; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G03660 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G03660
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEnzymatic polyprotein
Genome locationClcChr10:3955350..3956704
RNA-Seq ExpressionClc10G03660
SyntenyClc10G03660
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR028919 - Viral movement protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032920.1 movement protein [Cucumis melo var. makuwa]1.2e-6866.67Show/hide
Query:  MLTKLLSKLSPHSPAVIDATCSSS----SNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ-----------------------------
        ML++LLSKLSPHSP +IDAT SSS    S+NSRSQ+DLSTALA HNTAEAHLAQVENRLKNWSIPKLEA+Q                             
Subjt:  MLTKLLSKLSPHSPAVIDATCSSS----SNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ-----------------------------

Query:  ------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGL
                                      PLFREGLDVPVYLALRDKRHL+FTPSLLGIVQSNLEQGPVYFNCRP LTVSLQD+NIM+TISLDVHSQGL
Subjt:  ------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGL

Query:  ELKDGSLPFAVSYRIYFKLMHTNLSPKA
        ELKDGSLPFAVSYRIYFKLMHTNLSPKA
Subjt:  ELKDGSLPFAVSYRIYFKLMHTNLSPKA

KAA0052109.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.4e-6967.25Show/hide
Query:  MLTKLLSKLSPHSPAVIDATCSSS----SNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ-----------------------------
        ML+KLLSKLSPHSP +IDAT SSS    S+NSRSQ+DLSTALA HNTAEAHLAQVENRLKNWSIPKLEA+Q                             
Subjt:  MLTKLLSKLSPHSPAVIDATCSSS----SNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ-----------------------------

Query:  ------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGL
                                      PLFREGLDVPVYLALRDKRHL+FTPSLLGIVQSNLEQGPVYFNCRP LTVSLQD+NIM+TISLDVHSQGL
Subjt:  ------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGL

Query:  ELKDGSLPFAVSYRIYFKLMHTNLSPKAL
        ELKDGSLPFAVSYRIYFKLMHTNLSPKAL
Subjt:  ELKDGSLPFAVSYRIYFKLMHTNLSPKAL

KAA0059217.1 Enzymatic polyprotein [Cucumis melo var. makuwa]4.6e-6866.09Show/hide
Query:  MLTKLLSKLSPHSPAVIDATC-----SSSSNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ----------------------------
        ML+KLLSKLSPHSPA+IDAT      SSS +N RS+ DLSTALA HN+AEAHLAQVENRLKNWSIPKLEANQ                            
Subjt:  MLTKLLSKLSPHSPAVIDATC-----SSSSNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ----------------------------

Query:  -------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQG
                                       PLFREGLDVPVYLALRDKRHL+FTPSLLGIVQSNLEQGPVYFNCRP LTVSLQD+NIM+TISLDVHSQG
Subjt:  -------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQG

Query:  LELKDGSLPFAVSYRIYFKLMHTNLSPKAL
        LELKDGSLPFAVSYRIYFKLMHTNLSPKAL
Subjt:  LELKDGSLPFAVSYRIYFKLMHTNLSPKAL

TYJ98087.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.4e-6967.25Show/hide
Query:  MLTKLLSKLSPHSPAVIDATCSSS----SNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ-----------------------------
        ML+KLLSKLSPHSP +IDAT SSS    S+NSRSQ+DLSTALA HNTAEAHLAQVENRLKNWSIPKLEA+Q                             
Subjt:  MLTKLLSKLSPHSPAVIDATCSSS----SNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ-----------------------------

Query:  ------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGL
                                      PLFREGLDVPVYLALRDKRHL+FTPSLLGIVQSNLEQGPVYFNCRP LTVSLQD+NIM+TISLDVHSQGL
Subjt:  ------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGL

Query:  ELKDGSLPFAVSYRIYFKLMHTNLSPKAL
        ELKDGSLPFAVSYRIYFKLMHTNLSPKAL
Subjt:  ELKDGSLPFAVSYRIYFKLMHTNLSPKAL

TYK28080.1 movement protein [Cucumis melo var. makuwa]1.2e-6866.67Show/hide
Query:  MLTKLLSKLSPHSPAVIDATCSSS----SNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ-----------------------------
        ML++LLSKLSPHSP +IDAT SSS    S+NSRSQ+DLSTALA HNTAEAHLAQVENRLKNWSIPKLEA+Q                             
Subjt:  MLTKLLSKLSPHSPAVIDATCSSS----SNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ-----------------------------

Query:  ------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGL
                                      PLFREGLDVPVYLALRDKRHL+FTPSLLGIVQSNLEQGPVYFNCRP LTVSLQD+NIM+TISLDVHSQGL
Subjt:  ------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGL

Query:  ELKDGSLPFAVSYRIYFKLMHTNLSPKA
        ELKDGSLPFAVSYRIYFKLMHTNLSPKA
Subjt:  ELKDGSLPFAVSYRIYFKLMHTNLSPKA

TrEMBL top hitse value%identityAlignment
A0A5A7SPT5 Movement protein5.9e-6966.67Show/hide
Query:  MLTKLLSKLSPHSPAVIDATCSSS----SNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ-----------------------------
        ML++LLSKLSPHSP +IDAT SSS    S+NSRSQ+DLSTALA HNTAEAHLAQVENRLKNWSIPKLEA+Q                             
Subjt:  MLTKLLSKLSPHSPAVIDATCSSS----SNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ-----------------------------

Query:  ------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGL
                                      PLFREGLDVPVYLALRDKRHL+FTPSLLGIVQSNLEQGPVYFNCRP LTVSLQD+NIM+TISLDVHSQGL
Subjt:  ------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGL

Query:  ELKDGSLPFAVSYRIYFKLMHTNLSPKA
        ELKDGSLPFAVSYRIYFKLMHTNLSPKA
Subjt:  ELKDGSLPFAVSYRIYFKLMHTNLSPKA

A0A5A7UF59 Enzymatic polyprotein6.9e-7067.25Show/hide
Query:  MLTKLLSKLSPHSPAVIDATCSSS----SNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ-----------------------------
        ML+KLLSKLSPHSP +IDAT SSS    S+NSRSQ+DLSTALA HNTAEAHLAQVENRLKNWSIPKLEA+Q                             
Subjt:  MLTKLLSKLSPHSPAVIDATCSSS----SNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ-----------------------------

Query:  ------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGL
                                      PLFREGLDVPVYLALRDKRHL+FTPSLLGIVQSNLEQGPVYFNCRP LTVSLQD+NIM+TISLDVHSQGL
Subjt:  ------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGL

Query:  ELKDGSLPFAVSYRIYFKLMHTNLSPKAL
        ELKDGSLPFAVSYRIYFKLMHTNLSPKAL
Subjt:  ELKDGSLPFAVSYRIYFKLMHTNLSPKAL

A0A5D3BEY3 Enzymatic polyprotein2.2e-6866.09Show/hide
Query:  MLTKLLSKLSPHSPAVIDATC-----SSSSNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ----------------------------
        ML+KLLSKLSPHSPA+IDAT      SSS +N RS+ DLSTALA HN+AEAHLAQVENRLKNWSIPKLEANQ                            
Subjt:  MLTKLLSKLSPHSPAVIDATC-----SSSSNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ----------------------------

Query:  -------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQG
                                       PLFREGLDVPVYLALRDKRHL+FTPSLLGIVQSNLEQGPVYFNCRP LTVSLQD+NIM+TISLDVHSQG
Subjt:  -------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQG

Query:  LELKDGSLPFAVSYRIYFKLMHTNLSPKAL
        LELKDGSLPFAVSYRIYFKLMHTNLSPKAL
Subjt:  LELKDGSLPFAVSYRIYFKLMHTNLSPKAL

A0A5D3BG41 Enzymatic polyprotein6.9e-7067.25Show/hide
Query:  MLTKLLSKLSPHSPAVIDATCSSS----SNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ-----------------------------
        ML+KLLSKLSPHSP +IDAT SSS    S+NSRSQ+DLSTALA HNTAEAHLAQVENRLKNWSIPKLEA+Q                             
Subjt:  MLTKLLSKLSPHSPAVIDATCSSS----SNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ-----------------------------

Query:  ------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGL
                                      PLFREGLDVPVYLALRDKRHL+FTPSLLGIVQSNLEQGPVYFNCRP LTVSLQD+NIM+TISLDVHSQGL
Subjt:  ------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGL

Query:  ELKDGSLPFAVSYRIYFKLMHTNLSPKAL
        ELKDGSLPFAVSYRIYFKLMHTNLSPKAL
Subjt:  ELKDGSLPFAVSYRIYFKLMHTNLSPKAL

A0A5D3DXV6 Movement protein5.9e-6966.67Show/hide
Query:  MLTKLLSKLSPHSPAVIDATCSSS----SNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ-----------------------------
        ML++LLSKLSPHSP +IDAT SSS    S+NSRSQ+DLSTALA HNTAEAHLAQVENRLKNWSIPKLEA+Q                             
Subjt:  MLTKLLSKLSPHSPAVIDATCSSS----SNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQ-----------------------------

Query:  ------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGL
                                      PLFREGLDVPVYLALRDKRHL+FTPSLLGIVQSNLEQGPVYFNCRP LTVSLQD+NIM+TISLDVHSQGL
Subjt:  ------------------------------PLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGL

Query:  ELKDGSLPFAVSYRIYFKLMHTNLSPKA
        ELKDGSLPFAVSYRIYFKLMHTNLSPKA
Subjt:  ELKDGSLPFAVSYRIYFKLMHTNLSPKA

SwissProt top hitse value%identityAlignment
P05396 Movement protein6.8e-0630.85Show/hide
Query:  FREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGLEL-KDGSLPFAVSYRIYFKLMHTNLS
        FREG++ P+ +AL D R      S+LG    NL  G   F   P  T S+ DQ +  T++   H +  +L + G   F+++Y + + L +++ S
Subjt:  FREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGLEL-KDGSLPFAVSYRIYFKLMHTNLS

P09520 Movement protein1.8e-0635.11Show/hide
Query:  FREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGLEL-KDGSLPFAVSYRIYFKLMHTNLS
        FR+G+D  V +AL D R +    SLLG  + NL  G   F   P   +SLQ +N+  T+S     +  +L K G   F V+Y I + L +++ S
Subjt:  FREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGLEL-KDGSLPFAVSYRIYFKLMHTNLS

Q02968 Movement protein1.3e-0430.53Show/hide
Query:  FREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISL--DVHSQGLELKDGSLPFAVSYRIYFKLMHTNLS
        FR G+D P+ +AL D R       LLG  + NL  G   F   P   +SL  Q +  T+SL  D  ++ L +  G     ++Y + + L +++ S
Subjt:  FREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISL--DVHSQGLELKDGSLPFAVSYRIYFKLMHTNLS

Q6XKE6 Genome polyprotein4.0e-0630.68Show/hide
Query:  REGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGLELKDGSLPFAVSYRIYFKLMH
        R+G  V   LAL D R+L++  + LG  +  L  G V+    P+ T+SL D N+   + + V  QG  L   S+   + Y+I +++ +
Subjt:  REGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGLELKDGSLPFAVSYRIYFKLMH

Q91DM0 Genome polyprotein4.0e-0630.68Show/hide
Query:  REGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGLELKDGSLPFAVSYRIYFKLMH
        R+G  V   LAL D R+L++  + LG  +  L  G V+    P+ T+SL D N+   + + V  QG  L   S+   + Y+I +++ +
Subjt:  REGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFNCRPSLTVSLQDQNIMNTISLDVHSQGLELKDGSLPFAVSYRIYFKLMH

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTACCAAATTACTCTCTAAGCTCTCCCCTCACTCCCCCGCGGTCATTGATGCTACATGTTCCTCTTCATCAAATAATTCGAGATCCCAAGAAGATCTTTCAACGGC
TCTTGCCAATCATAATACAGCCGAAGCCCATCTAGCTCAGGTTGAAAATCGACTAAAAAATTGGTCTATACCAAAATTAGAGGCCAATCAGCCTCTCTTTAGAGAAGGAT
TAGACGTTCCTGTCTACCTTGCTCTAAGAGATAAAAGGCATCTCAAATTTACTCCCTCTCTCCTAGGGATCGTCCAATCAAATCTGGAGCAAGGACCAGTATATTTCAAT
TGCAGGCCCAGCCTCACGGTCTCTCTTCAAGATCAAAACATCATGAATACTATAAGTCTTGATGTTCACTCTCAAGGACTTGAACTAAAGGATGGTTCATTACCTTTTGC
AGTCTCCTATCGCATCTACTTCAAACTGATGCATACTAATCTCTCCCCAAAAGCACTGGCTGGTCTTACTACGGCTTCCCGCTTGGCTGCCAAAGGAGCGCCCATAGGCC
CTGCTACAAAAATCGAAATAAATTTCTCAAGAATTCTCCTGGAAATAATCCCATTCAGAGTTATTCCTTTATGCCGACTGCGCTGCCTGAGGTTGGTGAGTCCTCTCCAG
AAGTGTATCTTCTTCATCATGGAGTCTTCTCTTACAAATGTTCTTTTTGAAGATGGTCGAGATCAGCAAACTGGTAAAAGCAAGGATAAGGTCGGAATACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTACCAAATTACTCTCTAAGCTCTCCCCTCACTCCCCCGCGGTCATTGATGCTACATGTTCCTCTTCATCAAATAATTCGAGATCCCAAGAAGATCTTTCAACGGC
TCTTGCCAATCATAATACAGCCGAAGCCCATCTAGCTCAGGTTGAAAATCGACTAAAAAATTGGTCTATACCAAAATTAGAGGCCAATCAGCCTCTCTTTAGAGAAGGAT
TAGACGTTCCTGTCTACCTTGCTCTAAGAGATAAAAGGCATCTCAAATTTACTCCCTCTCTCCTAGGGATCGTCCAATCAAATCTGGAGCAAGGACCAGTATATTTCAAT
TGCAGGCCCAGCCTCACGGTCTCTCTTCAAGATCAAAACATCATGAATACTATAAGTCTTGATGTTCACTCTCAAGGACTTGAACTAAAGGATGGTTCATTACCTTTTGC
AGTCTCCTATCGCATCTACTTCAAACTGATGCATACTAATCTCTCCCCAAAAGCACTGGCTGGTCTTACTACGGCTTCCCGCTTGGCTGCCAAAGGAGCGCCCATAGGCC
CTGCTACAAAAATCGAAATAAATTTCTCAAGAATTCTCCTGGAAATAATCCCATTCAGAGTTATTCCTTTATGCCGACTGCGCTGCCTGAGGTTGGTGAGTCCTCTCCAG
AAGTGTATCTTCTTCATCATGGAGTCTTCTCTTACAAATGTTCTTTTTGAAGATGGTCGAGATCAGCAAACTGGTAAAAGCAAGGATAAGGTCGGAATACAATGA
Protein sequenceShow/hide protein sequence
MLTKLLSKLSPHSPAVIDATCSSSSNNSRSQEDLSTALANHNTAEAHLAQVENRLKNWSIPKLEANQPLFREGLDVPVYLALRDKRHLKFTPSLLGIVQSNLEQGPVYFN
CRPSLTVSLQDQNIMNTISLDVHSQGLELKDGSLPFAVSYRIYFKLMHTNLSPKALAGLTTASRLAAKGAPIGPATKIEINFSRILLEIIPFRVIPLCRLRCLRLVSPLQ
KCIFFIMESSLTNVLFEDGRDQQTGKSKDKVGIQ