; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G03690 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G03690
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRetrotransposable element Tf2
Genome locationClcChr10:3964915..3966175
RNA-Seq ExpressionClc10G03690
SyntenyClc10G03690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032923.1 polyprotein [Cucumis melo var. makuwa]7.3e-20686.16Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTT N RAASP ASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTT+
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEPEFDGPSV EVC QIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        YRDYTKAWYIVFWL AYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVE+QRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        + LSKS                           +  DMTRQEDE FLLTKNAVM+TLA ASTQQEFNSVVNNVVVNLSDDND+LPEDASPASVN+VDDLD
Subjt:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGIDINDPFLDMQPY
        YDP+ G+DINDPFLD QPY
Subjt:  YDPFEGIDINDPFLDMQPY

KAA0056777.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]4.9e-21087.59Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTTPNKRAASPAASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEPEFDGPSV EVC QIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        + LSKS +                         +  DMTRQEDE FLLTKNAVM+TLA ASTQQEFNSVVNNVVVNLSDDND+LPED SPASVNNVDD D
Subjt:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGIDINDPFLDMQPY
        YDP+EG+DINDPFLD QPY
Subjt:  YDPFEGIDINDPFLDMQPY

KAA0063832.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.4e-20987.35Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTTPNKRAASPAASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEPEFDGPSV EVC QIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        + LSKS +                         +  DMTRQEDE FLLTKNAVM+TLA ASTQQEFNSVVNNVVVNLSDDND+LPED SPASVNN DD D
Subjt:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGIDINDPFLDMQPY
        YDP+EG+DINDPFLD QPY
Subjt:  YDPFEGIDINDPFLDMQPY

KAA0068172.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]4.9e-21087.59Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTTPNKRAASPAASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEP+FDGPSV EVC QIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        + LSKS +                         +  DMTRQEDE FLLTKNAVM+TLA ASTQQEFNSVVNNVVVNLSDDND+LPED SPASVNNVDDLD
Subjt:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGIDINDPFLDMQPY
        YDP+EG+DINDPFLD QPY
Subjt:  YDPFEGIDINDPFLDMQPY

TYK28077.1 polyprotein [Cucumis melo var. makuwa]3.9e-20786.63Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTT N RAASP ASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEPEFDGPSV EVC QIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        YRDYTKAWYIVFWL AYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVE+QRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        + LSKS                           +  DMTRQEDE FLLTKNAVM+TLA ASTQQEFNSVVNNVVVNLSDDND+LPEDASPASVN+VDDLD
Subjt:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGIDINDPFLDMQPY
        YDP+EG+DINDPFLD QPY
Subjt:  YDPFEGIDINDPFLDMQPY

TrEMBL top hitse value%identityAlignment
A0A5A7SR64 Polyprotein3.6e-20686.16Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTT N RAASP ASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTT+
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEPEFDGPSV EVC QIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        YRDYTKAWYIVFWL AYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVE+QRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        + LSKS                           +  DMTRQEDE FLLTKNAVM+TLA ASTQQEFNSVVNNVVVNLSDDND+LPEDASPASVN+VDDLD
Subjt:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGIDINDPFLDMQPY
        YDP+ G+DINDPFLD QPY
Subjt:  YDPFEGIDINDPFLDMQPY

A0A5A7UVN1 Retrotransposable element Tf22.4e-21087.59Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTTPNKRAASPAASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEPEFDGPSV EVC QIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        + LSKS +                         +  DMTRQEDE FLLTKNAVM+TLA ASTQQEFNSVVNNVVVNLSDDND+LPED SPASVNNVDD D
Subjt:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGIDINDPFLDMQPY
        YDP+EG+DINDPFLD QPY
Subjt:  YDPFEGIDINDPFLDMQPY

A0A5A7V6D1 Retrotransposable element Tf26.9e-21087.35Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTTPNKRAASPAASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEPEFDGPSV EVC QIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        + LSKS +                         +  DMTRQEDE FLLTKNAVM+TLA ASTQQEFNSVVNNVVVNLSDDND+LPED SPASVNN DD D
Subjt:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGIDINDPFLDMQPY
        YDP+EG+DINDPFLD QPY
Subjt:  YDPFEGIDINDPFLDMQPY

A0A5A7VIK9 Retrotransposable element Tf22.4e-21087.59Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTTPNKRAASPAASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEP+FDGPSV EVC QIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        + LSKS +                         +  DMTRQEDE FLLTKNAVM+TLA ASTQQEFNSVVNNVVVNLSDDND+LPED SPASVNNVDDLD
Subjt:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGIDINDPFLDMQPY
        YDP+EG+DINDPFLD QPY
Subjt:  YDPFEGIDINDPFLDMQPY

A0A5D3DW87 Polyprotein1.9e-20786.63Show/hide
Query:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM
        MSAENY+MD+QFEQVSRRRQGSAQRTLTIQSD SSLPPIPS  LLRPSGPTT N RAASP ASSS+S IPRNPSSYSQIVRPK+FQPRPPINGYFTKTTM
Subjt:  MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTM

Query:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN
        VDLTIEPEFDGPSV EVC QIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW+QGMFVGRKFSHPFKPPSYN
Subjt:  VDLTIEPEFDGPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYN

Query:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
        YRDYTKAWYIVFWL AYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVE+QRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF
Subjt:  YRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNF

Query:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD
        + LSKS                           +  DMTRQEDE FLLTKNAVM+TLA ASTQQEFNSVVNNVVVNLSDDND+LPEDASPASVN+VDDLD
Subjt:  QTLSKSPQ-------------------------NQMDMTRQEDETFLLTKNAVMTTLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLD

Query:  YDPFEGIDINDPFLDMQPY
        YDP+EG+DINDPFLD QPY
Subjt:  YDPFEGIDINDPFLDMQPY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCAGAAAACTACTCCATGGATATACAATTTGAACAGGTATCCAGGAGACGTCAAGGTTCTGCTCAAAGAACCCTAACTATTCAATCAGACCATTCGAGTCTTCC
TCCAATTCCTTCAAACACCTTGTTACGACCTTCCGGGCCAACAACCCCAAATAAGCGTGCCGCTTCCCCAGCCGCTTCTTCCTCAAAGTCTGTAATTCCGAGGAATCCTT
CCTCGTATTCTCAAATAGTCAGGCCAAAGGTATTCCAACCTAGACCTCCAATTAATGGTTATTTCACCAAAACCACAATGGTTGATTTAACCATAGAACCAGAATTCGAT
GGACCCTCCGTTCACGAAGTTTGCGATCAAATATTTCCTCACGGGTTTAACTTCTTACCTGAGGATCTTTCAAAAACCAGAACCTTCTACGAGTATATTTTAGTTGATTC
AAAATCAGCTGAAATTACTCACGTCCCAGATAAAAATGATCCCTCTAAGATCATTTATTCTAAGTTGAGAATATTTCGTGTCCTCACTCCATCCTACTGGAGACAAGGGA
TGTTTGTAGGAAGAAAATTCTCTCACCCTTTCAAACCACCATCATACAATTACCGTGACTACACAAAAGCATGGTATATTGTATTTTGGCTTCAAGCATACAACCACTCT
TGGTTTGTAACATTTTGTAAACAAGCTTACAAAATGCACTTTCCAAACTGGTTTCAAAATTGGTGGATGTACTTTGGACTCTCCGAAGAAATATTTCCGGTAGAAGTTCA
ACGATCATATCACCTTTTTCAACAAAGTATCTATTCGTCACCTCTTTCAAAGACGTTTAGATTTGCTTTGTATTTCCAAATTCCCTGGATCTTTTGCTGGAATTTCCAGC
TAGGACCTTCAGGAAACTTCCAAACTCTGAGTAAATCCCCTCAGAATCAAATGGATATGACTAGGCAAGAGGACGAAACCTTTCTCCTCACTAAAAACGCAGTCATGACC
ACCCTTGCCAGAGCAAGCACTCAACAGGAATTCAATTCTGTTGTCAATAATGTCGTTGTAAACCTTTCGGACGATAACGACGAATTACCGGAGGACGCTTCCCCAGCCTC
CGTTAATAACGTCGATGACCTAGATTATGATCCGTTCGAGGGCATCGACATCAACGACCCATTTTTAGACATGCAACCATATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGCAGAAAACTACTCCATGGATATACAATTTGAACAGGTATCCAGGAGACGTCAAGGTTCTGCTCAAAGAACCCTAACTATTCAATCAGACCATTCGAGTCTTCC
TCCAATTCCTTCAAACACCTTGTTACGACCTTCCGGGCCAACAACCCCAAATAAGCGTGCCGCTTCCCCAGCCGCTTCTTCCTCAAAGTCTGTAATTCCGAGGAATCCTT
CCTCGTATTCTCAAATAGTCAGGCCAAAGGTATTCCAACCTAGACCTCCAATTAATGGTTATTTCACCAAAACCACAATGGTTGATTTAACCATAGAACCAGAATTCGAT
GGACCCTCCGTTCACGAAGTTTGCGATCAAATATTTCCTCACGGGTTTAACTTCTTACCTGAGGATCTTTCAAAAACCAGAACCTTCTACGAGTATATTTTAGTTGATTC
AAAATCAGCTGAAATTACTCACGTCCCAGATAAAAATGATCCCTCTAAGATCATTTATTCTAAGTTGAGAATATTTCGTGTCCTCACTCCATCCTACTGGAGACAAGGGA
TGTTTGTAGGAAGAAAATTCTCTCACCCTTTCAAACCACCATCATACAATTACCGTGACTACACAAAAGCATGGTATATTGTATTTTGGCTTCAAGCATACAACCACTCT
TGGTTTGTAACATTTTGTAAACAAGCTTACAAAATGCACTTTCCAAACTGGTTTCAAAATTGGTGGATGTACTTTGGACTCTCCGAAGAAATATTTCCGGTAGAAGTTCA
ACGATCATATCACCTTTTTCAACAAAGTATCTATTCGTCACCTCTTTCAAAGACGTTTAGATTTGCTTTGTATTTCCAAATTCCCTGGATCTTTTGCTGGAATTTCCAGC
TAGGACCTTCAGGAAACTTCCAAACTCTGAGTAAATCCCCTCAGAATCAAATGGATATGACTAGGCAAGAGGACGAAACCTTTCTCCTCACTAAAAACGCAGTCATGACC
ACCCTTGCCAGAGCAAGCACTCAACAGGAATTCAATTCTGTTGTCAATAATGTCGTTGTAAACCTTTCGGACGATAACGACGAATTACCGGAGGACGCTTCCCCAGCCTC
CGTTAATAACGTCGATGACCTAGATTATGATCCGTTCGAGGGCATCGACATCAACGACCCATTTTTAGACATGCAACCATATTAG
Protein sequenceShow/hide protein sequence
MSAENYSMDIQFEQVSRRRQGSAQRTLTIQSDHSSLPPIPSNTLLRPSGPTTPNKRAASPAASSSKSVIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTMVDLTIEPEFD
GPSVHEVCDQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWRQGMFVGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHS
WFVTFCKQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNFQTLSKSPQNQMDMTRQEDETFLLTKNAVMT
TLARASTQQEFNSVVNNVVVNLSDDNDELPEDASPASVNNVDDLDYDPFEGIDINDPFLDMQPY