; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G03630 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G03630
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTranscription initiation factor TFIID subunit 11
Genome locationClcChr10:3944189..3946977
RNA-Seq ExpressionClc10G03630
SyntenyClc10G03630
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0051123 - RNA polymerase II preinitiation complex assembly (biological process)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR006809 - TAFII28-like protein domain
IPR009072 - Histone-fold
IPR045127 - Transcription initiation factor TFIID subunit 11-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK19451.1 transcription initiation factor TFIID subunit 11 [Cucumis melo var. makuwa]8.2e-10695.91Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL
        MKQSKDPFEAAFEEQEESPPNSPSAADDLE+PT VAPVPADAFDLQDGDDDPKSA+VATHS TP +T SMFVSSSS+VSAAPKTKEDDEEEEEENVEVEL
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL

Query:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA
        AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA
Subjt:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA

Query:  YRRLKLEGKIPRKSVPRLFR
        YRRLKLEGKIPRKSVPRLFR
Subjt:  YRRLKLEGKIPRKSVPRLFR

XP_004147964.1 transcription initiation factor TFIID subunit 11 [Cucumis sativus]3.5e-10494.55Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL
        MKQSKDPFEAAFEEQEESPPNSPSAADDLE+PT VAP PADAFDLQDGDDDPKSA+VATHS  PA+T SMFVSSSS+VS APKTKEDDEEEEEENVEVEL
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL

Query:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA
        AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETARVVMTERND+GPIRPCHLREA
Subjt:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA

Query:  YRRLKLEGKIPRKSVPRLFR
        YRRLKLEGKIPRKSVPRLFR
Subjt:  YRRLKLEGKIPRKSVPRLFR

XP_016900577.1 PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis melo]2.4e-10595.45Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL
        MKQSKDPFEAAFEEQEESPPNSPSAADDLE+PT VAPVPADAFDLQDGDDDPKSA+VATHS TP +T SMFVSSSS+VSAAPKTKEDDEEEEEENVEVEL
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL

Query:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA
        AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLRE 
Subjt:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA

Query:  YRRLKLEGKIPRKSVPRLFR
        YRRLKLEGKIPRKSVPRLFR
Subjt:  YRRLKLEGKIPRKSVPRLFR

XP_022940909.1 transcription initiation factor TFIID subunit 11 [Cucurbita moschata]1.3e-9591.03Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNV-APVPADAFDLQDGDDDPKS-AAVATHSATP-ATTASMFVSSSSNVSAAPKTKEDDEEEEEENVE
        MKQSKDPFEAAFEEQEESPPNSPSAADDLE+ TNV A V ADA DL DGDD+PKS AA AT+S  P A+T S+FVSSSSNVSAAPKTKEDD+EEEEENVE
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNV-APVPADAFDLQDGDDDPKS-AAVATHSATP-ATTASMFVSSSSNVSAAPKTKEDDEEEEEENVE

Query:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHL
        VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETARVVMTERNDSG IRPCHL
Subjt:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHL

Query:  REAYRRLKLEGKIPRKSVPRLFR
        REAYRRLKLEGKIPRKSVPRLFR
Subjt:  REAYRRLKLEGKIPRKSVPRLFR

XP_038904708.1 transcription initiation factor TFIID subunit 11 isoform X2 [Benincasa hispida]2.1e-10194.14Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQD-GDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVE
        MKQSKDPFEAAFEEQEESPPNSPSA DDLE+PTNVAP  ADAFDLQD GDDD KSAAVATHSA PA++ SMFVSSSSNVSAAPKTKEDD+EEEEENVEVE
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQD-GDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVE

Query:  LAKFPSSGDPDK-MAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLR
        LAKFPSSGDPDK MAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLR
Subjt:  LAKFPSSGDPDK-MAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLR

Query:  EAYRRLKLEGKIPRKSVPRLFR
        EAYRRLKLEGKIPRKSVPRLFR
Subjt:  EAYRRLKLEGKIPRKSVPRLFR

TrEMBL top hitse value%identityAlignment
A0A0A0L5S4 TAFII28 domain-containing protein1.7e-10494.55Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL
        MKQSKDPFEAAFEEQEESPPNSPSAADDLE+PT VAP PADAFDLQDGDDDPKSA+VATHS  PA+T SMFVSSSS+VS APKTKEDDEEEEEENVEVEL
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL

Query:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA
        AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETARVVMTERND+GPIRPCHLREA
Subjt:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA

Query:  YRRLKLEGKIPRKSVPRLFR
        YRRLKLEGKIPRKSVPRLFR
Subjt:  YRRLKLEGKIPRKSVPRLFR

A0A1S4DX73 transcription initiation factor TFIID subunit 111.2e-10595.45Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL
        MKQSKDPFEAAFEEQEESPPNSPSAADDLE+PT VAPVPADAFDLQDGDDDPKSA+VATHS TP +T SMFVSSSS+VSAAPKTKEDDEEEEEENVEVEL
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL

Query:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA
        AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLRE 
Subjt:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA

Query:  YRRLKLEGKIPRKSVPRLFR
        YRRLKLEGKIPRKSVPRLFR
Subjt:  YRRLKLEGKIPRKSVPRLFR

A0A5D3D798 Transcription initiation factor TFIID subunit 114.0e-10695.91Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL
        MKQSKDPFEAAFEEQEESPPNSPSAADDLE+PT VAPVPADAFDLQDGDDDPKSA+VATHS TP +T SMFVSSSS+VSAAPKTKEDDEEEEEENVEVEL
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL

Query:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA
        AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA
Subjt:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREA

Query:  YRRLKLEGKIPRKSVPRLFR
        YRRLKLEGKIPRKSVPRLFR
Subjt:  YRRLKLEGKIPRKSVPRLFR

A0A6J1FLN4 transcription initiation factor TFIID subunit 116.4e-9691.03Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNV-APVPADAFDLQDGDDDPKS-AAVATHSATP-ATTASMFVSSSSNVSAAPKTKEDDEEEEEENVE
        MKQSKDPFEAAFEEQEESPPNSPSAADDLE+ TNV A V ADA DL DGDD+PKS AA AT+S  P A+T S+FVSSSSNVSAAPKTKEDD+EEEEENVE
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNV-APVPADAFDLQDGDDDPKS-AAVATHSATP-ATTASMFVSSSSNVSAAPKTKEDDEEEEEENVE

Query:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHL
        VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETARVVMTERNDSG IRPCHL
Subjt:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHL

Query:  REAYRRLKLEGKIPRKSVPRLFR
        REAYRRLKLEGKIPRKSVPRLFR
Subjt:  REAYRRLKLEGKIPRKSVPRLFR

A0A6J1KZI1 transcription initiation factor TFIID subunit 111.9e-9589.73Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNV-APVPADAFDLQDGDDDPK--SAAVATHSATP-ATTASMFVSSSSNVSAAPKTKEDDEEEEEENV
        MKQSKDPFEAAFEEQEESPPNSPSAADDLE+ TNV A   ADA DL DGDDDPK  +AA AT+S  P A+T S+FVSSSSN+SAAPKTKEDD+EEEEENV
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNV-APVPADAFDLQDGDDDPK--SAAVATHSATP-ATTASMFVSSSSNVSAAPKTKEDDEEEEEENV

Query:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCH
        EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKIS+PMTIVVSGIAKMFVGELVETARVVMTERNDSG IRPCH
Subjt:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCH

Query:  LREAYRRLKLEGKIPRKSVPRLFR
        LREAYRRLKLEGKIPRKSVPRLFR
Subjt:  LREAYRRLKLEGKIPRKSVPRLFR

SwissProt top hitse value%identityAlignment
F4HR03 Transcription initiation factor TFIID subunit 11b1.5e-3848.42Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL
        MK SKDPFEAA EEQEESP  +                        +GD+                             A  K K     E +   EVE 
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL

Query:  AKFPSSGDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLRE
         K  +  DP   A KMQ ILSQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVETARVVM ER +SGPIRPCH+RE
Subjt:  AKFPSSGDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLRE

Query:  AYRRLKLEGKIPRKSVPRLFR
        +YRRLKL+GK+P++SV RLFR
Subjt:  AYRRLKLEGKIPRKSVPRLFR

Q15544 Transcription initiation factor TFIID subunit 115.1e-1837.98Show/hide
Query:  EAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAA-----VATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKF
        E    ++  + P  P A D     T+  P   D     D D D K AA     + +   +  TT     SS  N  AA K K D +E++E+  +V     
Subjt:  EAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAA-----VATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKF

Query:  PSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRR
            D D++ KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  +  P++P H+REA RR
Subjt:  PSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRR

Query:  LKLEGKIP
        LK +G+IP
Subjt:  LKLEGKIP

Q5U1X0 Transcription initiation factor TFIID subunit 111.0e-1835.75Show/hide
Query:  EAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVS----AAPKTKEDDEEEEEENVEVELAKFP
        E    E+  + P +P +AD   +P     V         GD D K AA           + +  +   + S    AA K K D ++++E+  +V      
Subjt:  EAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVS----AAPKTKEDDEEEEEENVEVELAKFP

Query:  SSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRL
           D D++ KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  +  P++P H+REA RRL
Subjt:  SSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRL

Query:  KLEGKIP
        K +G+IP
Subjt:  KLEGKIP

Q99JX1 Transcription initiation factor TFIID subunit 111.0e-1836.23Show/hide
Query:  EAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVS----AAPKTKEDDEEEEEENVEVELAKFP
        E    E+  + P +  AAD   +P             +DGD D K AA           + +  +   N S    AA K K D ++++E+  +V      
Subjt:  EAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVS----AAPKTKEDDEEEEEENVEVELAKFP

Query:  SSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRL
           D D++ KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  ++ P++P H+REA RRL
Subjt:  SSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRL

Query:  KLEGKIP
        K +G+IP
Subjt:  KLEGKIP

Q9M565 Transcription initiation factor TFIID subunit 113.1e-5558.37Show/hide
Query:  MKQSKDPFEAAF-EEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVE
        MK SKDPFEAA  EEQEESPP SP         +    +  D    QD D+ P    V           S+ V+ + N     K K++D+EEEEEN++VE
Subjt:  MKQSKDPFEAAF-EEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVE

Query:  LAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLRE
        L K+P+S DP KMAKMQ ILSQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVETARVVM ER +SGPIRPCH+RE
Subjt:  LAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLRE

Query:  AYRRLKLEGKIPRKSVPRLFR
        +YRRLKLEGK+P++SVPRLFR
Subjt:  AYRRLKLEGKIPRKSVPRLFR

Arabidopsis top hitse value%identityAlignment
AT1G20000.1 TBP-associated factor 11B1.1e-3948.42Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL
        MK SKDPFEAA EEQEESP  +                        +GD+                             A  K K     E +   EVE 
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVEL

Query:  AKFPSSGDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLRE
         K  +  DP   A KMQ ILSQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVETARVVM ER +SGPIRPCH+RE
Subjt:  AKFPSSGDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLRE

Query:  AYRRLKLEGKIPRKSVPRLFR
        +YRRLKL+GK+P++SV RLFR
Subjt:  AYRRLKLEGKIPRKSVPRLFR

AT4G20280.1 TBP-associated factor 112.2e-5658.37Show/hide
Query:  MKQSKDPFEAAF-EEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVE
        MK SKDPFEAA  EEQEESPP SP         +    +  D    QD D+ P    V           S+ V+ + N     K K++D+EEEEEN++VE
Subjt:  MKQSKDPFEAAF-EEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVE

Query:  LAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLRE
        L K+P+S DP KMAKMQ ILSQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVETARVVM ER +SGPIRPCH+RE
Subjt:  LAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLRE

Query:  AYRRLKLEGKIPRKSVPRLFR
        +YRRLKLEGK+P++SVPRLFR
Subjt:  AYRRLKLEGKIPRKSVPRLFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAATCAAAGGACCCATTTGAAGCGGCGTTTGAAGAGCAGGAGGAATCGCCTCCGAACTCCCCCTCTGCCGCCGACGACCTCGAAGTTCCGACCAATGTTGCCCC
TGTTCCTGCCGACGCTTTTGATTTGCAAGACGGCGACGATGATCCAAAATCCGCTGCTGTTGCTACACATTCCGCTACTCCTGCAACCACCGCTTCTATGTTTGTTTCCT
CTTCCTCCAATGTCTCTGCCGCCCCTAAAACCAAAGAAGACGATGAGGAAGAAGAGGAAGAGAATGTCGAAGTTGAACTTGCCAAATTTCCCTCCAGCGGTGATCCAGAT
AAGATGGCAAAGATGCAAGCCATTTTGTCACAATTTACTGAAGAACAGATGAGTCGATATGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTGTT
AGCAAGCATCTCGGGAACGCAGAAAATTTCTATACCGATGACGATCGTAGTGTCTGGGATAGCAAAGATGTTTGTTGGTGAACTTGTAGAAACAGCAAGAGTTGTTATGA
CAGAGCGGAATGATTCTGGACCTATCAGGCCATGCCATCTCAGAGAAGCATATAGAAGATTAAAGCTTGAAGGTAAGATTCCACGGAAATCAGTGCCTAGGCTCTTTCGC
TAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAATCAAAGGACCCATTTGAAGCGGCGTTTGAAGAGCAGGAGGAATCGCCTCCGAACTCCCCCTCTGCCGCCGACGACCTCGAAGTTCCGACCAATGTTGCCCC
TGTTCCTGCCGACGCTTTTGATTTGCAAGACGGCGACGATGATCCAAAATCCGCTGCTGTTGCTACACATTCCGCTACTCCTGCAACCACCGCTTCTATGTTTGTTTCCT
CTTCCTCCAATGTCTCTGCCGCCCCTAAAACCAAAGAAGACGATGAGGAAGAAGAGGAAGAGAATGTCGAAGTTGAACTTGCCAAATTTCCCTCCAGCGGTGATCCAGAT
AAGATGGCAAAGATGCAAGCCATTTTGTCACAATTTACTGAAGAACAGATGAGTCGATATGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTGTT
AGCAAGCATCTCGGGAACGCAGAAAATTTCTATACCGATGACGATCGTAGTGTCTGGGATAGCAAAGATGTTTGTTGGTGAACTTGTAGAAACAGCAAGAGTTGTTATGA
CAGAGCGGAATGATTCTGGACCTATCAGGCCATGCCATCTCAGAGAAGCATATAGAAGATTAAAGCTTGAAGGTAAGATTCCACGGAAATCAGTGCCTAGGCTCTTTCGC
TAA
Protein sequenceShow/hide protein sequence
MKQSKDPFEAAFEEQEESPPNSPSAADDLEVPTNVAPVPADAFDLQDGDDDPKSAAVATHSATPATTASMFVSSSSNVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPD
KMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISIPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR