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Clc10G04215 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G04215
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTransmembrane protein, putative
Genome locationClcChr10:4687818..4690290
RNA-Seq ExpressionClc10G04215
SyntenyClc10G04215
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596774.1 hypothetical protein SDJN03_09954, partial [Cucurbita argyrosperma subsp. sororia]3.8e-2574.12Show/hide
Query:  LPSSSRSPIHRNGIQDPAAVATMCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLCGGGGRPFFAAPPPR
        LP      IH N  QDPA+ ATMCCFGKVCM C+CL+LV V IG LFGFG+FKDGFHKIK KVDFCDGDLC G GRPFFAAPP R
Subjt:  LPSSSRSPIHRNGIQDPAAVATMCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLCGGGGRPFFAAPPPR

KAG7015596.1 hypothetical protein SDJN02_23232, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-2583.82Show/hide
Query:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLC-----GGGGRPFFAAPPPR
        MCCFGKVCMLCTCLILVVV +GFLFGFGVFKDGFHKIK K DFCDG +C     GGGGRPFFAAPPPR
Subjt:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLC-----GGGGRPFFAAPPPR

KAG7028302.1 hypothetical protein SDJN02_09483, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-2574.12Show/hide
Query:  LPSSSRSPIHRNGIQDPAAVATMCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLCGGGGRPFFAAPPPR
        LP      IH N  QDPA+ ATMCCFGKVCM C+CL+LV V IG LFGFG+FKDGFHKIK KVDFCDGDLC G GRPFFAAPP R
Subjt:  LPSSSRSPIHRNGIQDPAAVATMCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLCGGGGRPFFAAPPPR

XP_022932418.1 uncharacterized protein LOC111438773 [Cucurbita moschata]4.9e-2586.36Show/hide
Query:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLC---GGGGRPFFAAPPPR
        MCCFGKVCMLCTCLILVVV +GFLFGFGVFKDGFHKIK K DFCDG +C   GGGGRPFFAAPPPR
Subjt:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLC---GGGGRPFFAAPPPR

XP_038905566.1 uncharacterized protein Os04g0629400 [Benincasa hispida]1.9e-2484.06Show/hide
Query:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLC------GGGGRPFFAAPPPR
        MCCFGKVCMLCTCLILVVV IG LFGFGVFKDGFHKIK KVD+CDG LC      GGGGRPFFAAPPPR
Subjt:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLC------GGGGRPFFAAPPPR

TrEMBL top hitse value%identityAlignment
A0A0A0L2S1 Uncharacterized protein1.8e-2082.54Show/hide
Query:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLCGGGGRPFFA-APPP
        MCC GKVCMLCTCLILVVV IG LFGFGVFKDGFHKIK KVDFCDG  CGGGG   F+ APPP
Subjt:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLCGGGGRPFFA-APPP

A0A1S2XMC8 uncharacterized protein LOC1014954027.0e-1769.84Show/hide
Query:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLCGGGGRPFFA-APPP
        MCC GK+CMLCTCL+LVV+ IGF+FGFGVFK GFHK+K  V +CD    G GGRPFF  APPP
Subjt:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLCGGGGRPFFA-APPP

A0A1S3BL26 uncharacterized protein LOC1034910084.5e-2488.89Show/hide
Query:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLCGGGGRPFFAAPPPR
        MCCFGK+CMLCTCLILVVV IG LFGFGVFKDGFHKIK KVDFCDG LC GGGRPFF APPPR
Subjt:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLCGGGGRPFFAAPPPR

A0A6J1EWB7 uncharacterized protein LOC1114387732.4e-2586.36Show/hide
Query:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLC---GGGGRPFFAAPPPR
        MCCFGKVCMLCTCLILVVV +GFLFGFGVFKDGFHKIK K DFCDG +C   GGGGRPFFAAPPPR
Subjt:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLC---GGGGRPFFAAPPPR

I1M6D3 Uncharacterized protein7.0e-1771.43Show/hide
Query:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLCGGGGRPFFA-APPP
        MCC G++CMLCTCL+LVV+ IG +FGFGVFK GFHKIK  V FCD   CGGGGRPF   APPP
Subjt:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLCGGGGRPFFA-APPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13275.1 unknown protein1.1e-1463.08Show/hide
Query:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDF-CDGDL-CGGG-GRPFFAAPPP
        MCC G++CMLCTCL+LVV+ IGFLFGFGVFKDGFHKI   +   CD    CGGG GR  +  P P
Subjt:  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDF-CDGDL-CGGG-GRPFFAAPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCACGACTGCTCTCCCATTTATAAAGATTCCGTTCTTCCTTCTTCCTCTCGATCGCCAATTCACCGCAACGGAATCCAAGATCCGGCCGCCGTAGCCACGATGTG
CTGCTTTGGAAAGGTCTGCATGCTCTGCACCTGCCTGATTCTGGTGGTTGTGACCATCGGATTTCTCTTCGGATTCGGAGTTTTCAAAGACGGATTTCATAAGATTAAAG
GTAAGGTCGATTTCTGCGATGGAGATCTCTGCGGCGGCGGTGGAAGGCCTTTCTTCGCGGCTCCTCCTCCTCGGGATGTTTTGGGCTTGGTTTATTATGCTTGCATATAT
GATATATTTCACGTAGTACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCACGACTGCTCTCCCATTTATAAAGATTCCGTTCTTCCTTCTTCCTCTCGATCGCCAATTCACCGCAACGGAATCCAAGATCCGGCCGCCGTAGCCACGATGTG
CTGCTTTGGAAAGGTCTGCATGCTCTGCACCTGCCTGATTCTGGTGGTTGTGACCATCGGATTTCTCTTCGGATTCGGAGTTTTCAAAGACGGATTTCATAAGATTAAAG
GTAAGGTCGATTTCTGCGATGGAGATCTCTGCGGCGGCGGTGGAAGGCCTTTCTTCGCGGCTCCTCCTCCTCGGGATGTTTTGGGCTTGGTTTATTATGCTTGCATATAT
GATATATTTCACGTAGTACTGTAA
Protein sequenceShow/hide protein sequence
MVHDCSPIYKDSVLPSSSRSPIHRNGIQDPAAVATMCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGDLCGGGGRPFFAAPPPRDVLGLVYYACIY
DIFHVVL