; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G04190 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G04190
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRNA-binding protein pno1
Genome locationClcChr10:4652538..4658458
RNA-Seq ExpressionClc10G04190
SyntenyClc10G04190
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR036612 - K Homology domain, type 1 superfamily
IPR039912 - Pre-rRNA-processing protein PNO1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650098.1 hypothetical protein Csa_010636 [Cucumis sativus]4.3e-19783.05Show/hide
Query:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVA
        MGFSIT+ PS+SM+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAAA+S RWFGVHMVFTVLTAIFQGSVA
Subjt:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVA

Query:  VLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNG-VMRSAKPPHSFTLHLHNLAFSSSSDNFTWYHPA
        +LVYTRTGDFL ELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFL+YYAFVE EGSNNNG  MRSAK                  D   W  P 
Subjt:  VLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNG-VMRSAKPPHSFTLHLHNLAFSSSSDNFTWYHPA

Query:  ASSVSLATSAAAAPLLHTFFYLFFVSVFGCFQLWETRHN-SIMQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYS
                              F + + G F + ET HN SIMQS EASTSM+VET+ T +K+VVST PPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYS
Subjt:  ASSVSLATSAAAAPLLHTFFYLFFVSVFGCFQLWETRHN-SIMQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYS

Query:  PLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGK
        PLKKAWM+IYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQK ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGK
Subjt:  PLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGK

Query:  AGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        AGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
Subjt:  AGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

KAG6577533.1 Gamma-tubulin complex component 2, partial [Cucurbita argyrosperma subsp. sororia]1.8e-11887.55Show/hide
Query:  SSVSLATSAAAAPLLHTFFYLFFVSVFGCFQL-WETRHNSIMQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSP
        S+ + A +AAAAP        FF  V     L  ET+HNSIMQSTE+STSMEVETV T +KNVVST PPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+P
Subjt:  SSVSLATSAAAAPLLHTFFYLFFVSVFGCFQL-WETRHNSIMQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSP

Query:  LKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKA
        LKKAWMEIYTPIY+QMKIDIRMNLK RKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKA
Subjt:  LKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKA

Query:  GKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        GKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
Subjt:  GKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

KAG7015597.1 RNA-binding protein pno1 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-11496.43Show/hide
Query:  MQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTE+STSMEVETV T +KNVVST PPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_008449001.1 PREDICTED: RNA-binding protein pno1 [Cucumis melo]4.1e-11596.88Show/hide
Query:  MQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEASTSMEVET+ T +K+VVST PPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_022932417.1 RNA-binding protein pno1 [Cucurbita moschata]7.0e-11596.88Show/hide
Query:  MQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEASTSMEVETV T +KNVVST PPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

TrEMBL top hitse value%identityAlignment
A0A0A0L7D9 KH domain-containing protein4.2e-11395.54Show/hide
Query:  MQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQS EASTSM+VET+ T +K+VVST PPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWM+IYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A1S3BLP2 RNA-binding protein pno12.0e-11596.88Show/hide
Query:  MQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEASTSMEVET+ T +K+VVST PPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1EWL7 RNA-binding protein pno13.4e-11596.88Show/hide
Query:  MQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEASTSMEVETV T +KNVVST PPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1HQ98 RNA-binding protein pno1-like3.8e-11495.98Show/hide
Query:  MQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQ TEASTSMEVETV T +KNVVST PPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAF+LGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1KXN9 RNA-binding protein pno1-like isoform X11.9e-11396.43Show/hide
Query:  MQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEASTSMEVE V T  K VVST PPKP FDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

SwissProt top hitse value%identityAlignment
A7RP64 RNA-binding protein pno19.0e-6557.01Show/hide
Query:  EVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVH
        E++TVE+ +         +P F P+K  ++  G+ + RK+ VP HRY+PLK+ WM+I+TP+ + +K+ IR NL +R VE++   +T DI  +QK ADFV 
Subjt:  EVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVH

Query:  AFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVY
        AF+LGF+V DA+AL+R+D+L++ESFEI DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+A+TKIHILGSF NIKIAR ++C+LILGSP  KVY
Subjt:  AFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVY

Query:  SKLRAVTARLAERF
          +RAV +R AERF
Subjt:  SKLRAVTARLAERF

Q29IG6 RNA-binding protein pno11.2e-6466.85Show/hide
Query:  QFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRG
        + RKVSVPPHRYS LK+ WM+I+TP+ + MK+ IR N+KAR+VEL+   +TPDI+NLQK ADFV AF+ GF+V DA+ALLR+++L+VE+FEIKDVKTLRG
Subjt:  QFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRG

Query:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        +H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LR+V +RL+ER
Subjt:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Q5F414 RNA-binding protein PNO11.7e-6360.2Show/hide
Query:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD
        +P F PL    +  G+ + RKV VP +RY+PLK+ WM+I+TPI + +++ IR NLK R VE+KT ++T D+S L K ADFV AF+LGF V DA+AL+R+D
Subjt:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        +L++ESFE+ DVK L+G+HLSRAIGR++GK GKTKF IEN T+TRIV+AD+KIHILGSF NIK+AR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q6VEU3 RNA-binding protein PNO17.7e-6456.16Show/hide
Query:  ASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKC
        A+  M+ +T E+ S   V     +P F  L   ++  G  + RKV VP HRY+PLK+ W++I+TPI + +++ +R NLK R+VE+KT  +T DI  L + 
Subjt:  ASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKC

Query:  ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSP
        ADFV AF+LGF V DA+AL+R+DEL++E+F++ DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+ADTKIHILGSF NIK+AR ++C+LILGSP
Subjt:  ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSP

Query:  AGKVYSKLRAVTARLAERF
          KVY  LRAV  R AERF
Subjt:  AGKVYSKLRAVTARLAERF

Q9VR89 RNA-binding protein pno18.2e-6665.24Show/hide
Query:  PHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFE
        P +    R + RKVSVPPHRYS LK+ WM+I+TP+ + MK+ IR N+KAR+VEL+   +TPDI+NLQ+ ADFV AF+ GF+V DA+ALLR+++L+VESFE
Subjt:  PHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFE

Query:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        IKDVKTLRG+H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LRAV +RL+ER
Subjt:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Arabidopsis top hitse value%identityAlignment
AT3G02640.1 unknown protein3.1e-5267.3Show/hide
Query:  PSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTG
        P  S+  SHY+THKLFL  NY+LLGA+SSCIFLTLSLRL+PSLCG  LI LH  TIAAAVSGCA A+    RW+  HM+ TVLTAIFQGSV+VL++T T 
Subjt:  PSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTG

Query:  DFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGV
        +FL  L SYVRE++ ++ILKLAGGL VV+F LEW+VL LAFFLKYYA+V+G+   NNGV
Subjt:  DFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGV

AT3G13230.1 RNA-binding KH domain-containing protein1.7e-9581.02Show/hide
Query:  STSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCA
        ST MEVET    +       PPKP F PLK HEM+DG+VQFRK++VPP+RYSPLKKAW++IYTPIYDQMK+DIRMNLKARKVELKTRADTPDISNLQK A
Subjt:  STSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCA

Query:  DFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPA
        DFVHAFMLGFD+ DAI+LLR+DELYVESFEIKDVKTL+GEHLSRAIGRLSGK GKTKFAIEN+TKTRIVIADT+IHILG+F+NIK+AR SLCSLI+GSPA
Subjt:  DFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPA

Query:  GKVYSKLRAVTARLAE
        GKVYSKLR+V+ARL E
Subjt:  GKVYSKLRAVTARLAE

AT5G16250.1 unknown protein1.1e-5268.55Show/hide
Query:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVA
        MGF    + SS +  SHYHTHK+FL++NYILLGAASSCIFLTLSLRL+PS+CG  LI LH  TIAAAVSGCA A+    RW+  HMV TVLTAIFQGSV+
Subjt:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVA

Query:  VLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEG
        VL++T T  FL  LKSYVREED AVILKL GGL +V+F L+W+VL  AFFLKYYA+V+G
Subjt:  VLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEG

AT5G36710.1 unknown protein1.3e-4568.21Show/hide
Query:  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAM-----AAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRT
        MS+S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC++     +A AS R +G HMV TVLTAIFQG+V+VL++TRT
Subjt:  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAM-----AAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRT

Query:  GDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVE
        GDFL  LKSYVREEDG VILKL+GGL V+MF LEW+VL LAF LKY  +++
Subjt:  GDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVE

AT5G36800.1 unknown protein1.3e-4568.21Show/hide
Query:  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAM-----AAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRT
        MS+S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC++     +A AS R +G HMV TVLTAIFQG+V+VL++TRT
Subjt:  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAM-----AAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRT

Query:  GDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVE
        GDFL  LKSYVREEDG VILKL+GGL V+MF LEW+VL LAF LKY  +++
Subjt:  GDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCTCCATTACCGCGAATCCATCAAGCTCAATGAGCCGATCCCATTACCACACTCACAAGCTCTTCCTCTACACAAATTACATCCTCCTCGGCGCCGCCTCCAG
CTGCATTTTCCTCACTCTCTCCCTCCGTCTCCTCCCCTCTCTCTGCGGCCTCTCCCTCATCTTTCTCCACATCCTCACCATTGCTGCCGCCGTCTCCGGTTGCGCCATGG
CCGCCGCCGCTTCGGCTCGATGGTTCGGAGTACACATGGTGTTCACGGTTCTGACCGCGATATTCCAAGGATCGGTGGCGGTGCTGGTGTATACAAGAACAGGGGATTTT
CTGTTGGAGCTGAAATCGTATGTTAGAGAAGAAGATGGGGCTGTGATATTGAAATTGGCTGGTGGATTGAGTGTGGTTATGTTTGTTTTGGAATGGGTTGTTCTTACTTT
GGCTTTCTTTTTGAAGTATTATGCGTTTGTGGAAGGTGAAGGGAGTAATAACAATGGTGTTATGAGGAGTGCTAAGCCGCCTCATTCCTTTACCCTCCATCTTCACAATC
TCGCCTTCTCCTCTTCTTCTGACAACTTCACTTGGTACCATCCCGCAGCCTCCTCCGTCTCGCTCGCTACTTCCGCCGCCGCCGCACCCCTTCTTCACACATTTTTCTAC
CTTTTCTTCGTCTCAGTTTTTGGGTGTTTTCAGCTGTGGGAAACTCGGCATAATTCCATAATGCAGTCGACCGAAGCCTCCACTTCTATGGAAGTGGAAACAGTTGAAAC
TCTATCAAAAAATGTAGTTAGCACATTCCCACCGAAACCACAGTTTGATCCTCTAAAGCCTCATGAGATGAATGATGGTCGAGTTCAGTTCCGAAAGGTCTCAGTTCCTC
CACATCGGTATTCCCCTCTCAAGAAAGCATGGATGGAGATCTACACCCCAATTTATGATCAGATGAAAATCGACATCCGAATGAACCTCAAGGCTCGGAAAGTCGAGTTG
AAAACCAGAGCAGACACACCTGACATCAGTAACTTGCAGAAGTGTGCAGATTTTGTTCATGCTTTCATGCTCGGTTTCGATGTGATTGATGCCATTGCACTCTTACGAGT
GGATGAACTCTATGTGGAGTCTTTTGAGATTAAAGATGTTAAAACGCTGCGAGGTGAGCACTTGTCCCGTGCCATAGGGAGATTGTCTGGTAAAGCTGGTAAGACAAAAT
TCGCCATCGAAAACGCCACGAAGACGAGGATAGTTATTGCAGACACCAAGATTCACATATTAGGATCCTTTGCAAATATCAAGATTGCTAGGGATTCTCTTTGCAGCCTC
ATTTTAGGGTCTCCTGCTGGAAAAGTTTATTCAAAACTAAGGGCAGTTACAGCCAGATTGGCAGAAAGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCTCCATTACCGCGAATCCATCAAGCTCAATGAGCCGATCCCATTACCACACTCACAAGCTCTTCCTCTACACAAATTACATCCTCCTCGGCGCCGCCTCCAG
