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Clc10G04310 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G04310
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr10:4808040..4808993
RNA-Seq ExpressionClc10G04310
SyntenyClc10G04310
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577526.1 hypothetical protein SDJN03_25100, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2682.14Show/hide
Query:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPPPDKAAEGLLNYVAGHHDHH
        MEIP KV KFRFHI   LIL L LFSL+LLAP+FLSLLA+FWPL LSTA+FLLAVLLF NTSLP PDKAAEGLLNYVAGH DHH
Subjt:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPPPDKAAEGLLNYVAGHHDHH

KAG6596766.1 hypothetical protein SDJN03_09946, partial [Cucurbita argyrosperma subsp. sororia]7.2e-2776.34Show/hide
Query:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPPPDKAAEGLLNYVAGHHDHHHIDASLKSD
        MEIP+KV +FRFH    L LCLTLFSL+LLAPR LSL+AYFWPL LSTA+FLLAVLLFAN SLPPPDK  EGLLNYVAGH D   +DASLK+D
Subjt:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPPPDKAAEGLLNYVAGHHDHHHIDASLKSD

KAG7028299.1 hypothetical protein SDJN02_09480, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-2777.42Show/hide
Query:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPPPDKAAEGLLNYVAGHHDHHHIDASLKSD
        MEIP+KV KFRFH    L LCLTLFSL+LLAPR LSL+AYFWPL LSTA+FLLAVLLFAN SLPPPDK  EGLLNYVAGH D   +DASLK+D
Subjt:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPPPDKAAEGLLNYVAGHHDHHHIDASLKSD

KGN56016.1 hypothetical protein Csa_010324 [Cucumis sativus]5.9e-2983.87Show/hide
Query:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPPPDKAAEGLLNYVAGHHDHHHIDASLKSD
        MEIP+KV+KFRFHI VTLIL LTLFSL LLAP FLSLLAYFWPLFLSTA+FLLAVLLFANTSLP PDKAAEGLL+YVAGHHD     +SLKSD
Subjt:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPPPDKAAEGLLNYVAGHHDHHHIDASLKSD

PON94035.1 hypothetical protein TorRG33x02_100740 [Trema orientale]5.0e-2061.7Show/hide
Query:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPP-PDKAAEGLLNYVAG--------HHDHHH
        MEIP K+V+F+FHI + LILC+ + +L+L+APRF+++LAYFWPL LSTA+FL AVL+F  TS PP  DKA EGLL+YVAG        HHDHHH
Subjt:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPP-PDKAAEGLLNYVAG--------HHDHHH

TrEMBL top hitse value%identityAlignment
A0A0A0L7E9 Uncharacterized protein2.8e-2983.87Show/hide
Query:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPPPDKAAEGLLNYVAGHHDHHHIDASLKSD
        MEIP+KV+KFRFHI VTLIL LTLFSL LLAP FLSLLAYFWPLFLSTA+FLLAVLLFANTSLP PDKAAEGLL+YVAGHHD     +SLKSD
Subjt:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPPPDKAAEGLLNYVAGHHDHHHIDASLKSD

A0A2P5AA24 Uncharacterized protein3.5e-1957.29Show/hide
Query:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPP-PDKAAEGLLNYVAG--------HHDHHHID
        MEIP K+V+F+FHI + +ILC+ + +L+L+A RF+++LAYFWPL LSTA+FL AVL+F  TS PP  DKA EGLL+YVAG        HH HHH++
Subjt:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPP-PDKAAEGLLNYVAG--------HHDHHHID

A0A2P5F8A8 Uncharacterized protein2.4e-2061.7Show/hide
Query:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPP-PDKAAEGLLNYVAG--------HHDHHH
        MEIP K+V+F+FHI + LILC+ + +L+L+APRF+++LAYFWPL LSTA+FL AVL+F  TS PP  DKA EGLL+YVAG        HHDHHH
Subjt:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPP-PDKAAEGLLNYVAG--------HHDHHH

A0A371EZD3 Uncharacterized protein (Fragment)7.7e-1963.64Show/hide
Query:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTS-LPPPD-----KAAEGLLNYVAGHHDHHHIDASLKSD
        MEIP KV+KFRFH    L+ CLTLFSLIL+APRF++LLAYFWPLFLSTAV L  V  FA TS LP  D      A +GLL+YVAGHHD   +D   KSD
Subjt:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTS-LPPPD-----KAAEGLLNYVAGHHDHHHIDASLKSD

M5WI68 Uncharacterized protein1.0e-1861.45Show/hide
Query:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPPPDKAAEGLLNYVAGHHDH
        MEIP K++KF+FH    LILCLTL+++ L+APRFL++LAYFWPLFLSTA+FL AV++F  T+LP  + + EGLL+YVAG  +H
Subjt:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPPPDKAAEGLLNYVAGHHDH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13175.1 unknown protein1.3e-1041.51Show/hide
Query:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPPPDK------------AAEGLLNY-VAGHHDHHHID
        ME   K++KF+  I    +L L   +L+  +P FL++L+YFWPLFLSTA+FL AV  FA TS  P               AAEG+L+Y V G H+    D
Subjt:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPPPDK------------AAEGLLNY-VAGHHDHHHID

Query:  ASLKSD
        +  K D
Subjt:  ASLKSD

AT4G16400.1 unknown protein2.6e-1142.35Show/hide
Query:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPPPDKAAEGLLNYVAGHHDHHH
        MEI  K++++RFH  VT+++ + + SL+  APR L++LAYFWPLF STA FL   + F        +   E L++YVAG  +  H
Subjt:  MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPPPDKAAEGLLNYVAGHHDHHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCCCCACCAAAGTAGTGAAGTTCAGATTCCACATTGCAGTAACCCTAATCCTCTGTTTAACTCTCTTCTCCCTCATCCTTCTCGCTCCAAGATTCCTCTCGCT
CCTCGCTTACTTTTGGCCTCTCTTCCTCTCCACCGCCGTCTTCCTCCTCGCCGTCCTCCTCTTCGCCAACACCTCCCTTCCGCCGCCTGATAAAGCCGCCGAAGGCCTCC
TCAACTATGTCGCCGGCCACCACGACCACCACCACATCGACGCCTCTCTCAAATCCGATTAA
mRNA sequenceShow/hide mRNA sequence
GTGAATTATGAGTTTAAAAAGGGTAAAGAAAGAAACAACATTGAAGAGAAGAAAAGCAAAAGAGAGAATTACCCATTTCTCCCTTTCCCAAACAAAACAAAATATAACAT
TTTAGCCTCAGCCTCAGGGAATCTCTGAAGAGAGAATTCAGAATTCAGAATTCAGAATTGAGAGAGAGAGAGAAAGAAAAAGAAAATTCAAATTAGAAGCAAAAAGTGAA
GTTGAGTCATTGATCATCGTCTTGATTCCTGATTTCAGTTTTTTCTATCTTAATTTCCATCCATGGAGATCCCCACCAAAGTAGTGAAGTTCAGATTCCACATTGCAGTA
ACCCTAATCCTCTGTTTAACTCTCTTCTCCCTCATCCTTCTCGCTCCAAGATTCCTCTCGCTCCTCGCTTACTTTTGGCCTCTCTTCCTCTCCACCGCCGTCTTCCTCCT
CGCCGTCCTCCTCTTCGCCAACACCTCCCTTCCGCCGCCTGATAAAGCCGCCGAAGGCCTCCTCAACTATGTCGCCGGCCACCACGACCACCACCACATCGACGCCTCTC
TCAAATCCGATTAATCAATCACACGGTTATTCTTCTTCTCTCTATTTAAATCTCAATCCTCAAATCAATTATTACTCTAATTTCTTTACTCAATAACGCCTTTTCTAATC
GATTCCCTCCGATCTGATGTCATGAACATGCCTCTGATTTGTACTTTTTTCTTTCTTCTTCTTCTTGAGGTCGGTTACTGGTAGTGTTTAGATCGAACTATGTGCTTTTT
TTGTTTCTGCTTCTTATGAATTTCAGTTGTTGATCCGATGAATTTTGAGCTTGAATCTGAAATATCTGAAGTAAAAGCCGTGTCCTGAATCGAATTGGAGAAAGAAAGGG
GGAATTTTATCTGTTTTCTTTTTTTTTTCTTTTTTTTGGGTTAAATTTCTTGGATTAGCGTAATATGTAATTAG
Protein sequenceShow/hide protein sequence
MEIPTKVVKFRFHIAVTLILCLTLFSLILLAPRFLSLLAYFWPLFLSTAVFLLAVLLFANTSLPPPDKAAEGLLNYVAGHHDHHHIDASLKSD