; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G04410 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G04410
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDNA-directed RNA polymerases I and III subunit RPAC1
Genome locationClcChr10:4908326..4916063
RNA-Seq ExpressionClc10G04410
SyntenyClc10G04410
Gene Ontology termsGO:0006360 - transcription by RNA polymerase I (biological process)
GO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005736 - RNA polymerase I complex (cellular component)
GO:0001054 - RNA polymerase I activity (molecular function)
GO:0001056 - RNA polymerase III activity (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR001514 - DNA-directed RNA polymerase, 30-40kDa subunit, conserved site
IPR011262 - DNA-directed RNA polymerase, insert domain
IPR011263 - DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR033901 - DNA-directed RNA polymerases I and III subunit AC40
IPR036603 - RNA polymerase, RBP11-like subunit
IPR036643 - DNA-directed RNA polymerase, insert domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596753.1 DNA-directed RNA polymerases I and III subunit RPAC1, partial [Cucurbita argyrosperma subsp. sororia]6.4e-19590.67Show/hide
Query:  LNRRLIMSGKDKSLHNMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDL
        L  R IMSGKDK+LHNMSES+SEQ+ +GKEGIE+IMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDL
Subjt:  LNRRLIMSGKDKSLHNMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDL

Query:  KEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSK
        KEDD+EFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGK RLT  SK
Subjt:  KEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSK

Query:  ALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEI
        ALTWLPNGSEFPLVSDKSVSN+KPKTYTSFSCSQD+LPEF+NNPIGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+I
Subjt:  ALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEI

Query:  EDELAEELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ
        EDELAEELK KCPVNVFDIED+A+G+KRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+
Subjt:  EDELAEELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ

XP_022936430.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata]9.3e-19491.33Show/hide
Query:  MSGKDKSLHNMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIE
        MSGKDK+LHNMSES+SEQ+ +GKEGIE+IMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDLKEDD+E
Subjt:  MSGKDKSLHNMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIE

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGK RLT  SKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQD+LPEF+NNPIGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ
        ELK KCPVNVFDIED+A+G+KRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+
Subjt:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ

XP_023005438.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita maxima]6.0e-19391.06Show/hide
Query:  MSGKDKSLHNMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIE
        MSG+DK+LH+MSES+SEQ+ +GKEGIE+IMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDLKEDD+E
Subjt:  MSGKDKSLHNMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIE

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGK RLT  S+ALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSNSKPKTYTSFSCSQD+LPEF+NNPIGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ
        ELK KCPVNVFDIED+A+G+KRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+
Subjt:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ

XP_023540473.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita pepo subsp. pepo]1.6e-19391.33Show/hide
Query:  MSGKDKSLHNMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIE
        MSGKDK+LHNMSES+SE + +GKEGIE+IMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDLKEDD+E
Subjt:  MSGKDKSLHNMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIE

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGK RLT  SKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQD+LPEF+NNPIGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ
        ELK KCPVNVFDIED+A+G+KRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+
Subjt:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ

XP_038903474.1 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida]1.5e-19995.12Show/hide
Query:  MSGKDKSLHNMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIE
        MSGKDKSLHNMS+SESEQ+G+ KEGIE+IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIE
Subjt:  MSGKDKSLHNMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIE

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGL+PIHVDPRLFEYSDKDTPNEKNTIVFRLHA CERGK RLTV SKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSNSKPKTYTSFSCSQD+LPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEI+DELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ
        ELK+KCPVNVFDIED+A G+KRATVARPRACTLCRECIRGD WEKRVALRRVKDHFIFKIESTGALPP+
Subjt:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ

TrEMBL top hitse value%identityAlignment
A0A0A0L637 DNA-directed RNA polymerases I and III subunit RPAC16.1e-19191.62Show/hide
Query:  MSGKDKSLHNMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIE
        MSGKDK+LHNMSESESEQ+G+ KEGIE+IMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGAFASMG DNSLRLD FRNNFKIEVIDLKEDDIE
Subjt:  MSGKDKSLHNMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIE

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLP
        FDMIGIDP+LANAFRRILI+EVPTMAIEKVL ANNTSIVQDEVLAHRLGL+PI VDPRLF+YSDKD PNE NTIVFRLHA CERGK RLTV SKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSL-PEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA
        NGSEFPLVSDKSVSNSKPKTYTSFSCSQ++L  EFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVL+EEIEDELA
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSL-PEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA

Query:  EELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ
        EEL++KCPVNVFDIED+A G+KRATVARPR CTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP+
Subjt:  EELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ

A0A1S4DX61 DNA-directed RNA polymerases I and III subunit RPAC16.3e-18890.79Show/hide
Query:  MSGKDKSLH-NMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDI
        MSGKDK+LH  M+ESESEQ+ +GKEGIE+IMNLPDVPMKLPPH+ELQRTRVECK DAPIHTDTIQYSGAFASMG DNSLRLD FRNNFKIEVI+LK DDI
Subjt:  MSGKDKSLH-NMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDI

Query:  EFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWL
        EFDMIGIDP+LANAFRRILIAEVPTMAIEKVL ANNTSIVQDEVLAHRLGLIPI VDPRLF+YSDKD PNE NTIVFRLHARCERGK RLTV S+ALTWL
Subjt:  EFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWL

Query:  PNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA
        PNGSEFPLVSDKS+ NSKP+TYTSFSCSQD LPEFS N IGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+LLEEIEDELA
Subjt:  PNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA

Query:  EELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP
        EELK KCPVNVFDIED+A G+KRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP
Subjt:  EELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP

A0A6J1DXI7 DNA-directed RNA polymerases I and III subunit RPAC13.1e-18791.36Show/hide
Query:  MSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSL
        MS+SESEQ   GKEGIE+IMNLPDVPMKLPPHLE+QRTRVECKADAPIHTDTIQYSGA+ASMGVDNSLRLDYFRNNFKIEVIDL EDDIEFDMIGIDP+L
Subjt:  MSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSL

Query:  ANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLPNGSEFPLVSD
        ANAFRRILIAEVPTMAIEKVLVANNTS++QDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK RLTV SK LTWLPNGSEFPLVSD
Subjt:  ANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLPNGSEFPLVSD

Query:  KSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNV
        KSV NSKPKTYTSFSCSQD+LPEFSNN IGPKD+DII+ARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL EEIEDELAEELK+KCPV+V
Subjt:  KSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNV

Query:  FDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ
        FDIED+A+G+KRA VARPR+CTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+
Subjt:  FDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ

A0A6J1FDA3 DNA-directed RNA polymerases I and III subunit RPAC14.5e-19491.33Show/hide
Query:  MSGKDKSLHNMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIE
        MSGKDK+LHNMSES+SEQ+ +GKEGIE+IMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDLKEDD+E
Subjt:  MSGKDKSLHNMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIE

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGK RLT  SKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQD+LPEF+NNPIGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ
        ELK KCPVNVFDIED+A+G+KRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+
Subjt:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ

A0A6J1L269 DNA-directed RNA polymerases I and III subunit RPAC12.9e-19391.06Show/hide
Query:  MSGKDKSLHNMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIE
        MSG+DK+LH+MSES+SEQ+ +GKEGIE+IMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDLKEDD+E
Subjt:  MSGKDKSLHNMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIE

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGK RLT  S+ALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSNSKPKTYTSFSCSQD+LPEF+NNPIGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ
        ELK KCPVNVFDIED+A+G+KRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+
Subjt:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ

SwissProt top hitse value%identityAlignment
O15160 DNA-directed RNA polymerases I and III subunit RPAC11.0e-7044.28Show/hide
Query:  LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
        +E  R+RV        +  T  + G ++  G D++   D F  NF+++V+ + E+ +EFDM+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE
Subjt:  LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE

Query:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKRLT--------------VMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS
        +LAHRLGLIPIH DPRLFEY ++  +   E +T+ FRL  RC R                   V ++ +TW+P G++  L                    
Subjt:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKRLT--------------VMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS

Query:  QDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVAR
              F    I P   DI++A+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL       V +++++  G+K A VA 
Subjt:  QDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVAR

Query:  PRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP
        PR  T  RE  R +  +K V L RV+DH+IF +ESTG LPP
Subjt:  PRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP

O94616 DNA-directed RNA polymerases I and III subunit RPAC15.7e-6138.55Show/hide
Query:  LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
        ++  RT +   +D      ++ + G +     DN   LD F+ N K+ +  L ++ + F++ GID S+ANAFRRILIAE+PT+A E V + NNTSI+QDE
Subjt:  LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE

Query:  VLAHRLGLIPIHVDPRLFEYSDKDTPNEK------NTIVFRLHARCERG----------KRLTVMSKA----LTWLPNGSEFPLVSDKSVSNSKPKTYTS
        VL+HR+GL+PI  DP +F++     P ++      +T+VF L+ +CE            KRL V S+     L W P G +                   
Subjt:  VLAHRLGLIPIHVDPRLFEYSDKDTPNEK------NTIVFRLHARCERG----------KRLTVMSKA----LTWLPNGSEFPLVSDKSVSNSKPKTYTS