CTGCATTTTCCTCACTCTCTCCCTCCGTCTCCTCCCCTCTCTCTGCGGCCTCTCCCTCATCTTTCTCCACATCCTCACCATTGCTGCCGCCGTCTCCGGTTGCGCCATGG
CCGCCGCCGCTTCGGCTCGATGGTTCGGAGTACACATGGTGTTCACGGTTCTGACCGCGATATTCCAAGGATCGGTGGCGGTGCTGGTGTATACAAGAACAGGGGATTTT
CTGTTGGAGCTGAAATCGTATGTTAGAGAAGAAGATGGGGCTGTGATATTGAAATTGGCTGGTGGATTGAGTGTGGTTATGTTTGTTTTGGAATGGGTTGTTCTTACTTT
GGCTTTCTTTTTGAAGTATTATGCGTTTGTGGAAGGTGAAGGGAGTAATAACAATGGTGTTATGAGGAGTGCTAAGCCGCCTCATTCCTTTACCCTCCATCTTCACAATC
TCGCCTTCTCCTCTTCTTCTGACAACTTCACTTGGTACCATCCCGCAGCCTCCTCCGTCTCGCTCGCTACTTCCGCCGCCGCCGCACCCCTTCTTCACACATTTTTCTAC
CTTTTCTTCGTCTCAGTTTTTGGGTGTTTTCAGCTGTGGGAAACTCGGCATAATTCCATAATGCAGTCGACCGAAGCCTCCACTTCTATGGAAGTGGAAACAGTTGAAAC
TCTATCAAAAAATGTAGTTAGCACATTCCCACCGAAACCACAGTTTGATCCTCTAAAGCCTCATGAGATGAATGATGGTCGAGTTCAGTTCCGAAAGGTCTCAGTTCCTC
CACATCGGTATTCCCCTCTCAAGAAAGCATGGATGGAGATCTACACCCCAATTTATGATCAGATGAAAATCGACATCCGAATGAACCTCAAGGCTCGGAAAGTCGAGTTG
AAAACCAGAGCAGACACACCTGACATCAGTAACTTGCAGAAGTGTGCAGATTTTGTTCATGCTTTCATGCTCGGTTTCGATGTGATTGATGCCATTGCACTCTTACGAGT
GGATGAACTCTATGTGGAGTCTTTTGAGATTAAAGATGTTAAAACGCTGCGAGGTGAGCACTTGTCCCGTGCCATAGGGAGATTGTCTGGTAAAGCTGGTAAGACAAAAT
TCGCCATCGAAAACGCCACGAAGACGAGGATAGTTATTGCAGACACCAAGATTCACATATTAGGATCCTTTGCAAATATCAAGATTGCTAGGGATTCTCTTTGCAGCCTC
ATTTTAGGGTCTCCTGCTGGAAAAGTTTATTCAAAACTAAGGGCAGTTACAGCCAGATTGGCAGAAAGGTTTTGATCTTTCATGATGATTATATTAATTTATGTGAGTTT
CTCTTGATTAATGATTTTTGCATACACTAGTTGTTTGAGGATGAAGTGTATAACATTTTCAAAAAGCTTATGCATCGAAGTTTTGTCCGAGATACCGATAATTAATCCAT
CTATCTTCACAAACTGGGTATGGGGTGATTGGCCTTTGCTGGTGTCGTTTTTATACCGTTGATCGAGGTGCATATGTAGTAGATCTGTTGATTAATTGATGTAAACATTG
ATATGTAACTATTTGGGTCTACTTATAAAGTGTGCTTCATTTTATGAGAGAAAGAAAGGAGTTTAGTATTTTCTGCTTAACACAACTGGGTTTCACTTTCAAGTTTCAAG
TTAGATTTTTTATTAGTCATTTCTTTTGTTTCCTGGAGTTAAAATGCAGATTATGGGTGCAAGGTGAAAACCAAAACCCAAAGAATTGCT
Protein sequenceShow/hide protein sequence
MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDF
LLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVMRSAKPPHSFTLHLHNLAFSSSSDNFTWYHPAASSVSLATSAAAAPLLHTFFY
LFFVSVFGCFQLWETRHNSIMQSTEASTSMEVETVETLSKNVVSTFPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVEL
KTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
ILGSPAGKVYSKLRAVTARLAERF