; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G03640 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G03640
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRetrotransposable element Tf2
Genome locationClcChr10:3952629..3953867
RNA-Seq ExpressionClc10G03640
SyntenyClc10G03640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040828.1 polyprotein [Cucumis melo var. makuwa]1.3e-22493.14Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPT PNKRAASPAASSS+S IPRNPSSYSQIVRP +FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEPEFDGPSV EVC+QIFPHGFNFL ED SKTRTFYEYILVDSKSA+ITH+PDKNDPSKIIYSKLRIFRVLTP YW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDYTKAWYIVFWLQAYNH WFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        K LSKSLRIKWWEK+NYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVM+TLAGASTQQEFNSVVNNVVVNLSDDND+LPEDASPASVN+VDDLD
Subjt:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGID
        YDP+EG++
Subjt:  YDPFEGID

KAA0056777.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]8.4e-22994.85Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTTPNKRAASPAASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEPEFDGPSV EVC QIFPHGFNFLPED SKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        K LSKSLRIKWWEK+NYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVM+TLAGASTQQEFNSVVNNVVVNLSDDND+LPED SPASVNNVDD D
Subjt:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGID
        YDP+EG+D
Subjt:  YDPFEGID

KAA0063832.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]2.4e-22894.61Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTTPNKRAASPAASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEPEFDGPSV EVC QIFPHGFNFLPED SKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        K LSKSLRIKWWEK+NYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVM+TLAGASTQQEFNSVVNNVVVNLSDDND+LPED SPASVNN DD D
Subjt:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGID
        YDP+EG+D
Subjt:  YDPFEGID

KAA0068172.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]8.4e-22994.85Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTTPNKRAASPAASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEP+FDGPSV EVC QIFPHGFNFLPED SKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        K LSKSLRIKWWEK+NYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVM+TLAGASTQQEFNSVVNNVVVNLSDDND+LPED SPASVNNVDDLD
Subjt:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGID
        YDP+EG+D
Subjt:  YDPFEGID

TYK28077.1 polyprotein [Cucumis melo var. makuwa]2.5e-22593.63Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTT N RAASP ASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEPEFDGPSV EVC QIFPHGFNFLPED SKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDYTKAWYIVFWL AYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVE+QRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        K LSKSL IKWWEK+NYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVM+TLAGASTQQEFNSVVNNVVVNLSDDND+LPEDASPASVN+VDDLD
Subjt:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGID
        YDP+EG+D
Subjt:  YDPFEGID

TrEMBL top hitse value%identityAlignment
A0A5A7TD15 Polyprotein6.1e-22593.14Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPT PNKRAASPAASSS+S IPRNPSSYSQIVRP +FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEPEFDGPSV EVC+QIFPHGFNFL ED SKTRTFYEYILVDSKSA+ITH+PDKNDPSKIIYSKLRIFRVLTP YW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDYTKAWYIVFWLQAYNH WFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        K LSKSLRIKWWEK+NYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVM+TLAGASTQQEFNSVVNNVVVNLSDDND+LPEDASPASVN+VDDLD
Subjt:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGID
        YDP+EG++
Subjt:  YDPFEGID

A0A5A7UVN1 Retrotransposable element Tf24.1e-22994.85Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTTPNKRAASPAASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEPEFDGPSV EVC QIFPHGFNFLPED SKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        K LSKSLRIKWWEK+NYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVM+TLAGASTQQEFNSVVNNVVVNLSDDND+LPED SPASVNNVDD D
Subjt:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGID
        YDP+EG+D
Subjt:  YDPFEGID

A0A5A7V6D1 Retrotransposable element Tf21.2e-22894.61Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTTPNKRAASPAASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEPEFDGPSV EVC QIFPHGFNFLPED SKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        K LSKSLRIKWWEK+NYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVM+TLAGASTQQEFNSVVNNVVVNLSDDND+LPED SPASVNN DD D
Subjt:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGID
        YDP+EG+D
Subjt:  YDPFEGID

A0A5A7VIK9 Retrotransposable element Tf24.1e-22994.85Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTTPNKRAASPAASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEP+FDGPSV EVC QIFPHGFNFLPED SKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        K LSKSLRIKWWEK+NYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVM+TLAGASTQQEFNSVVNNVVVNLSDDND+LPED SPASVNNVDDLD
Subjt:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGID
        YDP+EG+D
Subjt:  YDPFEGID

A0A5D3DW87 Polyprotein1.2e-22593.63Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTT N RAASP ASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEPEFDGPSV EVC QIFPHGFNFLPED SKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF
        YRDYTKAWYIVFWL AYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVE+QRSYHLFQQSIYSSPLSKTFRFALYFQIPWI CWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNF

Query:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        K LSKSL IKWWEK+NYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVM+TLAGASTQQEFNSVVNNVVVNLSDDND+LPEDASPASVN+VDDLD
Subjt:  KTLSKSLRIKWWEKYNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGID
        YDP+EG+D
Subjt:  YDPFEGID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCAGAAAACTACTCCATGGATATACAATTTGAACAGGTATCCAGGAGACGTCAAGGTTCTGCTCAAAGAACCCTAACTATTCAATCAGACCATTCGAGTCTTCC
TCCAATTCCTTCAAACACCTTGTTACGACCTTCCGGGCCAACAACCCCAAATAAGCGTGCCGCTTCCCCAGCCGCTTCTTCCTCAAAGTCTGTAATTCCGAGGAATCCTT
CCTCGTATTCTCAAATAGTCAGGCCAAAGGTATTCCAACCTAGACCTCCAATTAATGGTTATTTCACCAAAACCACAATGGTTGATTTAACCATAGAACCAGAATTCGAT
GGACCCTCCGTTCACGAAGTCTGCGATCAAATATTTCCTCACGGGTTTAACTTCTTACCTGAGGATTTTTCAAAAACCAGAACCTTCTACGAGTATATTTTAGTTGATTC
AAAATCAGCTGAAATTACTCACGTCCCAGATAAAAATGATCCCTCTAAGATCATTTATTCTAAGTTGAGAATATTTCGTGTCCTCACTCCATCCTACTGGAGACAAGGGA
TGTTTGTAGGAAGAAAATTCTCTCACCCTTTCAAACCACCATCATACAATTACCGTGACTATACAAAAGCATGGTATATTGTATTTTGGCTTCAAGCATACAACCACTCT
TGGTTTGTAACATTTTGTAAACAAGCTTACAAAATGCACTTTCCAAACTGGTTTCAAAATTGGTGGATGTACTTTGGACTCTCTGAAGAAATATTTCCGGTAGAAGTTCA
ACGATCATATCACCTTTTTCAACAAAGTATCTATTCGTCACCTCTTTCAAAGACGTTTAGATTTGCTTTGTATTTCCAAATTCCCTGGATCTTGTGCTGGAATTTCCAGC
TAGGACCTTCAGGAAACTTCAAAACTCTGAGTAAATCCCTCAGAATCAAATGGTGGGAAAAGTATAATTACTCCCATCTCGAAGTCAATAAAATCAAGGATTGGTTTAAA
GCCAATATTCATCTCCAGGATATGACTAGGCAAGAGGACGAAGCCTTTCTCCTCACTAAAAACGCAGTCATGACCACCCTTGCCGGAGCAAGCACTCAACAGGAATTCAA
TTCTGTTGTCAATAACGTCGTTGTAAACCTTTCGGACGATAACGACGAATTACCGGAGGACGCTTCCCCAGCCTCCGTTAATAACGTCGATGACCTAGATTATGATCCGT
TCGAGGGCATCGATAGCACCACATACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGCAGAAAACTACTCCATGGATATACAATTTGAACAGGTATCCAGGAGACGTCAAGGTTCTGCTCAAAGAACCCTAACTATTCAATCAGACCATTCGAGTCTTCC
TCCAATTCCTTCAAACACCTTGTTACGACCTTCCGGGCCAACAACCCCAAATAAGCGTGCCGCTTCCCCAGCCGCTTCTTCCTCAAAGTCTGTAATTCCGAGGAATCCTT
CCTCGTATTCTCAAATAGTCAGGCCAAAGGTATTCCAACCTAGACCTCCAATTAATGGTTATTTCACCAAAACCACAATGGTTGATTTAACCATAGAACCAGAATTCGAT
GGACCCTCCGTTCACGAAGTCTGCGATCAAATATTTCCTCACGGGTTTAACTTCTTACCTGAGGATTTTTCAAAAACCAGAACCTTCTACGAGTATATTTTAGTTGATTC
AAAATCAGCTGAAATTACTCACGTCCCAGATAAAAATGATCCCTCTAAGATCATTTATTCTAAGTTGAGAATATTTCGTGTCCTCACTCCATCCTACTGGAGACAAGGGA
TGTTTGTAGGAAGAAAATTCTCTCACCCTTTCAAACCACCATCATACAATTACCGTGACTATACAAAAGCATGGTATATTGTATTTTGGCTTCAAGCATACAACCACTCT
TGGTTTGTAACATTTTGTAAACAAGCTTACAAAATGCACTTTCCAAACTGGTTTCAAAATTGGTGGATGTACTTTGGACTCTCTGAAGAAATATTTCCGGTAGAAGTTCA
ACGATCATATCACCTTTTTCAACAAAGTATCTATTCGTCACCTCTTTCAAAGACGTTTAGATTTGCTTTGTATTTCCAAATTCCCTGGATCTTGTGCTGGAATTTCCAGC
TAGGACCTTCAGGAAACTTCAAAACTCTGAGTAAATCCCTCAGAATCAAATGGTGGGAAAAGTATAATTACTCCCATCTCGAAGTCAATAAAATCAAGGATTGGTTTAAA
GCCAATATTCATCTCCAGGATATGACTAGGCAAGAGGACGAAGCCTTTCTCCTCACTAAAAACGCAGTCATGACCACCCTTGCCGGAGCAAGCACTCAACAGGAATTCAA
TTCTGTTGTCAATAACGTCGTTGTAAACCTTTCGGACGATAACGACGAATTACCGGAGGACGCTTCCCCAGCCTCCGTTAATAACGTCGATGACCTAGATTATGATCCGT
TCGAGGGCATCGATAGCACCACATACTAA
Protein sequenceShow/hide protein sequence
MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTMVDLTIEPEFD
GPSVHEVCDQIFPHGFNFLPEDFSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHS
WFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWILCWNFQLGPSGNFKTLSKSLRIKWWEKYNYSHLEVNKIKDWFK
ANIHLQDMTRQEDEAFLLTKNAVMTTLAGASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLDYDPFEGIDSTTY