; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G03890 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G03890
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr10:4224403..4232861
RNA-Seq ExpressionClc10G03890
SyntenyClc10G03890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN55981.2 hypothetical protein Csa_023720, partial [Cucumis sativus]3.3e-1341.04Show/hide
Query:  RSSSKGKNSDNSKDLFYRPWFRAHSIPRTRRLAS-------------------------------------------------------------DFPLW
        + +++ K   NSKDLFYRPWFR HSIPRTRRLAS                                                             DFPLW
Subjt:  RSSSKGKNSDNSKDLFYRPWFRAHSIPRTRRLAS-------------------------------------------------------------DFPLW

Query:  QSKKLQEISFLGLCALVSVKRYIHQAPVFPLTLE
        QS KLQEISFLGL AL+SVK YIH  PVFP  LE
Subjt:  QSKKLQEISFLGLCALVSVKRYIHQAPVFPLTLE
TrEMBL top hitse value%identityAlignment
A0A0A0L4K3 Uncharacterized protein1.6e-1341.04Show/hide
Query:  RSSSKGKNSDNSKDLFYRPWFRAHSIPRTRRLAS-------------------------------------------------------------DFPLW
        + +++ K   NSKDLFYRPWFR HSIPRTRRLAS                                                             DFPLW
Subjt:  RSSSKGKNSDNSKDLFYRPWFRAHSIPRTRRLAS-------------------------------------------------------------DFPLW

Query:  QSKKLQEISFLGLCALVSVKRYIHQAPVFPLTLE
        QS KLQEISFLGL AL+SVK YIH  PVFP  LE
Subjt:  QSKKLQEISFLGLCALVSVKRYIHQAPVFPLTLE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAATATGGCCACTCCATTTAATCTTTCTTGCGACATAGTTGACCGTAATTTGCAGAAAGTTTCTTCAAGTGTCAGAATCGTAATAAGGAGTAGCAGCAAG
GGTAAAAATTCTGACAACTCGAAAGACCTCTTTTATCGGCCCTGGTTTCGGGCTCATTCAATTCCTCGAACTCGGCGTTTAGCTTCTGACTTCCCCCTTTGGCAG
AGCAAGAAACTTCAAGAAATTTCGTTTCTGGGGTTGTGTGCTTTGGTTTCTGTGAAGCGTTACATTCATCAAGCTCCTGTTTTTCCCCTTACTTTGGAGTATGTT
ATCACTCTTTACTGTATTTGGATTTCTGGGTTGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAATATGGCCACTCCATTTAATCTTTCTTGCGACATAGTTGACCGTAATTTGCAGAAAGTTTCTTCAAGTGTCAGAATCGTAATAAGGAGTAGCAGCAAG
GGTAAAAATTCTGACAACTCGAAAGACCTCTTTTATCGGCCCTGGTTTCGGGCTCATTCAATTCCTCGAACTCGGCGTTTAGCTTCTGACTTCCCCCTTTGGCAG
AGCAAGAAACTTCAAGAAATTTCGTTTCTGGGGTTGTGTGCTTTGGTTTCTGTGAAGCGTTACATTCATCAAGCTCCTGTTTTTCCCCTTACTTTGGAGTATGTT
ATCACTCTTTACTGTATTTGGATTTCTGGGTTGGAATGA
Protein sequenceShow/hide protein sequence
MDNMATPFNLSCDIVDRNLQKVSSSVRIVIRSSSKGKNSDNSKDLFYRPWFRAHSIPRTRRLASDFPLWQSKKLQEISFLGLCALVSVKRYIHQAPVFPLTLEYV
ITLYCIWISGLE