CuGenDBv2

Gene ID	Clc10G04740
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Maturase
Genome location	ClcChr10:5243467..5244165
RNA-Seq Expression	Clc10G04740
Synteny	Clc10G04740
Gene Ontology terms	GO:0000959 - mitochondrial RNA metabolic process (biological process) GO:0006259 - DNA metabolic process (biological process) GO:0006397 - mRNA processing (biological process) GO:0005737 - cytoplasm (cellular component) GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

AMC32911.1 MatR [Ceanothus herbaceus]

3.0e-60

60.61

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Query:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP
        MS+TGSLLDGVQLAETLGTAGVR PQVSVLWGTVKHIRQGSRG+SLLHSSGRSNAPSDVQQAVSRSGMS RKLSLYTPAGRKAAGEGGGHWAGSISSEFP
Subjt:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP

Query:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR
        I +EAPIKKILRRLRDRG ++                                                         FT +            + S   
Subjt:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR

Query:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPNH
        + VNQEG +T AEFPNSIELGKLGPGQDPN+
Subjt:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPNH

GFS28709.1 hypothetical protein Acr_00g0003450 [Actinidia rufa]

1.6e-61

71.5

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Query:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP
        MS TGSLLD VQLAETLGTAGV SPQVSVLWGTVKHIRQGSRG+SLLHSSGRS  PSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWA SISSEFP
Subjt:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP

Query:  IHLEAPIKKILRRLRDRG------------------AVTTFTKS-----------ERLSTTRSAVNQEGAQTEAEFPNSIELGKLGPGQDPNH
        I +EAPIKKILRRLRDRG                      FT +           ++ S   S VNQEG +T AEFPNSIELGKLGPGQDPN+
Subjt:  IHLEAPIKKILRRLRDRG------------------AVTTFTKS-----------ERLSTTRSAVNQEGAQTEAEFPNSIELGKLGPGQDPNH

XP_022970633.1 uncharacterized protein LOC111469563 [Cucurbita maxima]

7.9e-61

61.64

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Query:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP
        MSQTGSLLDGVQLAETLGTAGV  PQVSVLWGTVKHIRQ SRG+SLLHSSGRS APSDVQQAVSRSGMSA KLSLYTPAGRKAAGE GGHWAGSISSEFP
Subjt:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP

Query:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR
        IHLEAPIKKILRRLRDRG ++                                                         FT +            + S   
Subjt:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR

Query:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPNHY
        + VNQEG QTEAEFPNSIELGKLGPGQDPNHY
Subjt:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPNHY

YP_003587246.1 maturase, partial [Citrullus lanatus]

1.1e-65

64.22

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Query:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP
        MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRG+SLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP
Subjt:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP

Query:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR
        IHLEAPIKKILRRLRDRG ++                                                         FT +            + S   
Subjt:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR

Query:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPNHY
        + VNQEG QTEAEFPNSIELGKLGPGQDPNHY
Subjt:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPNHY

YP_009913627.1 maturase [Luffa acutangula]

1.5e-64

63.36

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Query:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP
        MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRG+SLLHSSGRSNAPSDVQQAVSRSGMS RKLSLYTPAGRKAAGEGGGHWAGSISSEFP
Subjt:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP

Query:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR
        IHLEAPIKKILRRLRDRG ++                                                         FT +            + S   
Subjt:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR

Query:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPNHY
        + VNQEG QTEAEFPNSIELGKLGP QDPNHY
Subjt:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPNHY

TrEMBL top hits

e value

%identity

Alignment

A0A0Y0URN6 MatR

1.5e-60

60.61

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Query:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP
        MS+TGSLLDGVQLAETLGTAGVR PQVSVLWGTVKHIRQGSRG+SLLHSSGRSNAPSDVQQAVSRSGMS RKLSLYTPAGRKAAGEGGGHWAGSISSEFP
Subjt:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP

Query:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR
        I +EAPIKKILRRLRDRG ++                                                         FT +            + S   
Subjt:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR

Query:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPNH
        + VNQEG +T AEFPNSIELGKLGPGQDPN+
Subjt:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPNH

A0A6J1I4G9 uncharacterized protein LOC111469563

3.8e-61

61.64

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Query:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP
        MSQTGSLLDGVQLAETLGTAGV  PQVSVLWGTVKHIRQ SRG+SLLHSSGRS APSDVQQAVSRSGMSA KLSLYTPAGRKAAGE GGHWAGSISSEFP
Subjt:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP

Query:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR
        IHLEAPIKKILRRLRDRG ++                                                         FT +            + S   
Subjt:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR

Query:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPNHY
        + VNQEG QTEAEFPNSIELGKLGPGQDPNHY
Subjt:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPNHY

A0A7D6C8J7 Maturase

7.4e-65

63.36

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Query:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP
        MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRG+SLLHSSGRSNAPSDVQQAVSRSGMS RKLSLYTPAGRKAAGEGGGHWAGSISSEFP
Subjt:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP

Query:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR
        IHLEAPIKKILRRLRDRG ++                                                         FT +            + S   
Subjt:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR

Query:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPNHY
        + VNQEG QTEAEFPNSIELGKLGP QDPNHY
Subjt:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPNHY

A0A7J0D8T5 Uncharacterized protein

7.7e-62

71.5

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Query:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP
        MS TGSLLD VQLAETLGTAGV SPQVSVLWGTVKHIRQGSRG+SLLHSSGRS  PSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWA SISSEFP
Subjt:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP

Query:  IHLEAPIKKILRRLRDRG------------------AVTTFTKS-----------ERLSTTRSAVNQEGAQTEAEFPNSIELGKLGPGQDPNH
        I +EAPIKKILRRLRDRG                      FT +           ++ S   S VNQEG +T AEFPNSIELGKLGPGQDPN+
Subjt:  IHLEAPIKKILRRLRDRG------------------AVTTFTKS-----------ERLSTTRSAVNQEGAQTEAEFPNSIELGKLGPGQDPNH

D5I3B6 Maturase (Fragment)

5.1e-66

64.22

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Query:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP
        MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRG+SLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP
Subjt:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP

Query:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR
        IHLEAPIKKILRRLRDRG ++                                                         FT +            + S   
Subjt:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR

Query:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPNHY
        + VNQEG QTEAEFPNSIELGKLGPGQDPNHY
Subjt:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPNHY

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

ATMG00520.1 Intron maturase, type II family protein

1.3e-58

57.83

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Query:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP
        MS+TGSL DGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRG+S LHSSGRSNA SDVQQ VSRSG  ARKLSLYTP GRKAAGEGGGHWAGSISSEFP
Subjt:  MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFP

Query:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR
        I +EAPIKKILRRLRDRG ++                                                         FT +            + S   
Subjt:  IHLEAPIKKILRRLRDRGAVT--------------------------------------------------------TFTKSE-----------RLSTTR

Query:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPN
        + VNQEG +  AEFPNSIELGKLGPGQD N
Subjt:  SAVNQEGAQTEAEFPNSIELGKLGPGQDPN

Sequences

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CDS sequence

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ATGAGCCAAACAGGGAGTCTACTGGACGGGGTTCAACTAGCGGAGACTCTTGGAACTGCTGGAGTAAGAAGTCCCCAAGTGAGCGTATTATGGGGGACCGTTAAGCACAT
CCGGCAAGGATCAAGGGGGGTCTCGTTGTTGCATAGCTCAGGTCGTAGCAACGCACCATCGGACGTTCAACAGGCAGTTTCACGATCGGGCATGAGTGCCCGAAAGTTGT
CATTGTATACTCCCGCGGGTCGGAAGGCGGCGGGGGAAGGAGGAGGACACTGGGCGGGATCTATCAGCAGCGAATTCCCCATACATCTCGAGGCGCCTATCAAAAAGATA
CTTCGAAGGCTTCGGGATCGAGGTGCTGTGACAACCTTTACCAAGTCGGAACGATTGTCGACCACCAGATCCGCTGTCAATCAAGAAGGTGCTCAGACTGAAGCGGAGTT
CCCCAACAGCATAGAGCTTGGGAAGCTCGGACCCGGTCAAGATCCGAACCACTACTAG

mRNA sequence

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Protein sequence

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MSQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGVSLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKI
LRRLRDRGAVTTFTKSERLSTTRSAVNQEGAQTEAEFPNSIELGKLGPGQDPNHY

Clc10G04740 (gene) of Watermelon (cordophanus) v2 genome