Query:  FSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRA
                  F++NPI   + DI++A+L PGQEI+LEAHA+ G+G+ HAK+SPVATA YR+LP + +L  IE E A + ++  P  V ++E+  DG+K+A
Subjt:  FSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRA

Query:  TVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP
         VA  R  T+ REC+R   +  +V L RV+DH++F +ESTG + P
Subjt:  TVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP

P52432 DNA-directed RNA polymerases I and III subunit RPAC13.3e-6944.87Show/hide
Query:  LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
        +E  RTRV        +  T  + G +A  G D++   + F  NF+++V+ + ED +EFDM+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE
Subjt:  LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE

Query:  VLAHRLGLIPIHVDPRLFEYSD--KDTPNEKNTIVFRLHARCERGKRLT--------------VMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS
        +LAHRLGLIPI  DPRLFEY +  ++   E +T+ FRL  RC R                   V ++ +TW+P G++                       
Subjt:  VLAHRLGLIPIHVDPRLFEYSD--KDTPNEKNTIVFRLHARCERGKRLT--------------VMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS

Query:  QDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVAR
         D  PE     I P   DI++A+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP + LLE +E E AEEL +     V ++E++  G+K A VA 
Subjt:  QDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVAR

Query:  PRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP
         R  T  RE  R +  +K V L RV+DH+IF +ESTG LPP
Subjt:  PRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP

Q32L22 DNA-directed RNA polymerases I and III subunit RPAC12.7e-7144.87Show/hide
Query:  LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
        +E  RTRV        +  T  + G ++  G D++   D F  NF+++V+ + E+ +EFDM+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE
Subjt:  LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE

Query:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKRLT--------------VMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS
        +LAHRLGLIPIH DPRLFEY ++  +   E +T+ FRL  RC R                   V ++ +TW+P G++  L                    
Subjt:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKRLT--------------VMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS

Query:  QDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVAR
              F    I P   DI++A+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL       V +++++  G+K A VA 
Subjt:  QDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVAR

Query:  PRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP
        PR  T  RE  R +  +K V L RV+DHFIF +ESTG LPP
Subjt:  PRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP

Q54SN4 DNA-directed RNA polymerases I and III subunit rpac17.4e-6942.99Show/hide
Query:  PHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQ
        P+LE +RT+V        +     YSGA+ S+G DNS  L+ F+ NFKI ++    +++ F+MIGID  +ANA RRI+I+E+PTMAIEKV + NNTSI+Q
Subjt:  PHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQ

Query:  DEVLAHRLGLIPIHVDPRLFEYSDKDTPNE----KNTIVFRLHARCER----GKRL--TVMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSL
        DEVLAHRLG+IPI VDPR F +     PN+    ++T++F+L  +CE+    GK +  T +SK L W+P   +                       ++  
Subjt:  DEVLAHRLGLIPIHVDPRLFEYSDKDTPNE----KNTIVFRLHARCER----GKRL--TVMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSL

Query:  PEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVARPRAC
        P   + P  P + DI + +L PGQ I+++ +  K +G+ H KWSPV TA YR+ P + + + I+ + A +L EKCP  VFDIED      +   ARP  C
Subjt:  PEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVARPRAC

Query:  TLCRECIRGDAWEKRVALRRVKDHFIFKIESTGAL
        T+CRECIR   +E+ V + RV+DHFIF IESTGAL
Subjt:  TLCRECIRGDAWEKRVALRRVKDHFIFKIESTGAL

Arabidopsis top hitse value%identityAlignment
AT1G60620.1 RNA polymerase I subunit 431.4e-13168.51Show/hide
Query:  IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIE
        I +LPDVP  LPPHLELQRTRV CK D+ IH   I +SGA++SMGVDNS+RL+ F  +FK++VI L E D+ FDMIG+   +ANAFRRIL+AE+P+MAIE
Subjt:  IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIE

Query:  KVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERG-KRLTVMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS
        KV VANNTS++QDEVLAHRLGLIPI  DPRLFEY S+ D PNEKNTIVF+LH +C +G  R  V++  L WLPNGSE  L+ +   S + PKTYTSF+ S
Subjt:  KVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERG-KRLTVMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS

Query:  QDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVAR
        QDS PEF+ NPI P   DI++A+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+E E + AEEL + CP  VFDIEDM  GRKRATVAR
Subjt:  QDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVAR

Query:  PRACTLCRECIR-GDAWEKRVALRRVKDHFIFKIESTGALPPQ
        PR C+LCRECIR G  WE +V LRRVK+HFIF IESTG+ PP+
Subjt:  PRACTLCRECIR-GDAWEKRVALRRVKDHFIFKIESTGALPPQ

AT1G60850.1 DNA-directed RNA polymerase family protein4.8e-12465.31Show/hide
Query:  IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAI
        I +LPDVP  LPPHL+ Q+TRV  K +AP HT +  YSG + +S   D++++L  F +NFK++V+ L + D+EFDMIGID + ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
        EKVL+A NTS++ DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + + RL V++  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC

Query:  SQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVA
        SQDSLPEF+NNPI P D DI++A+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  E+EDELAE L   CP NVFDIEDM  G+KRATVA
Subjt:  SQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVA

Query:  RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ
        +PR CTLC+EC+R D     V L  VK+HFIF IESTG+LPP+
Subjt:  RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ

AT1G60850.2 DNA-directed RNA polymerase family protein4.8e-12465.31Show/hide
Query:  IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAI
        I +LPDVP  LPPHL+ Q+TRV  K +AP HT +  YSG + +S   D++++L  F +NFK++V+ L + D+EFDMIGID + ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
        EKVL+A NTS++ DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + + RL V++  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC

Query:  SQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVA
        SQDSLPEF+NNPI P D DI++A+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  E+EDELAE L   CP NVFDIEDM  G+KRATVA
Subjt:  SQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVA

Query:  RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ
        +PR CTLC+EC+R D     V L  VK+HFIF IESTG+LPP+
Subjt:  RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQ

AT1G60850.3 DNA-directed RNA polymerase family protein3.7e-9265.27Show/hide
Query:  IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAI
        I +LPDVP  LPPHL+ Q+TRV  K +AP HT +  YSG + +S   D++++L  F +NFK++V+ L + D+EFDMIGID + ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
        EKVL+A NTS++ DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + + RL V++  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGK-RLTVMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC

Query:  SQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV
        SQDSLPEF+NNPI P D DI++A+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEV
Subjt:  SQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV

AT2G15430.1 DNA-directed RNA polymerase family protein6.7e-3334.25Show/hide
Query:  KIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVD-------PRLFEYSDKDTPNEKNTIVFRLHA
        KI++ +LK+D  +F++   D S+ANA RR++I+EVPT+AI+ V +  N+S++ DE +AHRLGLIP+  +        R  +  D D   E  ++ FRL +
Subjt:  KIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVD-------PRLFEYSDKDTPNEKNTIVFRLHA

Query:  RCERGKRLTVMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAW
        +C   + L V S+ L            +D +V+   P  +T  S   DS           +   II+ +L  GQE++L A A KG+GK HAKWSP AT  
Subjt:  RCERGKRLTVMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAW

Query:  YRMLPEVVLLEEIEDELAEELK----EKCPVNVFDIEDMADGRKRATVARPRACTLCRECI-RGDAWEK--RVALRRVKDHFIFKIESTGAL
        +   P++++ E++ D L++E K    E  P  VF ++ +    ++  V  P A T   E I + +A  K   + +    D FIF +ESTGA+
Subjt:  YRMLPEVVLLEEIEDELAEELK----EKCPVNVFDIEDMADGRKRATVARPRACTLCRECI-RGDAWEK--RVALRRVKDHFIFKIESTGAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCGCTTCCATAGTGTCCCCAGAATAAGCCGTGCTCTTGAGTGCCGCCGCCGCCTTCTTTCTCGATTTTGCTTCTCCCCCGCGCAGCTCTTCCGACTTTTGGTCTC
AGTTACAGCCCAGCCCAACGACCAAATAACTGTGCGCATACTGAATCGAAGGTTGATAATGTCCGGTAAAGATAAGAGTTTGCATAATATGTCGGAGTCGGAATCTGAAC
AAGATGGTCTTGGCAAAGAAGGCATTGAATTTATTATGAACCTTCCAGACGTACCCATGAAGCTTCCGCCACATTTGGAATTGCAGAGAACTCGAGTCGAATGCAAAGCC
GATGCTCCCATTCATACAGATACCATACAGTATTCTGGAGCATTTGCTTCGATGGGTGTTGATAACAGTCTACGTCTGGATTATTTTCGCAACAACTTTAAAATTGAAGT
TATTGATCTCAAAGAGGATGACATTGAGTTTGACATGATTGGCATTGATCCATCACTTGCTAATGCATTTCGAAGAATCCTGATAGCCGAGGTTCCCACTATGGCTATTG
AAAAAGTTCTTGTTGCTAACAATACATCAATAGTCCAAGATGAAGTGCTTGCCCATAGGTTAGGTCTCATTCCAATTCATGTTGATCCGAGGCTTTTTGAGTACTCAGAT
AAAGACACGCCAAATGAGAAGAATACAATTGTTTTTAGACTCCACGCTCGCTGTGAACGTGGAAAACGTCTTACAGTGATGTCAAAAGCATTGACGTGGTTGCCGAATGG
CAGTGAATTTCCCTTGGTATCAGACAAATCAGTTTCAAACTCAAAACCCAAAACCTACACTTCTTTTAGTTGCAGCCAAGACTCACTGCCAGAATTTTCCAACAATCCAA
TTGGTCCAAAGGACAGTGATATTATACTGGCTAGACTTGGCCCGGGTCAGGAAATTGAACTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCC
CCGGTGGCCACTGCTTGGTACAGGATGCTTCCTGAGGTTGTACTCCTGGAAGAGATAGAGGATGAGCTAGCTGAAGAACTAAAAGAGAAATGTCCTGTTAATGTATTTGA
CATTGAAGACATGGCTGATGGTAGGAAAAGGGCAACGGTAGCACGCCCACGAGCTTGCACATTGTGTAGAGAATGCATAAGAGGGGATGCATGGGAGAAACGTGTCGCAT
TGCGTCGCGTGAAAGATCATTTCATTTTTAAGATTGAATCAACAGGAGCTTTACCTCCCCAGTGGAATAACTTCACCAATGGATTACCAAAGCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCGCTTCCATAGTGTCCCCAGAATAAGCCGTGCTCTTGAGTGCCGCCGCCGCCTTCTTTCTCGATTTTGCTTCTCCCCCGCGCAGCTCTTCCGACTTTTGGTCTC
AGTTACAGCCCAGCCCAACGACCAAATAACTGTGCGCATACTGAATCGAAGGTTGATAATGTCCGGTAAAGATAAGAGTTTGCATAATATGTCGGAGTCGGAATCTGAAC
AAGATGGTCTTGGCAAAGAAGGCATTGAATTTATTATGAACCTTCCAGACGTACCCATGAAGCTTCCGCCACATTTGGAATTGCAGAGAACTCGAGTCGAATGCAAAGCC
GATGCTCCCATTCATACAGATACCATACAGTATTCTGGAGCATTTGCTTCGATGGGTGTTGATAACAGTCTACGTCTGGATTATTTTCGCAACAACTTTAAAATTGAAGT
TATTGATCTCAAAGAGGATGACATTGAGTTTGACATGATTGGCATTGATCCATCACTTGCTAATGCATTTCGAAGAATCCTGATAGCCGAGGTTCCCACTATGGCTATTG
AAAAAGTTCTTGTTGCTAACAATACATCAATAGTCCAAGATGAAGTGCTTGCCCATAGGTTAGGTCTCATTCCAATTCATGTTGATCCGAGGCTTTTTGAGTACTCAGAT
AAAGACACGCCAAATGAGAAGAATACAATTGTTTTTAGACTCCACGCTCGCTGTGAACGTGGAAAACGTCTTACAGTGATGTCAAAAGCATTGACGTGGTTGCCGAATGG
CAGTGAATTTCCCTTGGTATCAGACAAATCAGTTTCAAACTCAAAACCCAAAACCTACACTTCTTTTAGTTGCAGCCAAGACTCACTGCCAGAATTTTCCAACAATCCAA
TTGGTCCAAAGGACAGTGATATTATACTGGCTAGACTTGGCCCGGGTCAGGAAATTGAACTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCC
CCGGTGGCCACTGCTTGGTACAGGATGCTTCCTGAGGTTGTACTCCTGGAAGAGATAGAGGATGAGCTAGCTGAAGAACTAAAAGAGAAATGTCCTGTTAATGTATTTGA
CATTGAAGACATGGCTGATGGTAGGAAAAGGGCAACGGTAGCACGCCCACGAGCTTGCACATTGTGTAGAGAATGCATAAGAGGGGATGCATGGGAGAAACGTGTCGCAT
TGCGTCGCGTGAAAGATCATTTCATTTTTAAGATTGAATCAACAGGAGCTTTACCTCCCCAGTGGAATAACTTCACCAATGGATTACCAAAGCTGTAG
Protein sequenceShow/hide protein sequence
MGRFHSVPRISRALECRRRLLSRFCFSPAQLFRLLVSVTAQPNDQITVRILNRRLIMSGKDKSLHNMSESESEQDGLGKEGIEFIMNLPDVPMKLPPHLELQRTRVECKA
DAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSD
KDTPNEKNTIVFRLHARCERGKRLTVMSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWS
PVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQWNNFTNGLPKL