequence
MRWSKICRPGPRVQSKLHACSIKRGRLVAAWQSVWHSQKRNRVPSTRFQWQSWTRTRTQRRKRRRFGNFEERKPPEMAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMG
LPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVELGGEPEA