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Clc10G03080 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G03080
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Genome locationClcChr10:3245753..3246538
RNA-Seq ExpressionClc10G03080
SyntenyClc10G03080
Gene Ontology termsNA
InterPro domainsIPR027923 - Hydrophobic seed protein domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0554558.1 hypothetical protein [Gossypium lobatum]4.3e-1543.48Show/hide
Query:  SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLC
        ++K ++SLALFF LNILFFS+V+A    P+P       G      PSP+A   CP++ +++  C  VL   N+    PPV PCC L + L D EA  CLC
Subjt:  SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLC

Query:  LAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQCP
         AIK N++ I N N P++ + LLN C R    +G QCP
Subjt:  LAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQCP

MBA0680538.1 hypothetical protein [Gossypium aridum]1.1e-1544.2Show/hide
Query:  SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLC
        ++K ++SLALFF LNILFFS+V+A    P+P       G      PSP+A   CP++ +++  C  VL S N+    PPV PCC L + L D EA  CLC
Subjt:  SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLC

Query:  LAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQCP
         AIK N++ I N N P++ + LLN C R    +G QCP
Subjt:  LAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQCP

XP_004150819.1 putative lipid-binding protein AIR1B [Cucumis sativus]7.7e-4167.61Show/hide
Query:  MASSNKTTSSLALFFCLNILFFSVVTA-QIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFP-FLPPVPCCVLSRELPDREAV
        MASSNKTT SLALFFCLNILFF +VTA Q V PT  +G P +GS   DAPSP+    CPKN  +I  C A LN FNLFP FLPP  CC+L R L D EAV
Subjt:  MASSNKTTSSLALFFCLNILFFSVVTA-QIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFP-FLPPVPCCVLSRELPDREAV

Query:  ACLCLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQCP
        ACLC AIK N+V+IS  NRP+TPNR+LNAC RN+ATNGSQCP
Subjt:  ACLCLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQCP

XP_008449172.1 PREDICTED: putative lipid-binding protein AIR1B [Cucumis melo]2.3e-4569.5Show/hide
Query:  MASSNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFP-FLPPVPCCVLSRELPDREAVA
        MASSNKTT+SLALFFCLNILFFS+VTAQ VIPT  +G P++GS   DAPSP+    CPK  I+I SC A LN FNLFP F PP+PCC+L   LPD E VA
Subjt:  MASSNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFP-FLPPVPCCVLSRELPDREAVA

Query:  CLCLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQCP
        CLC AIK N+V+IS  NRP+TPNR+LNAC RNNA NGSQCP
Subjt:  CLCLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQCP

XP_022759926.1 14 kDa proline-rich protein DC2.15-like isoform X1 [Durio zibethinus]3.3e-1543.07Show/hide
Query:  SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLC
        ++K ++SLALFF LNILFFS+V+A+   P+P             +PSP+ G  CP++ +++  C  VL   N+    PPV PCC L + L D EA  CLC
Subjt:  SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLC

Query:  LAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQC
         AIK NI+ I N N P++ + LLN C + N  +G QC
Subjt:  LAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQC

TrEMBL top hitse value%identityAlignment
A0A0A0L6Y3 Hydrophob_seed domain-containing protein3.7e-4167.61Show/hide
Query:  MASSNKTTSSLALFFCLNILFFSVVTA-QIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFP-FLPPVPCCVLSRELPDREAV
        MASSNKTT SLALFFCLNILFF +VTA Q V PT  +G P +GS   DAPSP+    CPKN  +I  C A LN FNLFP FLPP  CC+L R L D EAV
Subjt:  MASSNKTTSSLALFFCLNILFFSVVTA-QIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFP-FLPPVPCCVLSRELPDREAV

Query:  ACLCLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQCP
        ACLC AIK N+V+IS  NRP+TPNR+LNAC RN+ATNGSQCP
Subjt:  ACLCLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQCP

A0A1S3BLF8 putative lipid-binding protein AIR1B1.1e-4569.5Show/hide
Query:  MASSNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFP-FLPPVPCCVLSRELPDREAVA
        MASSNKTT+SLALFFCLNILFFS+VTAQ VIPT  +G P++GS   DAPSP+    CPK  I+I SC A LN FNLFP F PP+PCC+L   LPD E VA
Subjt:  MASSNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFP-FLPPVPCCVLSRELPDREAVA

Query:  CLCLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQCP
        CLC AIK N+V+IS  NRP+TPNR+LNAC RNNA NGSQCP
Subjt:  CLCLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQCP

A0A5D3CNY9 Putative lipid-binding protein AIR1B1.1e-4569.5Show/hide
Query:  MASSNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFP-FLPPVPCCVLSRELPDREAVA
        MASSNKTT+SLALFFCLNILFFS+VTAQ VIPT  +G P++GS   DAPSP+    CPK  I+I SC A LN FNLFP F PP+PCC+L   LPD E VA
Subjt:  MASSNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFP-FLPPVPCCVLSRELPDREAVA

Query:  CLCLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQCP
        CLC AIK N+V+IS  NRP+TPNR+LNAC RNNA NGSQCP
Subjt:  CLCLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQCP

A0A6P6A5B7 14 kDa proline-rich protein DC2.15-like isoform X11.6e-1543.07Show/hide
Query:  SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLC
        ++K ++SLALFF LNILFFS+V+A+   P+P             +PSP+ G  CP++ +++  C  VL   N+    PPV PCC L + L D EA  CLC
Subjt:  SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLC

Query:  LAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQC
         AIK NI+ I N N P++ + LLN C + N  +G QC
Subjt:  LAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQC

A0A7J8WZV9 AAI domain-containing protein5.4e-1644.2Show/hide
Query:  SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLC
        ++K ++SLALFF LNILFFS+V+A    P+P       G      PSP+A   CP++ +++  C  VL S N+    PPV PCC L + L D EA  CLC
Subjt:  SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLC

Query:  LAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQCP
         AIK N++ I N N P++ + LLN C R    +G QCP
Subjt:  LAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQCP

SwissProt top hitse value%identityAlignment
P14009 14 kDa proline-rich protein DC2.151.4e-1338.69Show/hide
Query:  NKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFN--LFPFLPPVPCCVLSRELPDREAVACLC
        +K ++S+ALFF LNILFF++V++    P P    P         P P+AG  CP++ +++  C  VLN  +  +    P +PCC L   L + EA  CLC
Subjt:  NKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFN--LFPFLPPVPCCVLSRELPDREAVACLC

Query:  LAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQC
         AIK NI+   N N PI  + +LN CG+    NG +C
Subjt:  LAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQC

Q39176 Lipid transfer protein EARLI 15.6e-1030.95Show/hide
Query:  SNKTTSSLALFFCLNILFFSVVTAQIV--------------------------IPTPAVGGPVIGS----PAADAPSPTAGANCPKNFIEIVSCTAVLNS
        ++K ++S+ALFF LNI+FF++  A                             +P+P+V  P + S    P     +P +  NCP + + +  C  VL+S
Subjt:  SNKTTSSLALFFCLNILFFSVVTAQIV--------------------------IPTPAVGGPVIGS----PAADAPSPTAGANCPKNFIEIVSCTAVLNS

Query:  FNLFPFLPP--VPCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQC
                P   PCC L + L D +A  CLC A++ N++ I N N PI+ + LLN C R    +G QC
Subjt:  FNLFPFLPP--VPCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQC

Q9S7I2 Putative lipid-binding protein AIR13.2e-1342.31Show/hide
Query:  LALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLCLAIKRNI
        LALF  LN+LFF+  +A                        T G  CPKN IEI +C  VLN  +L    PPV PCC L + L D EA  CLC A+K +I
Subjt:  LALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLCLAIKRNI

Query:  VSISNPNRPITPNRLLNACGRNNATNGSQC
        + I N N PI  + LLN C R NA    QC
Subjt:  VSISNPNRPITPNRLLNACGRNNATNGSQC

Q9SU33 pEARLI1-like lipid transfer protein 33.0e-1133.33Show/hide
Query:  MASSNKTTSSLALFFCLNILFFSVVTA------------------------------QIVIPTPAVGGPVIGSPAADAPSPT---------AGANCPKNF
        MAS N T  SLALFF LNILFF++ TA                                 +PTP+V  P + +P+  +P+PT         +  NCP + 
Subjt:  MASSNKTTSSLALFFCLNILFFSVVTA------------------------------QIVIPTPAVGGPVIGSPAADAPSPT---------AGANCPKNF

Query:  IEIVSCTAVLNSFNLFPFLPP--VPCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPITPNRLLNACGR
        + +  C  VL+         P   PCC L + L D +A  CLC A++ N++ I N N PI+ + LLN C R
Subjt:  IEIVSCTAVLNSFNLFPFLPP--VPCCVLSRELPDREAVACLCLAIKRNIVSISNPNRPITPNRLLNACGR

Q9ZSP6 Putative lipid-binding protein AIR1B1.7e-1141.67Show/hide
Query:  SSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLCLAIKR
        +SLALF  LN+LFF+  +A                        T G  CP   I+I +C  VLN  +L    PPV PCC L + L D EA ACLC A+K 
Subjt:  SSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLCLAIKR

Query:  NIVSISNPNRPITPNRLLNACGRNNATNGSQC
        +I+ I N N PI  + LLN C R NA  G QC
Subjt:  NIVSISNPNRPITPNRLLNACGRNNATNGSQC

Arabidopsis top hitse value%identityAlignment
AT1G12090.1 extensin-like protein1.5e-1342.03Show/hide
Query:  TSSLALFFCLNILFFSVVTAQIVIPTPAVGG---PVIGSPAADAPSPTAGAN-CPKNFIEIVSCTAVLNS-FNLFPFLPPV-PCCVLSRELPDREAVACL
        +SS+ALF  LN+LFF+ ++A     TP  GG   P         PSP++G++ CPK+ +++  C  VLN   +L    PPV PCC L + L D EA  CL
Subjt:  TSSLALFFCLNILFFSVVTAQIVIPTPAVGG---PVIGSPAADAPSPTAGAN-CPKNFIEIVSCTAVLNS-FNLFPFLPPV-PCCVLSRELPDREAVACL

Query:  CLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQC
        C A+K NI+ I N N PI+ + LLN C +     G QC
Subjt:  CLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQC

AT1G62510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.9e-1339.33Show/hide
Query:  SNKTTSSLALFFCLNILFFSVVTA--QIVIPTPAVGGPVIGSP---------AADAPSPT-AGANCPKNFIEIVSCTAVLNS-FNLFPFLPPV-PCCVLS
        +++TT SLALF  LN LFF+ ++A      P+P        SP             PSP+ A A CP++ +++  C  VLN   N+    PPV PCC L 
Subjt:  SNKTTSSLALFFCLNILFFSVVTA--QIVIPTPAVGGPVIGSP---------AADAPSPT-AGANCPKNFIEIVSCTAVLNS-FNLFPFLPPV-PCCVLS

Query:  RELPDREAVACLCLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQC
        + L D EA ACLC A+K NI+ I N N P++ + LLN C +     G QC
Subjt:  RELPDREAVACLCLAIKRNIVSISNPNRPITPNRLLNACGRNNATNGSQC

AT4G12510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.1e-1237.21Show/hide
Query:  SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPF-LPPV-PCCVLSRELPDREAVACL
        ++K ++SL +F   NILFF++ T        A GG    +P    P P +  +CPK+ +++  C  VL          PPV PCC L   L D EA ACL
Subjt:  SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPF-LPPV-PCCVLSRELPDREAVACL

Query:  CLAIKRNIVSISNPNRPITPNRLLNACGR
        C A+K  ++ I N N P++ + LLN CG+
Subjt:  CLAIKRNIVSISNPNRPITPNRLLNACGR

AT4G12520.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.1e-1237.21Show/hide
Query:  SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPF-LPPV-PCCVLSRELPDREAVACL
        ++K ++SL +F   NILFF++ T        A GG    +P    P P +  +CPK+ +++  C  VL          PPV PCC L   L D EA ACL
Subjt:  SNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPF-LPPV-PCCVLSRELPDREAVACL

Query:  CLAIKRNIVSISNPNRPITPNRLLNACGR
        C A+K  ++ I N N P++ + LLN CG+
Subjt:  CLAIKRNIVSISNPNRPITPNRLLNACGR

AT4G12550.1 Auxin-Induced in Root cultures 12.2e-1442.31Show/hide
Query:  LALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLCLAIKRNI
        LALF  LN+LFF+  +A                        T G  CPKN IEI +C  VLN  +L    PPV PCC L + L D EA  CLC A+K +I
Subjt:  LALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPV-PCCVLSRELPDREAVACLCLAIKRNI

Query:  VSISNPNRPITPNRLLNACGRNNATNGSQC
        + I N N PI  + LLN C R NA    QC
Subjt:  VSISNPNRPITPNRLLNACGRNNATNGSQC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCATCCAACAAAACCACCTCCTCACTTGCTCTCTTTTTCTGCCTCAACATTCTCTTCTTCTCCGTAGTCACTGCTCAGATAGTAATTCCTACCCCCGCCGTCGG
TGGCCCCGTCATAGGCTCACCAGCCGCTGACGCTCCTAGTCCTACCGCCGGAGCTAATTGCCCTAAAAATTTCATCGAGATAGTTTCTTGTACAGCTGTTCTTAACAGCT
TTAATCTTTTTCCTTTCCTTCCACCCGTACCTTGTTGCGTGTTGTCTCGAGAGCTACCTGACCGTGAAGCTGTTGCTTGTCTTTGCCTTGCAATCAAACGTAATATTGTG
AGCATTAGCAATCCAAACAGACCCATTACTCCAAATCGACTTCTTAACGCATGTGGCAGAAATAATGCTACTAACGGATCCCAATGTCCCTAA
mRNA sequenceShow/hide mRNA sequence
GAAAGGGATAAAACATCTTCAAAGGCTTTTTTTTTCTCTTTTCCAAAATGGCTTCATCCAACAAAACCACCTCCTCACTTGCTCTCTTTTTCTGCCTCAACATTCTCTTC
TTCTCCGTAGTCACTGCTCAGATAGTAATTCCTACCCCCGCCGTCGGTGGCCCCGTCATAGGCTCACCAGCCGCTGACGCTCCTAGTCCTACCGCCGGAGCTAATTGCCC
TAAAAATTTCATCGAGATAGTTTCTTGTACAGCTGTTCTTAACAGCTTTAATCTTTTTCCTTTCCTTCCACCCGTACCTTGTTGCGTGTTGTCTCGAGAGCTACCTGACC
GTGAAGCTGTTGCTTGTCTTTGCCTTGCAATCAAACGTAATATTGTGAGCATTAGCAATCCAAACAGACCCATTACTCCAAATCGACTTCTTAACGCATGTGGCAGAAAT
AATGCTACTAACGGATCCCAATGTCCCTAATTTACTCTATACAACTCCAAGAAAGGAACAAATAACAAGTTTTTATATACTTAATTTTTAATTTATGTCTGCATGTTTTT
TCAGTTCAATAAATGTGGAGGTGTTGGGATTGAAGTTGGACCTCGAGGTCAAAGGTGTATAGATATCTTAACCACTAAACTATATACTCTAGTTGATGCTGGATGTCGAT
GTCGGTCTTTTATTTTTATGCTTTATATGATAGCTATGAAAAAAAAAATGAAAGTTTCTTATCTATGTAGTACTTGTGTGTGTTACACATAATATCAATAAAATATGCTA
TATTTGTAAGGTTAAA
Protein sequenceShow/hide protein sequence
MASSNKTTSSLALFFCLNILFFSVVTAQIVIPTPAVGGPVIGSPAADAPSPTAGANCPKNFIEIVSCTAVLNSFNLFPFLPPVPCCVLSRELPDREAVACLCLAIKRNIV
SISNPNRPITPNRLLNACGRNNATNGSQCP