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Clc10G03070 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G03070
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Genome locationClcChr10:3231976..3232826
RNA-Seq ExpressionClc10G03070
SyntenyClc10G03070
Gene Ontology termsNA
InterPro domainsIPR027923 - Hydrophobic seed protein domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0611460.1 hypothetical protein [Gossypium davidsonii]3.5e-1645.11Show/hide
Query:  SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSP----------SGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSS
        S +S SLALFF LN+LF SL  A    P+P P          + G C       GACA VLGL+NV +  S  + PCCS +QGL D +AA C+C   K+ 
Subjt:  SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSP----------SGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSS

Query:  FNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC
         NV GI L +PV+   ++ LN C+R  PSGF C
Subjt:  FNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC

MBA0737184.1 hypothetical protein [Gossypium gossypioides]3.5e-1644.78Show/hide
Query:  SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSP-----------SGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKS
        S +S SLALFF LN+LF SL  A    P+P P           + G C       GACA VLGL+NV + +S  + PCCS +QGL D +AA C+C   K+
Subjt:  SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSP-----------SGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKS

Query:  SFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC
          NV GI L +PV+   ++ LN C+R  PSGF C
Subjt:  SFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC

TYK12005.1 14 kDa proline-rich protein DC2.15-like [Cucumis melo var. makuwa]1.2e-1647.5Show/hide
Query:  MSFSNKSFSLALFFCLNLLFSSLTIAQPVVPAPSPS--GGNCSIANSGACARVLGLINVGV-SNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGI
        MS  NK FSLALF+CL  LFSSL IAQP+VPAPSP+  G NCS+ N   CA VL  +NV + SN+Q + PCC  ++GL+  +A  CI +      N+ G+
Subjt:  MSFSNKSFSLALFFCLNLLFSSLTIAQPVVPAPSPS--GGNCSIANSGACARVLGLINVGV-SNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGI

Query:  R--LTLPVNTVSNIALNSCN
        R  + L    + NI    CN
Subjt:  R--LTLPVNTVSNIALNSCN

XP_022759926.1 14 kDa proline-rich protein DC2.15-like isoform X1 [Durio zibethinus]5.3e-1744.03Show/hide
Query:  SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSP-----------SGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKS
        S KS SLALFF LN+LF SL  A+   P+P P            GG C       G CA VLGL+NV +  S  + PCCS +QGL D +AA C+C   K+
Subjt:  SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSP-----------SGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKS

Query:  SFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC
          N+ GI L +PV+   ++ LN C++  PSGF C
Subjt:  SFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC

XP_039068122.1 14 kDa proline-rich protein DC2.15-like [Hibiscus syriacus]3.5e-1644.36Show/hide
Query:  SNKSFSLALFFCLNLLFSSLTIA----------QPVVPAPSPSGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSS
        S +S S+ALFF LN+LF SL  A              P+PSP+ G C       G CA+VLGL+N  V  S  + PCCS +QGL D +AAAC+C   K+ 
Subjt:  SNKSFSLALFFCLNLLFSSLTIA----------QPVVPAPSPSGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSS

Query:  FNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC
         NV GI L +PV+   ++ LN C++  PSGF C
Subjt:  FNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC

TrEMBL top hitse value%identityAlignment
A0A5D3CKE8 14 kDa proline-rich protein DC2.15-like5.8e-1747.5Show/hide
Query:  MSFSNKSFSLALFFCLNLLFSSLTIAQPVVPAPSPS--GGNCSIANSGACARVLGLINVGV-SNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGI
        MS  NK FSLALF+CL  LFSSL IAQP+VPAPSP+  G NCS+ N   CA VL  +NV + SN+Q + PCC  ++GL+  +A  CI +      N+ G+
Subjt:  MSFSNKSFSLALFFCLNLLFSSLTIAQPVVPAPSPS--GGNCSIANSGACARVLGLINVGV-SNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGI

Query:  R--LTLPVNTVSNIALNSCN
        R  + L    + NI    CN
Subjt:  R--LTLPVNTVSNIALNSCN

A0A6A3BJQ7 Lipid transfer protein EARLI 11.7e-1644.36Show/hide
Query:  SNKSFSLALFFCLNLLFSSLTIA----------QPVVPAPSPSGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSS
        S +S S+ALFF LN+LF SL  A              P+PSP+ G C       G CA+VLGL+N  V  S  + PCCS +QGL D +AAAC+C   K+ 
Subjt:  SNKSFSLALFFCLNLLFSSLTIA----------QPVVPAPSPSGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSS

Query:  FNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC
         NV GI L +PV+   ++ LN C++  PSGF C
Subjt:  FNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC

A0A6P6A5B7 14 kDa proline-rich protein DC2.15-like isoform X12.6e-1744.03Show/hide
Query:  SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSP-----------SGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKS
        S KS SLALFF LN+LF SL  A+   P+P P            GG C       G CA VLGL+NV +  S  + PCCS +QGL D +AA C+C   K+
Subjt:  SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSP-----------SGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKS

Query:  SFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC
          N+ GI L +PV+   ++ LN C++  PSGF C
Subjt:  SFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC

A0A7J8RD48 AAI domain-containing protein1.7e-1645.11Show/hide
Query:  SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSP----------SGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSS
        S +S SLALFF LN+LF SL  A    P+P P          + G C       GACA VLGL+NV +  S  + PCCS +QGL D +AA C+C   K+ 
Subjt:  SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSP----------SGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSS

Query:  FNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC
         NV GI L +PV+   ++ LN C+R  PSGF C
Subjt:  FNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC

A0A7J9BLX9 AAI domain-containing protein1.7e-1644.78Show/hide
Query:  SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSP-----------SGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKS
        S +S SLALFF LN+LF SL  A    P+P P           + G C       GACA VLGL+NV + +S  + PCCS +QGL D +AA C+C   K+
Subjt:  SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSP-----------SGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKS

Query:  SFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC
          NV GI L +PV+   ++ LN C+R  PSGF C
Subjt:  SFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC

SwissProt top hitse value%identityAlignment
P14009 14 kDa proline-rich protein DC2.159.8e-1436.23Show/hide
Query:  SNKSFSLALFFCLNLLFSSLTIA------------QPV---VPAPSPSGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICA
        S  S S+ALFF LN+LF +L  +            +P     P P PS G C       G CA VL L++  V  S    PCCS ++GL++ +AA C+C 
Subjt:  SNKSFSLALFFCLNLLFSSLTIA------------QPV---VPAPSPSGGNC--SIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICA

Query:  VAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC
          K+  N+ G  L LP+    ++ LN+C +  P+GF C
Subjt:  VAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC

Q39176 Lipid transfer protein EARLI 12.0e-1434.71Show/hide
Query:  SNKSFSLALFFCLNLLFSSLTIA------------------------------------QPVVPAPSP----------SGGNCSI--ANSGACARVL-GL
        S  S S+ALFF LN++F +LT A                                     P VP+P+P          S GNC I     G CA VL  L
Subjt:  SNKSFSLALFFCLNLLFSSLTIA------------------------------------QPVVPAPSP----------SGGNCSI--ANSGACARVL-GL

Query:  INVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC
        +N+ +       PCCS +QGL+D DAA C+C   ++  NV GI L +P++   ++ LN CNR  PSGF C
Subjt:  INVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC

Q9SU33 pEARLI1-like lipid transfer protein 31.3e-1334.64Show/hide
Query:  SNKSFSLALFFCLNLLFSSLTIA---------------------------------------------QPVVPAPSP----------SGGNCSI--ANSG
        S  S SLALFF LN+LF +LT A                                              P VP+P+P          S GNC I     G
Subjt:  SNKSFSLALFFCLNLLFSSLTIA---------------------------------------------QPVVPAPSP----------SGGNCSI--ANSG

