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Clc10G04030 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G04030
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionC2H2-type domain-containing protein
Genome locationClcChr10:4410780..4413041
RNA-Seq ExpressionClc10G04030
SyntenyClc10G04030
Gene Ontology termsGO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0008236 - serine-type peptidase activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044653 - C2H2-type zinc-finger protein AZF1/2/3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN55980.1 hypothetical protein Csa_011357 [Cucumis sativus]6.2e-4754.37Show/hide
Query:  MDHEGNGLRIKIKVRNGS------NDDGKKQFCSIGHMRIHSETTMEKGLLFQPSTP--AAATRRSSPSSSFSSSSSAVVDCSISLPSWSLTGRRGRKST
        MDH GN LRIKIK+R+ +      ++D K QF S       +ET MEKGLLFQPSTP  AAATRR+SPS  F      VVDCS  L SW LTGRRGRKST
Subjt:  MDHEGNGLRIKIKVRNGS------NDDGKKQFCSIGHMRIHSETTMEKGLLFQPSTP--AAATRRSSPSSSFSSSSSAVVDCSISLPSWSLTGRRGRKST

Query:  STTAAAAATTTVLISDVLP----GAKRMKIETHSDNEKLPK-KKAHSEENKNE-VMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTANT
         +  ++  TT  ++ +V+P      KR+K ETHSD E+     K H +ENKN   +EKEYKCN+C KVF++P+A GGHKS H KANKTD A   K TA+ 
Subjt:  STTAAAAATTTVLISDVLP----GAKRMKIETHSDNEKLPK-KKAHSEENKNE-VMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTANT

Query:  TVGTTFEP---LSL-DSSTDQTAGPKRVMDFDLNQLPTVDKEAILESCILHL
        T+GT+FEP   +S+ DSSTD T   + V+DFDLN+LP   +EA LESC LHL
Subjt:  TVGTTFEP---LSL-DSSTDQTAGPKRVMDFDLNQLPTVDKEAILESCILHL

KGN56002.2 hypothetical protein Csa_011010 [Cucumis sativus]1.7e-2362.93Show/hide
Query:  KRMKIETHSDNEKLPKKKAHSEENKNEVMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTANTTVGTTFEP----LSLDSSTDQTAGPKR
        KR+KIETHSD+E+L KKK HS E KN  +EKEYKC++CSKVF++ RA GGHKSSHYK  KT+ A   K T      TT EP    +SLDSSTDQT   KR
Subjt:  KRMKIETHSDNEKLPKKKAHSEENKNEVMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTANTTVGTTFEP----LSLDSSTDQTAGPKR

Query:  VMDFDLN-QLPTVDKE
        VMDFDLN QLP  D+E
Subjt:  VMDFDLN-QLPTVDKE

TYK19398.1 TPRXL protein [Cucumis melo var. makuwa]1.7e-5255.51Show/hide
Query:  MDHEGNGLRIKIKVRNG----------SNDDGKKQFCSIGHMRIHSETTMEKGLLFQPSTP--AAATRRSSPSSSFSSSSSAVVDCSISLPSWSLTGRRG
        MDH GN LRIKIK+RN           +++D KKQFCSI HM   SET M+KGLLFQ STP   AATR SSPS    S +  +VDCS  L SW LTGRRG
Subjt:  MDHEGNGLRIKIKVRNG----------SNDDGKKQFCSIGHMRIHSETTMEKGLLFQPSTP--AAATRRSSPSSSFSSSSSAVVDCSISLPSWSLTGRRG

Query:  RKSTSTTAAAAATTTVLISDVLP----GAKRMKIETHSDNEKLPKKKAHSEENKNEVMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTA
        RKS S+   ++ TTT  + DV+       KR+K ETHSD+EK  + K   E   N V+EK+YKCN+CSKVF+SP+A GGHKS HYKANKT  A   K  A
Subjt:  RKSTSTTAAAAATTTVLISDVLP----GAKRMKIETHSDNEKLPKKKAHSEENKNEVMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTA

Query:  NTTVGTTFEP----LSLDSSTDQTAGPKRVMDFDLNQLPTVDKEAILESCILHL
        N T+GTT EP     ++ SSTD+T     +MDFDLN+LP   KEAILESC LHL
Subjt:  NTTVGTTFEP----LSLDSSTDQTAGPKRVMDFDLNQLPTVDKEAILESCILHL

XP_011652725.1 putative protein TPRXL [Cucumis sativus]1.9e-4052.8Show/hide
Query:  RIKIKVRNGSN---DDGKKQFCSIG-HMRIHSETTMEKGLLFQPSTPAAATRRSSPSS--SFSSSSSAVVDCSISLP-SWSLTGRRGRKSTSTTAAAAAT
        +IK + RN  +   +D  KQ CSIG HMR   ETTMEKGL  QP T A  T  SS SS  S ++S++ VVDC  SLP SWSLTGRRGRK TS++  ++ T
Subjt:  RIKIKVRNGSN---DDGKKQFCSIG-HMRIHSETTMEKGLLFQPSTPAAATRRSSPSS--SFSSSSSAVVDCSISLP-SWSLTGRRGRKSTSTTAAAAAT

Query:  TT--VLISDV--------------------LPGAKRMKIETHSDNEKLPKKKAHSEENKNEVMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATT
        TT  V+ SD                         KR+KIETHSD+E+L KKK HS E KN  +EKEYKC++CSKVF++ RA GGHKSSHYK  KT+ A  
Subjt:  TT--VLISDV--------------------LPGAKRMKIETHSDNEKLPKKKAHSEENKNEVMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATT

Query:  NKTTANTTVGTTFEP----LSLDSSTDQTAGPKRVMDFDLN-QLPTVDKE
         K T      TT EP    +SLDSSTDQT   KRVMDFDLN QLP  D+E
Subjt:  NKTTANTTVGTTFEP----LSLDSSTDQTAGPKRVMDFDLN-QLPTVDKE

XP_022143488.1 zinc finger protein ZAT3-like [Momordica charantia]3.2e-1131.28Show/hide
Query:  DHEGNGLRIKIKVRNGSNDDG------KKQFCSIGHMRIHSETTMEKGLLFQPSTPAAATRRSSPSSSFSSSSSAVVDCSISLPSWSLTGRRGRKSTSTT
        D   NG+ I++K+   S+  G      +      GHMR H + T                R   P+ S SSSS+A    S  LP+WS+TGRRGRK TS+ 
Subjt:  DHEGNGLRIKIKVRNGSNDDG------KKQFCSIGHMRIHSETTMEKGLLFQPSTPAAATRRSSPSSSFSSSSSAVVDCSISLPSWSLTGRRGRKSTSTT

Query:  AAAAATTTVLISDVLPGAKRMKIETHSDNEKLPKKKAHSEENKNEVMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTANTTVGTTFEPL
        AA+ +                   ++ +++   KKK H            Y+CN+C K F SP+A GGHKSSHYK  KTD      ++            
Subjt:  AAAAATTTVLISDVLPGAKRMKIETHSDNEKLPKKKAHSEENKNEVMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTANTTVGTTFEPL

Query:  SLDSSTDQTAGPKRVMDFDLNQLPTVD
                    +R +DFDLN+LP +D
Subjt:  SLDSSTDQTAGPKRVMDFDLNQLPTVD

TrEMBL top hitse value%identityAlignment
A0A0A0L1Z9 C2H2-type domain-containing protein3.0e-4754.37Show/hide
Query:  MDHEGNGLRIKIKVRNGS------NDDGKKQFCSIGHMRIHSETTMEKGLLFQPSTP--AAATRRSSPSSSFSSSSSAVVDCSISLPSWSLTGRRGRKST
        MDH GN LRIKIK+R+ +      ++D K QF S       +ET MEKGLLFQPSTP  AAATRR+SPS  F      VVDCS  L SW LTGRRGRKST
Subjt:  MDHEGNGLRIKIKVRNGS------NDDGKKQFCSIGHMRIHSETTMEKGLLFQPSTP--AAATRRSSPSSSFSSSSSAVVDCSISLPSWSLTGRRGRKST

Query:  STTAAAAATTTVLISDVLP----GAKRMKIETHSDNEKLPK-KKAHSEENKNE-VMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTANT
         +  ++  TT  ++ +V+P      KR+K ETHSD E+     K H +ENKN   +EKEYKCN+C KVF++P+A GGHKS H KANKTD A   K TA+ 
Subjt:  STTAAAAATTTVLISDVLP----GAKRMKIETHSDNEKLPK-KKAHSEENKNE-VMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTANT

Query:  TVGTTFEP---LSL-DSSTDQTAGPKRVMDFDLNQLPTVDKEAILESCILHL
        T+GT+FEP   +S+ DSSTD T   + V+DFDLN+LP   +EA LESC LHL
Subjt:  TVGTTFEP---LSL-DSSTDQTAGPKRVMDFDLNQLPTVDKEAILESCILHL

A0A0A0L4M3 C2H2-type domain-containing protein4.2e-4152.59Show/hide
Query:  LRIKIKVRNGSN---DDGKKQFCSIG-HMRIHSETTMEKGLLFQPSTPAAATRRSSPSS--SFSSSSSAVVDCSISLP-SWSLTGRRGRKSTSTTAAAAA
        ++IK + RN  +   +D  KQ CSIG HMR   ETTMEKGL  QP T A  T  SS SS  S ++S++ VVDC  SLP SWSLTGRRGRK TS++  ++ 
Subjt:  LRIKIKVRNGSN---DDGKKQFCSIG-HMRIHSETTMEKGLLFQPSTPAAATRRSSPSS--SFSSSSSAVVDCSISLP-SWSLTGRRGRKSTSTTAAAAA

Query:  TTT--VLISDV--------------------LPGAKRMKIETHSDNEKLPKKKAHSEENKNEVMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTAT
        TTT  V+ SD                         KR+KIETHSD+E+L KKK HS E KN  +EKEYKC++CSKVF++ RA GGHKSSHYK  KT+ A 
Subjt:  TTT--VLISDV--------------------LPGAKRMKIETHSDNEKLPKKKAHSEENKNEVMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTAT

Query:  TNKTTANTTVGTTFEP----LSLDSSTDQTAGPKRVMDFDLN-QLPTVDKE
          K T      TT EP    +SLDSSTDQT   KRVMDFDLN QLP  D+E
Subjt:  TNKTTANTTVGTTFEP----LSLDSSTDQTAGPKRVMDFDLN-QLPTVDKE

A0A1S3BLH2 LOW QUALITY PROTEIN: uncharacterized protein LOC1034911338.9e-0733.16Show/hide
Query:  GHMRIHSETTMEKGLLFQPSTPAAATRRSSPSSSFSSSSSAVVDCSISLPSWSLTGRRGRKSTSTTAAAAATTTVLISDVLPGAKRMKIETHSDNEKLPK
        GHMR H + +  KG+  QP    A       SSS SSSSS        LPSWSLT +RG K  S   AA ++++   S     AK   + ++ D  +  +
Subjt:  GHMRIHSETTMEKGLLFQPSTPAAATRRSSPSSSFSSSSSAVVDCSISLPSWSLTGRRGRKSTSTTAAAAATTTVLISDVLPGAKRMKIETHSDNEKLPK

Query:  KKAHSEENKNEV-MEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTANTTVGTTFEPLSLDSSTDQTAGPKRVMDFDLNQLPTVDKE
        +K    +  NE+ ++K YKCN C K + S +A GGHKS H K+      ++N TT                   +T   +++++FDLN+LPT++ +
Subjt:  KKAHSEENKNEV-MEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTANTTVGTTFEPLSLDSSTDQTAGPKRVMDFDLNQLPTVDKE

A0A5D3D748 TPRXL protein8.2e-5355.51Show/hide
Query:  MDHEGNGLRIKIKVRNG----------SNDDGKKQFCSIGHMRIHSETTMEKGLLFQPSTP--AAATRRSSPSSSFSSSSSAVVDCSISLPSWSLTGRRG
        MDH GN LRIKIK+RN           +++D KKQFCSI HM   SET M+KGLLFQ STP   AATR SSPS    S +  +VDCS  L SW LTGRRG
Subjt:  MDHEGNGLRIKIKVRNG----------SNDDGKKQFCSIGHMRIHSETTMEKGLLFQPSTP--AAATRRSSPSSSFSSSSSAVVDCSISLPSWSLTGRRG

Query:  RKSTSTTAAAAATTTVLISDVLP----GAKRMKIETHSDNEKLPKKKAHSEENKNEVMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTA
        RKS S+   ++ TTT  + DV+       KR+K ETHSD+EK  + K   E   N V+EK+YKCN+CSKVF+SP+A GGHKS HYKANKT  A   K  A
Subjt:  RKSTSTTAAAAATTTVLISDVLP----GAKRMKIETHSDNEKLPKKKAHSEENKNEVMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTA

Query:  NTTVGTTFEP----LSLDSSTDQTAGPKRVMDFDLNQLPTVDKEAILESCILHL
        N T+GTT EP     ++ SSTD+T     +MDFDLN+LP   KEAILESC LHL
Subjt:  NTTVGTTFEP----LSLDSSTDQTAGPKRVMDFDLNQLPTVDKEAILESCILHL

A0A6J1CQU4 zinc finger protein ZAT3-like1.6e-1131.28Show/hide
Query:  DHEGNGLRIKIKVRNGSNDDG------KKQFCSIGHMRIHSETTMEKGLLFQPSTPAAATRRSSPSSSFSSSSSAVVDCSISLPSWSLTGRRGRKSTSTT
        D   NG+ I++K+   S+  G      +      GHMR H + T                R   P+ S SSSS+A    S  LP+WS+TGRRGRK TS+ 
Subjt:  DHEGNGLRIKIKVRNGSNDDG------KKQFCSIGHMRIHSETTMEKGLLFQPSTPAAATRRSSPSSSFSSSSSAVVDCSISLPSWSLTGRRGRKSTSTT

Query:  AAAAATTTVLISDVLPGAKRMKIETHSDNEKLPKKKAHSEENKNEVMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTANTTVGTTFEPL
        AA+ +                   ++ +++   KKK H            Y+CN+C K F SP+A GGHKSSHYK  KTD      ++            
Subjt:  AAAAATTTVLISDVLPGAKRMKIETHSDNEKLPKKKAHSEENKNEVMEKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTANTTVGTTFEPL

Query:  SLDSSTDQTAGPKRVMDFDLNQLPTVD
                    +R +DFDLN+LP +D
Subjt:  SLDSSTDQTAGPKRVMDFDLNQLPTVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G49930.1 C2H2 and C2HC zinc fingers superfamily protein3.1e-0446.51Show/hide
Query:  EKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTAN
        +K+YKC++C K F S +A GGHK+SH K    D   +N T  N
Subjt:  EKEYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTAN

AT5G56200.1 C2H2 type zinc finger transcription factor family2.0e-0638.27Show/hide
Query:  EYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTANTTVGTTFEPLSLDSSTDQTAGPK-RVMDFDLNQLPTVDKE
        ++ CNIC K FS+ +A GGHK  H+ A  +  A T   TA  TV  T     +  +  +    K RV++FDLN+LP  ++E
Subjt:  EYKCNICSKVFSSPRAFGGHKSSHYKANKTDTATTNKTTANTTVGTTFEPLSLDSSTDQTAGPK-RVMDFDLNQLPTVDKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCTCTCGATGAAGGTTTCTAAAGCTATGGGTATCCATGATGAATTGAATGGTATTTTGTCTATTAATGTGCAAAATATCTTAGTTGAATATGATGAGTTG
TCTAAGATGGATCACGAAGGCAACGGACTCCGGATCAAGATCAAGGTCAGAAACGGCAGCAACGATGACGGTAAGAAGCAGTTTTGTTCCATTGGCCATATGAGG
ATTCATTCTGAAACAACAATGGAGAAGGGATTATTATTCCAACCCTCAACTCCGGCCGCCGCCACCCGACGAAGCTCTCCCTCTTCCTCTTTCTCTTCCTCTTCA
TCCGCCGTCGTTGATTGCTCTATATCTCTTCCCTCATGGTCTCTCACTGGCCGGAGAGGGCGAAAGAGCACCTCCACCACTGCCGCCGCCGCCGCCACCACCACC
GTTCTTATCTCTGATGTTCTACCCGGCGCGAAGAGAATGAAGATTGAGACTCATTCGGATAACGAGAAGTTACCGAAAAAGAAAGCGCACTCCGAAGAGAATAAA
AATGAGGTTATGGAGAAAGAATACAAATGCAATATATGCAGTAAAGTATTCTCAAGTCCAAGAGCATTTGGAGGCCATAAGTCCAGCCACTACAAAGCCAATAAA
ACAGATACTGCTACTACAAACAAAACTACTGCCAATACTACCGTTGGAACAACCTTCGAACCGCTGTCGTTAGATTCGTCGACCGATCAAACCGCAGGTCCGAAG
AGGGTGATGGATTTTGATCTCAATCAGCTGCCAACCGTCGACAAAGAAGCCATTCTTGAATCTTGCATTTTGCATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCTCTCGATGAAGGTTTCTAAAGCTATGGGTATCCATGATGAATTGAATGGTATTTTGTCTATTAATGTGCAAAATATCTTAGTTGAATATGATGAGTTG
TCTAAGATGGATCACGAAGGCAACGGACTCCGGATCAAGATCAAGGTCAGAAACGGCAGCAACGATGACGGTAAGAAGCAGTTTTGTTCCATTGGCCATATGAGG
ATTCATTCTGAAACAACAATGGAGAAGGGATTATTATTCCAACCCTCAACTCCGGCCGCCGCCACCCGACGAAGCTCTCCCTCTTCCTCTTTCTCTTCCTCTTCA
TCCGCCGTCGTTGATTGCTCTATATCTCTTCCCTCATGGTCTCTCACTGGCCGGAGAGGGCGAAAGAGCACCTCCACCACTGCCGCCGCCGCCGCCACCACCACC
GTTCTTATCTCTGATGTTCTACCCGGCGCGAAGAGAATGAAGATTGAGACTCATTCGGATAACGAGAAGTTACCGAAAAAGAAAGCGCACTCCGAAGAGAATAAA
AATGAGGTTATGGAGAAAGAATACAAATGCAATATATGCAGTAAAGTATTCTCAAGTCCAAGAGCATTTGGAGGCCATAAGTCCAGCCACTACAAAGCCAATAAA
ACAGATACTGCTACTACAAACAAAACTACTGCCAATACTACCGTTGGAACAACCTTCGAACCGCTGTCGTTAGATTCGTCGACCGATCAAACCGCAGGTCCGAAG
AGGGTGATGGATTTTGATCTCAATCAGCTGCCAACCGTCGACAAAGAAGCCATTCTTGAATCTTGCATTTTGCATCTTTGA
Protein sequenceShow/hide protein sequence
MLLSMKVSKAMGIHDELNGILSINVQNILVEYDELSKMDHEGNGLRIKIKVRNGSNDDGKKQFCSIGHMRIHSETTMEKGLLFQPSTPAAATRRSSPSSSFSSSS
SAVVDCSISLPSWSLTGRRGRKSTSTTAAAAATTTVLISDVLPGAKRMKIETHSDNEKLPKKKAHSEENKNEVMEKEYKCNICSKVFSSPRAFGGHKSSHYKANK
TDTATTNKTTANTTVGTTFEPLSLDSSTDQTAGPKRVMDFDLNQLPTVDKEAILESCILHL