; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G04840 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G04840
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionserine/arginine-rich splicing factor RS40-like
Genome locationClcChr10:5338637..5346885
RNA-Seq ExpressionClc10G04840
SyntenyClc10G04840
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650115.1 hypothetical protein Csa_009778 [Cucumis sativus]1.6e-18291.89Show/hide
Query:  VVYCFSNFSSGSMKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGG
        +++CFSNFSSGSMKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAI ALDRREFGRKGRRLRVEWTKQERGIRRP GGGGG 
Subjt:  VVYCFSNFSSGSMKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGG

Query:  GGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP---
        GGGSRRSSTNTRPSKTLFVINFDPYHTR RDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKRNGYSP   
Subjt:  GGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP---

Query:  -DRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPND
         DRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDY RGRSPKHSPYRRERERSSDH RAPSHSPPHQRERPND
Subjt:  -DRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPND

Query:  DRIPNRSRSPHGRERERRSPTDGRGTSYSPRDRER--SDNGHDQRQNTVAEPGESPSYGGTQSPKHQGYN
        DRIPNRS SP+ RERER SP  GRG SYSPRDRER   DNGHD ++NTVAEPGE PSY GTQSPKH+GYN
Subjt:  DRIPNRSRSPHGRERERRSPTDGRGTSYSPRDRER--SDNGHDQRQNTVAEPGESPSYGGTQSPKHQGYN

KAG6577485.1 Serine/arginine-rich splicing factor RS40, partial [Cucurbita argyrosperma subsp. sororia]2.9e-29365.29Show/hide
Query:  SMKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNT
        SMKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP  GGG GGG SRRSSTNT
Subjt:  SMKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNT

Query:  RPSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRS
        +PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKRNGYSP    DRSPDRKRRS
Subjt:  RPSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRS

Query:  PSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHS---------------------
        PSPYRRERGSPDYGNG+SRSPYR+ RASPDYGSRRSPSPYQR RERGSP+YGRGRSP  SPYRRERERSSDHARAPSHS                     
Subjt:  PSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHS---------------------

Query:  --PPHQRERPNDDRIPNRSRSPHGRERERRSPTDGRGTSYSPRDRERSDNGHDQRQNTVAEPGESPSYGGTQSPKHQGYNRTTTAVTVPASHSQPLRRIH
          PPHQRERPN DR  +   SP+G  RER SPTD R TSYSPRDRER+                                R+  A+          R +H
Subjt:  --PPHQRERPNDDRIPNRSRSPHGRERERRSPTDGRGTSYSPRDRERSDNGHDQRQNTVAEPGESPSYGGTQSPKHQGYNRTTTAVTVPASHSQPLRRIH

Query:  TALIDLRRQAHHLRRPAIHSRKRV--CYSSFCFETVCSMKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSVTHDPPRKFWIQRWQGNSAVGNSPKVE
              +R   +L+     SR R+   + S       SMKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKS                           
Subjt:  TALIDLRRQAHHLRRPAIHSRKRV--CYSSFCFETVCSMKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSVTHDPPRKFWIQRWQGNSAVGNSPKVE

Query:  VVLIAFRALQYDLASSGIWKPEKLTFVGFLMGGSKKLFEKRRAYFLNPKPPWPEFSLVQDFLRIFIILLDKDGSSELSVPPGTSFLFLFPRRFIPILNGT
                                                                                                            
Subjt:  VVLIAFRALQYDLASSGIWKPEKLTFVGFLMGGSKKLFEKRRAYFLNPKPPWPEFSLVQDFLRIFIILLDKDGSSELSVPPGTSFLFLFPRRFIPILNGT

Query:  TILHFPPTLRFPVSILHDFCMPTIHTLFQGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGVGGGGGGGGGSRRSSTNTRPSKT
                                     GFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPG  GGGGGGGGGSRRSSTNTRPSKT
Subjt:  TILHFPPTLRFPVSILHDFCMPTIHTLFQGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGVGGGGGGGGGSRRSSTNTRPSKT

Query:  LFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDDKRNGYSPDRNRDRSPDRRRRSPSPYR
        LFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDD+KRNG+SPDRNRDRSPDR+RRSPSPY+
Subjt:  LFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDDKRNGYSPDRNRDRSPDRRRRSPSPYR

Query:  RERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ--RERERGSPDY---------------------GRGRSPNHSPYRRERERSSDHVRAPSHSPSH
        RERGSPDYGNGI+RSPYRRQRASPDYGSRRSPSPYQ  RERERGSPDY                     GRGRSPN SPYRRERERSSDH RAPSHSP H
Subjt:  RERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ--RERERGSPDY---------------------GRGRSPNHSPYRRERERSSDHVRAPSHSPSH

Query:  QRERPNDDRVHNRSPSPYGRERGSP-TDGRGTSYSPRDRERS
        QRERPNDDRV NRS SPYGRERGSP TDGRGTSYSPRDRER+
Subjt:  QRERPNDDRVHNRSPSPYGRERGSP-TDGRGTSYSPRDRERS

XP_011650502.1 serine/arginine-rich splicing factor RS40 isoform X1 [Cucumis sativus]1.7e-17692.46Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAI ALDRREFGRKGRRLRVEWTKQERGIRRP GGGGG GGGSRRSSTNTR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP
        PSKTLFVINFDPYHTR RDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKRNGYSP    DRSPDRKRRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP

Query:  SPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPHG
        SPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDY RGRSPKHSPYRRERERSSDH RAPSHSPPHQRERPNDDRIPNRS SP+ 
Subjt:  SPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPHG

Query:  RERERRSPTDGRGTSYSPRDRER--SDNGHDQRQNTVAEPGESPSYGGTQSPKHQGYN
        RERER SP  GRG SYSPRDRER   DNGHD ++NTVAEPGE PSY GTQSPKH+GYN
Subjt:  RERERRSPTDGRGTSYSPRDRER--SDNGHDQRQNTVAEPGESPSYGGTQSPKHQGYN

XP_011650503.1 serine/arginine-rich splicing factor RS40 isoform X2 [Cucumis sativus]1.7e-17692.46Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAI ALDRREFGRKGRRLRVEWTKQERGIRRP GGGGG GGGSRRSSTNTR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP
        PSKTLFVINFDPYHTR RDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKRNGYSP    DRSPDRKRRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP

Query:  SPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPHG
        SPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDY RGRSPKHSPYRRERERSSDH RAPSHSPPHQRERPNDDRIPNRS SP+ 
Subjt:  SPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPHG

Query:  RERERRSPTDGRGTSYSPRDRER--SDNGHDQRQNTVAEPGESPSYGGTQSPKHQGYN
        RERER SP  GRG SYSPRDRER   DNGHD ++NTVAEPGE PSY GTQSPKH+GYN
Subjt:  RERERRSPTDGRGTSYSPRDRER--SDNGHDQRQNTVAEPGESPSYGGTQSPKHQGYN

XP_038904888.1 serine/arginine-rich splicing factor RS40-like isoform X1 [Benincasa hispida]4.8e-17969.02Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSVTHDPPRKFWIQRWQGNSAVGNSPKVEVVLIAFRALQYDLASSGIWKPEKLTFVGFLMGGSKKLF
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKS                                                                 
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSVTHDPPRKFWIQRWQGNSAVGNSPKVEVVLIAFRALQYDLASSGIWKPEKLTFVGFLMGGSKKLF

Query:  EKRRAYFLNPKPPWPEFSLVQDFLRIFIILLDKDGSSELSVPPGTSFLFLFPRRFIPILNGTTILHFPPTLRFPVSILHDFCMPTIHTLFQGFAFIYMED
                                                                                                   GFAFIYMED
Subjt:  EKRRAYFLNPKPPWPEFSLVQDFLRIFIILLDKDGSSELSVPPGTSFLFLFPRRFIPILNGTTILHFPPTLRFPVSILHDFCMPTIHTLFQGFAFIYMED

Query:  ERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGVGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFV
        ERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGVGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFV
Subjt:  ERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGVGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFV

Query:  QYELQEDATRALELTNMSKLMDRVISVEYAVRDDDDKRNGYSPDRNRDRSPDRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRE
        QYELQEDATRALELTNMSKLMDRVISVEYAVRDDDDKRNGYSPDRNRDRSPDR+RRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRE
Subjt:  QYELQEDATRALELTNMSKLMDRVISVEYAVRDDDDKRNGYSPDRNRDRSPDRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRE

Query:  RERGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPSHQRERPNDDRVHNRSPSPYGRERGSPTDGRGTSYSPRDRERSPNPDNGHDQQQNTVAEPGES
        RERGSPDYGRGRSPNHSPYRRERERSSD VRAPSHSP HQRERPNDDRVHNRSPSPYGRERGSPTDGRGTSYSPRDRERS NPDNGHDQQQNTV EPGES
Subjt:  RERGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPSHQRERPNDDRVHNRSPSPYGRERGSPTDGRGTSYSPRDRERSPNPDNGHDQQQNTVAEPGES

Query:  PSYGGTQSPKHRVYGSRSPQAEE
        PSYGGTQSPKHR YGSRSPQAEE
Subjt:  PSYGGTQSPKHRVYGSRSPQAEE

TrEMBL top hitse value%identityAlignment
A0A0A0L7I3 Uncharacterized protein8.3e-17792.46Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAI ALDRREFGRKGRRLRVEWTKQERGIRRP GGGGG GGGSRRSSTNTR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP
        PSKTLFVINFDPYHTR RDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKRNGYSP    DRSPDRKRRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP

Query:  SPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPHG
        SPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDY RGRSPKHSPYRRERERSSDH RAPSHSPPHQRERPNDDRIPNRS SP+ 
Subjt:  SPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPHG

Query:  RERERRSPTDGRGTSYSPRDRER--SDNGHDQRQNTVAEPGESPSYGGTQSPKHQGYN
        RERER SP  GRG SYSPRDRER   DNGHD ++NTVAEPGE PSY GTQSPKH+GYN
Subjt:  RERERRSPTDGRGTSYSPRDRER--SDNGHDQRQNTVAEPGESPSYGGTQSPKHQGYN

A0A1S3BL99 serine/arginine-rich splicing factor RS40-like isoform X12.7e-17592.2Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAI ALDRREFGRKGRRLRVEWTKQERGIRRP GGGGG GGGSRRSS+NTR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP
        PSKTLFVINFDPYHTR RDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKRNGYSP    DRSPDRKRRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP

Query:  SPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPHG
        SPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDH RAPS SP HQRERPN DRIPNRS SP+ 
Subjt:  SPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPHG

Query:  RERERRSP-TDGRGTSYSPRDRERS--DNGHDQRQNTVAEPGESPSYGGTQSPKHQGYN
        RERERRSP  DGRGTSYSPRDRERS  DNGHD ++NTVAEPGE PSY GTQSPKH+GYN
Subjt:  RERERRSP-TDGRGTSYSPRDRERS--DNGHDQRQNTVAEPGESPSYGGTQSPKHQGYN

A0A1S3BLX3 serine/arginine-rich splicing factor RS40-like isoform X22.7e-17592.2Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAI ALDRREFGRKGRRLRVEWTKQERGIRRP GGGGG GGGSRRSS+NTR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP
        PSKTLFVINFDPYHTR RDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKRNGYSP    DRSPDRKRRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP

Query:  SPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPHG
        SPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDH RAPS SP HQRERPN DRIPNRS SP+ 
Subjt:  SPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPHG

Query:  RERERRSP-TDGRGTSYSPRDRERS--DNGHDQRQNTVAEPGESPSYGGTQSPKHQGYN
        RERERRSP  DGRGTSYSPRDRERS  DNGHD ++NTVAEPGE PSY GTQSPKH+GYN
Subjt:  RERERRSP-TDGRGTSYSPRDRERS--DNGHDQRQNTVAEPGESPSYGGTQSPKHQGYN

A0A1S4DXA1 serine/arginine-rich splicing factor RS40-like isoform X12.3e-17489.46Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP------GGGGGGGGGGSRR
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDER+AEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP      GGGGGGGGGGSRR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP------GGGGGGGGGGSRR