Query:  ACARVL-GLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC
         CA VL GL+NV +       PCCS +QGL+D DAA C+C   ++  NV GI L +P++   ++ LN CNR  PS F C
Subjt:  ACARVL-GLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC

Q9SU34 pEARLI1-like lipid transfer protein 22.8e-1333.15Show/hide
Query:  SNKSFSLALFFCLNLLFSSLT--------------------------------------------------IAQPVVPAPSP----------SGGNCSI-
        S  S SLALFF LN+LF +LT                                                  +  P VP+P+P          S GNC I 
Subjt:  SNKSFSLALFFCLNLLFSSLT--------------------------------------------------IAQPVVPAPSP----------SGGNCSI-

Query:  -ANSGACARVL-GLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC
            G CA VL GL+NV +       PCCS +QGL+D DAA C+C   ++  NV GI L +P++   ++ LN CNR  PS F C
Subjt:  -ANSGACARVL-GLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC

Q9ZSP6 Putative lipid-binding protein AIR1B2.8e-1342.74Show/hide
Query:  SLALFFCLNLLFSSLTIAQPVVPAPSPSGGNCSIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGI-RLTLPVNTVS
        SLALF  LNLLF + T         S + G C I  S  CA VL L+++ + N   + PCCS +QGL D +AAAC+C   K+S  + GI  + LP+N   
Subjt:  SLALFFCLNLLFSSLTIAQPVVPAPSPSGGNCSIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGI-RLTLPVNTVS

Query:  NIALNSCNRTPPSGFNC
        ++ LN C+R  P GF C
Subjt:  NIALNSCNRTPPSGFNC

Arabidopsis top hitse value%identityAlignment
AT4G12470.1 azelaic acid induced 14.8e-1637.58Show/hide
Query:  SNKSFSLALFFCLNLLFSSLTIA----------------------------QPVVPAPSP-----------SGGNCSI--ANSGACARVL-GLINV--GV
        S  S SLALFF LN+LF +LT+A                            +P VP+P+P           SG +C I     G CA VL  L+N+  G 
Subjt:  SNKSFSLALFFCLNLLFSSLTIA----------------------------QPVVPAPSP-----------SGGNCSI--ANSGACARVL-GLINV--GV

Query:  SNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC
         +SQ    CCS +QGL+D DAA C+C   ++  NV GI L +P++   ++ LN CNR  PSGF C
Subjt:  SNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC

AT4G12480.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.4e-1534.71Show/hide
Query:  SNKSFSLALFFCLNLLFSSLTIA------------------------------------QPVVPAPSP----------SGGNCSI--ANSGACARVL-GL
        S  S S+ALFF LN++F +LT A                                     P VP+P+P          S GNC I     G CA VL  L
Subjt:  SNKSFSLALFFCLNLLFSSLTIA------------------------------------QPVVPAPSP----------SGGNCSI--ANSGACARVL-GL

Query:  INVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC
        +N+ +       PCCS +QGL+D DAA C+C   ++  NV GI L +P++   ++ LN CNR  PSGF C
Subjt:  INVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC

AT4G12490.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.0e-1433.15Show/hide
Query:  SNKSFSLALFFCLNLLFSSLT--------------------------------------------------IAQPVVPAPSP----------SGGNCSI-
        S  S SLALFF LN+LF +LT                                                  +  P VP+P+P          S GNC I 
Subjt:  SNKSFSLALFFCLNLLFSSLT--------------------------------------------------IAQPVVPAPSP----------SGGNCSI-

Query:  -ANSGACARVL-GLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC
            G CA VL GL+NV +       PCCS +QGL+D DAA C+C   ++  NV GI L +P++   ++ LN CNR  PS F C
Subjt:  -ANSGACARVL-GLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC

AT4G12500.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein9.1e-1534.64Show/hide
Query:  SNKSFSLALFFCLNLLFSSLTIA---------------------------------------------QPVVPAPSP----------SGGNCSI--ANSG
        S  S SLALFF LN+LF +LT A                                              P VP+P+P          S GNC I     G
Subjt:  SNKSFSLALFFCLNLLFSSLTIA---------------------------------------------QPVVPAPSP----------SGGNCSI--ANSG

