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Clc10G04570 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G04570
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionserine-rich protein-related
Genome locationClcChr10:5053602..5054011
RNA-Seq ExpressionClc10G04570
SyntenyClc10G04570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN55991.1 hypothetical protein Csa_011649 [Cucumis sativus]2.6e-1967.09Show/hide
Query:  ALPEYDMEELKKTPHLLLSPTALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGD
        A+ E + ++LKK  +LL+SPTALSR+T     KSNCLCSPTTHIGSFRCRRHR+++++RGGSVGSNLSDL +KSEA  D
Subjt:  ALPEYDMEELKKTPHLLLSPTALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGD

PON86349.1 hypothetical protein TorRG33x02_179150 [Trema orientale]3.6e-1662.65Show/hide
Query:  LPEYDMEELKKTPHLL-LSPTAL-------SRITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL
        +PE ++EELKK  H+L +SP  +       S  T+ NCLCSPTTH GSFRCR HR+S M RGGSVGSNLS+LARKS A GDSL
Subjt:  LPEYDMEELKKTPHLL-LSPTAL-------SRITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL

TYK19387.1 putative PGPS/D10 protein [Cucumis melo var. makuwa]2.6e-1967.09Show/hide
Query:  ALPEYDMEELKKTPHLLLSPTALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGD
        A+ E + ++LKK  HLL+SPTALSR+T     KSNCLCSPTTHIGSFRCRRHR++ M+RG SVGSNLSDL +KSE   D
Subjt:  ALPEYDMEELKKTPHLLLSPTALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGD

XP_010103953.1 uncharacterized protein LOC21403113 [Morus notabilis]4.2e-1763.75Show/hide
Query:  LPEYDMEELKKTPHLLLSPTALSRITKS-----NCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL
        +P+ ++ ELKK  HLL SP A   +TKS     NCLCSPTTH GSFRCR HR+S M RGGSVGSNLS+LARK  A  DSL
Subjt:  LPEYDMEELKKTPHLLLSPTALSRITKS-----NCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL

XP_022143490.1 uncharacterized protein LOC111013367 [Momordica charantia]1.6e-2171.95Show/hide
Query:  ALPEYDMEELKKTPH-LLLSPTALSRI-----TKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL
        ALPE D++ELKK+ H L++SPTALSR+     TKSNCLCSPTTHIGSFRCRRHR++ ++RGGSVGSNLSDLA+KS A  DSL
Subjt:  ALPEYDMEELKKTPH-LLLSPTALSRI-----TKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL

TrEMBL top hitse value%identityAlignment
A0A0A0L7C7 Uncharacterized protein1.3e-1967.09Show/hide
Query:  ALPEYDMEELKKTPHLLLSPTALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGD
        A+ E + ++LKK  +LL+SPTALSR+T     KSNCLCSPTTHIGSFRCRRHR+++++RGGSVGSNLSDL +KSEA  D
Subjt:  ALPEYDMEELKKTPHLLLSPTALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGD

A0A2P5ELH4 Uncharacterized protein1.7e-1662.65Show/hide
Query:  LPEYDMEELKKTPHLL-LSPTAL-------SRITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL
        +PE ++EELKK  H+L +SP  +       S  T+ NCLCSPTTH GSFRCR HR+S M RGGSVGSNLS+LARKS A GDSL
Subjt:  LPEYDMEELKKTPHLL-LSPTAL-------SRITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL

A0A5D3D753 Putative PGPS/D10 protein1.3e-1967.09Show/hide
Query:  ALPEYDMEELKKTPHLLLSPTALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGD
        A+ E + ++LKK  HLL+SPTALSR+T     KSNCLCSPTTHIGSFRCRRHR++ M+RG SVGSNLSDL +KSE   D
Subjt:  ALPEYDMEELKKTPHLLLSPTALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGD

A0A6J1CNY2 uncharacterized protein LOC1110133678.0e-2271.95Show/hide
Query:  ALPEYDMEELKKTPH-LLLSPTALSRI-----TKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL
        ALPE D++ELKK+ H L++SPTALSR+     TKSNCLCSPTTHIGSFRCRRHR++ ++RGGSVGSNLSDLA+KS A  DSL
Subjt:  ALPEYDMEELKKTPH-LLLSPTALSRI-----TKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL

W9SBP1 Uncharacterized protein2.0e-1763.75Show/hide
Query:  LPEYDMEELKKTPHLLLSPTALSRITKS-----NCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL
        +P+ ++ ELKK  HLL SP A   +TKS     NCLCSPTTH GSFRCR HR+S M RGGSVGSNLS+LARK  A  DSL
Subjt:  LPEYDMEELKKTPHLLLSPTALSRITKS-----NCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein2.7e-0656.76Show/hide
Query:  ITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNL
        ITK+ C+CSPTTH GSF+C+ HRT ++ R  SV +N+
Subjt:  ITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNL

AT1G67910.1 unknown protein3.5e-0663.64Show/hide
Query:  ITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSV
        +TK+NCLCSPTTH GSFRCR HR+ ++ R  S+
Subjt:  ITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSV

AT1G67910.2 unknown protein3.5e-0663.64Show/hide
Query:  ITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSV
        +TK+NCLCSPTTH GSFRCR HR+ ++ R  S+
Subjt:  ITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSV

AT3G13227.1 serine-rich protein-related3.2e-0760.87Show/hide
Query:  SRITKSNCLCSPTTHIGSFRCRRHRTST---MTRGGSVGSNLSDLA
        S   + NCLC+PTTH GSFRCR HR +    M+RG SV SNLS LA
Subjt:  SRITKSNCLCSPTTHIGSFRCRRHRTST---MTRGGSVGSNLSDLA

AT5G55980.1 serine-rich protein-related3.7e-1152.31Show/hide
Query:  TPHLLLSPTALSRITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSD-LARKSEAAGDSL
        +P L    ++  + T+ NCLCSPTTH GSFRCR HR  ++TR GS+GSNL+  L+ KS    DSL
Subjt:  TPHLLLSPTALSRITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSD-LARKSEAAGDSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCATTGCCGGAATACGACATGGAAGAGTTGAAGAAAACCCCACATTTGTTGTTGTCACCAACAGCCTTATCTCGCATCACAAAATCCAACTGTTTGTGCTCTCC
GACCACCCATATTGGATCTTTCAGGTGTCGGCGTCACCGGACCTCCACCATGACTCGTGGCGGCTCCGTCGGCTCCAATCTCTCTGATTTGGCTCGCAAGTCTGAGGCTG
CCGGTGACTCGTTATTTTCTCTTCTTCATCTTCATCTTCATCTTCTTTCTTTTGAATGGTTGTATGAATTACAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCATTGCCGGAATACGACATGGAAGAGTTGAAGAAAACCCCACATTTGTTGTTGTCACCAACAGCCTTATCTCGCATCACAAAATCCAACTGTTTGTGCTCTCC
GACCACCCATATTGGATCTTTCAGGTGTCGGCGTCACCGGACCTCCACCATGACTCGTGGCGGCTCCGTCGGCTCCAATCTCTCTGATTTGGCTCGCAAGTCTGAGGCTG
CCGGTGACTCGTTATTTTCTCTTCTTCATCTTCATCTTCATCTTCTTTCTTTTGAATGGTTGTATGAATTACAAGTTTGA
Protein sequenceShow/hide protein sequence
MGALPEYDMEELKKTPHLLLSPTALSRITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSLFSLLHLHLHLLSFEWLYELQV