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Clc10G04125 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G04125
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionserine-rich protein-related
Genome locationClcChr10:4541517..4542083
RNA-Seq ExpressionClc10G04125
SyntenyClc10G04125
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577543.1 hypothetical protein SDJN03_25117, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2264.29Show/hide
Query:  IAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD
        I AEPKQ  TNC +PTSK+A  E ELDD KK A          +MT+SPS +  CLCSPTTH+GSFRCR HR  AISRGGS GSNLSDLAQKS A++D
Subjt:  IAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD

KAG7015599.1 hypothetical protein SDJN02_23235, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-2264.29Show/hide
Query:  IAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD
        I+AEPKQ  TNC +PTSK+A  E ELDD KK A          +MT+SPS +  CLCSPTTH+GSFRCR HR  AISRGGS GSNLSDLAQKS A++D
Subjt:  IAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD

KGN55991.1 hypothetical protein Csa_011649 [Cucumis sativus]5.3e-3580Show/hide
Query:  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD
        D I  +PKQTKTNCKTPTSK+A+ E+E DDLKK A++LMSPTALSRMTKS S+K NCLCSPTTHIGSFRCRRHRS +ISRGGSVGSNLSDL QKS AM+D
Subjt:  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD

TYK19387.1 putative PGPS/D10 protein [Cucumis melo var. makuwa]9.1e-3579Show/hide
Query:  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD
        D I  + KQTKTNCKTPTSK+A+ E+E DDLKK AH+LMSPTALSRMTKSPS+K NCLCSPTTHIGSFRCRRHRS A+SRG SVGSNLSDL QKS  M+D
Subjt:  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD

XP_022143490.1 uncharacterized protein LOC111013367 [Momordica charantia]2.9e-3377.23Show/hide
Query:  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAH-MLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMD
        D + AEPKQ K NCKTPT+K+A+ E +LD+LKK++H ++MSPTALSRM+KSPS K NCLCSPTTHIGSFRCRRHRS AISRGGSVGSNLSDLAQKS AM+
Subjt:  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAH-MLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMD

Query:  D
        D
Subjt:  D

TrEMBL top hitse value%identityAlignment
A0A0A0L7C7 Uncharacterized protein2.6e-3580Show/hide
Query:  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD
        D I  +PKQTKTNCKTPTSK+A+ E+E DDLKK A++LMSPTALSRMTKS S+K NCLCSPTTHIGSFRCRRHRS +ISRGGSVGSNLSDL QKS AM+D
Subjt:  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD

A0A5D3D753 Putative PGPS/D10 protein4.4e-3579Show/hide
Query:  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD
        D I  + KQTKTNCKTPTSK+A+ E+E DDLKK AH+LMSPTALSRMTKSPS+K NCLCSPTTHIGSFRCRRHRS A+SRG SVGSNLSDL QKS  M+D
Subjt:  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD

A0A5N6L3X1 Uncharacterized protein2.7e-1652.63Show/hide
Query:  EPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD
        E K  K N K    K  + E  LDD+KK  H+L+SP+      K      NCLCSPTTH+GSFRCR HR++++ RGGSVGS LS+LA KSGA+ D
Subjt:  EPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD

A0A6J1CNY2 uncharacterized protein LOC1110133671.4e-3377.23Show/hide
Query:  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAH-MLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMD
        D + AEPKQ K NCKTPT+K+A+ E +LD+LKK++H ++MSPTALSRM+KSPS K NCLCSPTTHIGSFRCRRHRS AISRGGSVGSNLSDLAQKS AM+
Subjt:  DVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAH-MLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMD

Query:  D
        D
Subjt:  D

W9SBP1 Uncharacterized protein2.7e-1654.26Show/hide
Query:  PKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD
        P++ K N      K  + +  L++LKK  H+L SP A   +TKS S + NCLCSPTTH GSFRCR HRS+ + RGGSVGSNLS+LA+K GA+ D
Subjt:  PKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein8.0e-0548.89Show/hide
Query:  LSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNL
        LSR T     K  C+CSPTTH GSF+C+ HR+ ++ R  SV +N+
Subjt:  LSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNL

AT1G67910.1 unknown protein4.3e-0660.98Show/hide
Query:  LSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSV
        LSR T     K NCLCSPTTH GSFRCR HRS ++ R  S+
Subjt:  LSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSV

AT1G67910.2 unknown protein4.3e-0660.98Show/hide
Query:  LSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSV
        LSR T     K NCLCSPTTH GSFRCR HRS ++ R  S+
Subjt:  LSRMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSV

AT3G13227.1 serine-rich protein-related2.4e-0948.24Show/hide
Query:  KTAVAESELDDLKKTAHMLMSPTALS---------RMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAA---ISRGGSVGSNLSDLA
        K   A+   DD+K+     MSP              M+KS SV+ NCLC+PTTH GSFRCR HR  A   +SRG SV SNLS LA
Subjt:  KTAVAESELDDLKKTAHMLMSPTALS---------RMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAA---ISRGGSVGSNLSDLA

AT5G55980.1 serine-rich protein-related4.9e-1055.36Show/hide
Query:  RMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSD-LAQKSGAMDD
        R +   S +LNCLCSPTTH GSFRCR HR  +++R GS+GSNL+  L+ KS    D
Subjt:  RMTKSPSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSD-LAQKSGAMDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCAAATCCCTAATCCAAACTCTTCTGTTCCAATTCTCAGAGGGAACCAGAACAGAACGCCCACCAGAGAAATCCGCCATTGAAGCTTCTCCTCTGCCG
TCTCCCCCATCTCTTCCGGCAGTCGCAAATCCAGACAACACTCCCCGGCCGCCCATCACCGATGTGATCGCAGCAGAGCCGAAACAAACGAAGACGAATTGCAAG
ACACCGACCTCGAAAACCGCGGTGGCGGAATCGGAACTCGACGATCTGAAGAAGACAGCGCATATGCTAATGTCTCCGACGGCGTTGTCGAGGATGACGAAGTCG
CCGAGCGTTAAATTGAATTGCCTCTGTTCTCCGACCACTCACATTGGATCTTTCCGGTGCCGACGCCACCGGAGCGCCGCTATCTCCCGCGGCGGTTCCGTCGGC
TCCAATCTCTCCGATCTGGCTCAGAAATCAGGGGCGATGGACGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCAAATCCCTAATCCAAACTCTTCTGTTCCAATTCTCAGAGGGAACCAGAACAGAACGCCCACCAGAGAAATCCGCCATTGAAGCTTCTCCTCTGCCG
TCTCCCCCATCTCTTCCGGCAGTCGCAAATCCAGACAACACTCCCCGGCCGCCCATCACCGATGTGATCGCAGCAGAGCCGAAACAAACGAAGACGAATTGCAAG
ACACCGACCTCGAAAACCGCGGTGGCGGAATCGGAACTCGACGATCTGAAGAAGACAGCGCATATGCTAATGTCTCCGACGGCGTTGTCGAGGATGACGAAGTCG
CCGAGCGTTAAATTGAATTGCCTCTGTTCTCCGACCACTCACATTGGATCTTTCCGGTGCCGACGCCACCGGAGCGCCGCTATCTCCCGCGGCGGTTCCGTCGGC
TCCAATCTCTCCGATCTGGCTCAGAAATCAGGGGCGATGGACGATTAA
Protein sequenceShow/hide protein sequence
MSSKSLIQTLLFQFSEGTRTERPPEKSAIEASPLPSPPSLPAVANPDNTPRPPITDVIAAEPKQTKTNCKTPTSKTAVAESELDDLKKTAHMLMSPTALSRMTKS
PSVKLNCLCSPTTHIGSFRCRRHRSAAISRGGSVGSNLSDLAQKSGAMDD