Query:  ACARVL-GLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC
         CA VL GL+NV +       PCCS +QGL+D DAA C+C   ++  NV GI L +P++   ++ LN CNR  PS F C
Subjt:  ACARVL-GLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC

AT4G12545.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.0e-1442.74Show/hide
Query:  SLALFFCLNLLFSSLTIAQPVVPAPSPSGGNCSIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGI-RLTLPVNTVS
        SLALF  LNLLF + T         S + G C I  S  CA VL L+++ + N   + PCCS +QGL D +AAAC+C   K+S  + GI  + LP+N   
Subjt:  SLALFFCLNLLFSSLTIAQPVVPAPSPSGGNCSIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGI-RLTLPVNTVS

Query:  NIALNSCNRTPPSGFNC
        ++ LN C+R  P GF C
Subjt:  NIALNSCNRTPPSGFNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTCTCCAACAAATCCTTTTCACTTGCTCTCTTCTTTTGTCTCAACCTTCTCTTCTCTTCTCTTACCATTGCTCAGCCAGTTGTACCAGCGCCAAGCCCGAGTGG
AGGCAATTGCTCGATCGCCAATTCAGGTGCATGTGCAAGAGTACTTGGATTGATTAATGTAGGTGTTAGCAATAGCCAAGACTTAGGTCCATGTTGTAGCTTTGTTCAAG
GCCTACTGGACTTTGACGCTGCTGCTTGTATTTGTGCTGTTGCAAAGAGTTCATTTAATGTCTTTGGCATCCGTCTAACGCTACCCGTTAATACCGTGAGCAACATTGCA
CTTAACAGCTGCAACAGAACTCCTCCTTCTGGATTTAACTGCGTGGCCTAA
mRNA sequenceShow/hide mRNA sequence
TTAAAACTCATCATCTCATTTACCATAATTAACCCTATAAAAACCCTTCCATCAACACACTTTTTTCTCCATCCCTTAACCAAAGAGAGAAACCATCTCTACTTCATAAC
AAAGAAAAGAAAACATATCTCTTAAAAAAATGTCTTTCTCCAACAAATCCTTTTCACTTGCTCTCTTCTTTTGTCTCAACCTTCTCTTCTCTTCTCTTACCATTGCTCAG
CCAGTTGTACCAGCGCCAAGCCCGAGTGGAGGCAATTGCTCGATCGCCAATTCAGGTGCATGTGCAAGAGTACTTGGATTGATTAATGTAGGTGTTAGCAATAGCCAAGA
CTTAGGTCCATGTTGTAGCTTTGTTCAAGGCCTACTGGACTTTGACGCTGCTGCTTGTATTTGTGCTGTTGCAAAGAGTTCATTTAATGTCTTTGGCATCCGTCTAACGC
TACCCGTTAATACCGTGAGCAACATTGCACTTAACAGCTGCAACAGAACTCCTCCTTCTGGATTTAACTGCGTGGCCTAATTCACTCTATACAACTTCAAGAATGAGAGA
ACAAATAAGAAGTTGTAATACTTCATTTTATGTTTGTGCACCTATGTCTTTCCATATGTCGTATGTGTTTCTTTAGTTCAATAAGTTGGAGTCAAAGTATAGAGGTAAAG
ATTGAAAGACCTTCGACCTTGAAGCCGAAGGTACATAGATATCAATCTTAATCTTAATCATAAAAACTATACACTTCTTGTTGTCTTTTATTTTCATGTTTTGTAACACT
ATGAAATAAAACTAACTAATGTTGTTGTCCGTGTTTACATACAATTGTCAATAAAAAAGAACACATATCAGTAATAGGGGT
Protein sequenceShow/hide protein sequence
MSFSNKSFSLALFFCLNLLFSSLTIAQPVVPAPSPSGGNCSIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIA
LNSCNRTPPSGFNCVA