Query:  SSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPD
        SSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD+KRNGYSP    DRSPD
Subjt:  SSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPD

Query:  RKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHAR-APSHSPPHQRERPNDDRIPN
        RKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSP HSPYRRERERSSDH R APS+ P HQRERPNDDR+PN
Subjt:  RKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHAR-APSHSPPHQRERPNDDRIPN

Query:  RSRSPHGRERERRSPTDGRGTSYSPRDRERS-------DNGHDQRQNTVAEPGESPSYGGTQSPKHQGYN
        RS SP+GRERE+ SPTDGRGTSYSPRDRERS       D+GHDQ+QN V EPGESP+YG TQSPKH+GY+
Subjt:  RSRSPHGRERERRSPTDGRGTSYSPRDRERS-------DNGHDQRQNTVAEPGESPSYGGTQSPKHQGYN

A0A5A7VJB8 Serine/arginine-rich splicing factor RS40-like isoform X12.3e-17489.46Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP------GGGGGGGGGGSRR
        MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDER+AEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP      GGGGGGGGGGSRR
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP------GGGGGGGGGGSRR

Query:  SSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPD
        SSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD+KRNGYSP    DRSPD
Subjt:  SSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPD

Query:  RKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHAR-APSHSPPHQRERPNDDRIPN
        RKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSP HSPYRRERERSSDH R APS+ P HQRERPNDDR+PN
Subjt:  RKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHAR-APSHSPPHQRERPNDDRIPN

Query:  RSRSPHGRERERRSPTDGRGTSYSPRDRERS-------DNGHDQRQNTVAEPGESPSYGGTQSPKHQGYN
        RS SP+GRERE+ SPTDGRGTSYSPRDRERS       D+GHDQ+QN V EPGESP+YG TQSPKH+GY+
Subjt:  RSRSPHGRERERRSPTDGRGTSYSPRDRERS-------DNGHDQRQNTVAEPGESPSYGGTQSPKHQGYN

SwissProt top hitse value%identityAlignment
O22315 Serine/arginine-rich-splicing factor SR341.1e-1331.23Show/hide
Query:  SSGSMKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMK-----SGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEW-------TKQERGIRRPGGG
        SS S + ++ GN   D R+ ++E LFS+YG V ++D+K      G+AF+  +D R+AEDAI   D  +F   G RLRVE        +   RG    GG 
Subjt:  SSGSMKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMK-----SGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEW-------TKQERGIRRPGGG

Query:  GGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRN----FAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKR
        GGG G G   S   +R S+   ++   P     +DL+ H    G +   ++ R+       V Y   ED   AL+  + ++  +   +    VR+ D ++
Subjt:  GGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRN----FAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKR

Query:  NGYSPDRSPD-RKRRSPSPYRRERGSPDYGNGISRSP-YRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQ
        +  SP R     K RS S  R    S       SRSP  +  R SP   + RSP P  + R   SP   R RS    P  ++    S    +P+ SP H 
Subjt:  NGYSPDRSPD-RKRRSPSPYRRERGSPDYGNGISRSP-YRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQ

Query:  R
        R
Subjt:  R

P92964 Serine/arginine-rich splicing factor RS311.2e-6854.18Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        M+P+F GNFEY+ RQ DLERLF +YG+VDRVDMKSG+AF+Y EDER+AEDAIR LD   FG + RRL VEW K ERG  R          G  ++ +N +
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEK--RNGYSPDRSPDRKRRSPSP
        P+KTLFVINFDP  T+  D+E+HF+PYGK+ NVRIRRNF+FVQ+E QEDAT+ALE T  SK++DRV+SVEYA++DDDE+  RNG    RSP   RRS SP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEK--RNGYSPDRSPDRKRRSPSP

Query:  YRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPHGR
          R R SPDYG     SP + +R SPDYG  RSP   + +R +G   Y R RSP +        RSSD+ R  S         P  DR  +RS  P GR
Subjt:  YRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPHGR

P92965 Serine/arginine-rich splicing factor RS401.9e-10162.11Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAIRALDR EFGRKGRRLRVEWTK ER      GG    GGGSRRSS++ R
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP
        PSKTLFVINFD  +TRTRDLE+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP    DRSP+R+RRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP

Query:  SPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPH
        SPY+RERGSPDYG G S  + YR++R SPDYG RRSPSPY++ R RGSP+YGR R    SP RRER  S       S SP ++RER + +  P +  SP 
Subjt:  SPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPH

Query:  GRERERRSPTDGRGTSYSPRDRERSDNGHDQRQNTVAEPGESPSYGGTQSP
            E  SP + R      R R   +NG  +   ++        Y G +SP
Subjt:  GRERERRSPTDGRGTSYSPRDRERSDNGHDQRQNTVAEPGESPSYGGTQSP

P92966 Serine/arginine-rich splicing factor RS411.5e-9860.33Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAIRALDR E+GR GRRLRVEWTK +R       GG G  GGSRRSS+  R
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP
        PSKTLFVINFD  +TRTRDLERHF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYSP    DRSPDR+RRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP

Query:  SPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDY---GRGRSPKHSPYR-RERERSSDHARAPSHSPPHQRERPNDDRIPNRS
        SPYRRERGSPDYG G S   ++R+R SPDYG  RRSPSPY+R R   SPDY    R R    SP     R RS    R  S SPP     P + R  +RS
Subjt:  SPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDY---GRGRSPKHSPYR-RERERSSDHARAPSHSPPHQRERPNDDRIPNRS

Query:  RSPHGRERERRSPTDGRGTSYSPRDRERS--DNGHDQRQNTVAEPGESPSYGGTQSPKHQGYNRTTTA
          P+ + RE RSP          R R +S  +NG  +    + E      Y G  SP  +  +R+  A
Subjt:  RSPHGRERERRSPTDGRGTSYSPRDRERS--DNGHDQRQNTVAEPGESPSYGGTQSPKHQGYNRTTTA

Q9ZPX8 Serine/arginine-rich splicing factor RS31A7.0e-6451.42Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIR-RPGGGGGGGGGGSRRSSTNT
        M+ ++ GNF+YD R  DLERLFS++G+V RVDMKSG+AF+Y EDER+AEDAIR  D   FG   R+L VEW K  +G R +P  G         ++ +N 
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIR-RPGGGGGGGGGGSRRSSTNT

Query:  RPSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRSPDRKRRSPSPY
        RP+KTLFVINFDP  TR RD+ERHF+PYGK+LNVR+RRNFAFVQ+  QEDAT+AL+ T+ SKL+D+V+SVEYA+R+  E+ + Y    +  R+RRSPSP 
Subjt:  RPSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRSPDRKRRSPSPY

Query:  RRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRER
         R R SPDY           +R SP+Y   + P+PY+R   R SPDYGR              RSSD+ RA + SP + R R
Subjt:  RRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRER

Arabidopsis top hitse value%identityAlignment
AT4G25500.1 arginine/serine-rich splicing factor 351.3e-10262.11Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAIRALDR EFGRKGRRLRVEWTK ER      GG    GGGSRRSS++ R
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP
        PSKTLFVINFD  +TRTRDLE+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP    DRSP+R+RRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP

Query:  SPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPH
        SPY+RERGSPDYG G S  + YR++R SPDYG RRSPSPY++ R RGSP+YGR R    SP RRER  S       S SP ++RER + +  P +  SP 
Subjt:  SPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPH

Query:  GRERERRSPTDGRGTSYSPRDRERSDNGHDQRQNTVAEPGESPSYGGTQSP
            E  SP + R      R R   +NG  +   ++        Y G +SP
Subjt:  GRERERRSPTDGRGTSYSPRDRERSDNGHDQRQNTVAEPGESPSYGGTQSP

AT4G25500.3 arginine/serine-rich splicing factor 351.8e-9160.83Show/hide
Query:  QGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGVGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILS
        QGFAF+YMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ER        GG    GGGSRRSS++ RPSKTLFVINFD  +TRTRDLE+HF+PYGKI++
Subjt:  QGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGVGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILS

Query:  VRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDDKRNGYSPDRNRDRSPDRRRRSPSPYRRERGSPDYGNGISR-SPYRRQRASPDYG
        VRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+RRRRSPSPY+RERGSPDYG G S  + YR++R SPDYG
Subjt:  VRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDDKRNGYSPDRNRDRSPDRRRRSPSPYRRERGSPDYGNGISR-SPYRRQRASPDYG

Query:  SRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPSHQRERPNDDRVHNRSPSPYGRERGSPTDGRGTSYSP---RDRERSPNPDNG
         RRSPSPY++ R RGSP+YGR R  N SP RRER  S       S SP+++RER + +       SP+ +E  SP +G G   SP   R+R RS +P+NG
Subjt:  SRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPSHQRERPNDDRVHNRSPSPYGRERGSPTDGRGTSYSP---RDRERSPNPDNG

Query:  HDQQQNTVAEPGESPSYGGTQSPKHRVYGSRSPQAEE
          +   ++        Y G +SP  +    RSP A+E
Subjt:  HDQQQNTVAEPGESPSYGGTQSPKHRVYGSRSPQAEE

AT4G25500.4 arginine/serine-rich splicing factor 351.3e-10262.11Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAIRALDR EFGRKGRRLRVEWTK ER      GG    GGGSRRSS++ R
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP
        PSKTLFVINFD  +TRTRDLE+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP    DRSP+R+RRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP

Query:  SPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPH
        SPY+RERGSPDYG G S  + YR++R SPDYG RRSPSPY++ R RGSP+YGR R    SP RRER  S       S SP ++RER + +  P +  SP 
Subjt:  SPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPH

Query:  GRERERRSPTDGRGTSYSPRDRERSDNGHDQRQNTVAEPGESPSYGGTQSP
            E  SP + R      R R   +NG  +   ++        Y G +SP
Subjt:  GRERERRSPTDGRGTSYSPRDRERSDNGHDQRQNTVAEPGESPSYGGTQSP

AT5G52040.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-9960.33Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAIRALDR E+GR GRRLRVEWTK +R       GG G  GGSRRSS+  R
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP
        PSKTLFVINFD  +TRTRDLERHF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYSP    DRSPDR+RRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP

Query:  SPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDY---GRGRSPKHSPYR-RERERSSDHARAPSHSPPHQRERPNDDRIPNRS
        SPYRRERGSPDYG G S   ++R+R SPDYG  RRSPSPY+R R   SPDY    R R    SP     R RS    R  S SPP     P + R  +RS
Subjt:  SPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDY---GRGRSPKHSPYR-RERERSSDHARAPSHSPPHQRERPNDDRIPNRS

Query:  RSPHGRERERRSPTDGRGTSYSPRDRERS--DNGHDQRQNTVAEPGESPSYGGTQSPKHQGYNRTTTA
          P+ + RE RSP          R R +S  +NG  +    + E      Y G  SP  +  +R+  A
Subjt:  RSPHGRERERRSPTDGRGTSYSPRDRERS--DNGHDQRQNTVAEPGESPSYGGTQSPKHQGYNRTTTA

AT5G52040.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-9961.62Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAIRALDR E+GR GRRLRVEWTK +R       GG G  GGSRRSS+  R
Subjt:  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTR

Query:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP
        PSKTLFVINFD  +TRTRDLERHF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYSP    DRSPDR+RRSP
Subjt:  PSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSP----DRSPDRKRRSP

Query:  SPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDY---GRGRSPKHSPYR-RERERSSDHARAPSHSPPHQRERPNDDRIPNRS
        SPYRRERGSPDYG G S   ++R+R SPDYG  RRSPSPY+R R   SPDY    R R    SP     R RS    R  S SPP     P + R  +RS
Subjt:  SPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPSPYQRERERGSPDY---GRGRSPKHSPYR-RERERSSDHARAPSHSPPHQRERPNDDRIPNRS

Query:  RSPHGRERERRSPTDGRGTSYSPRDRERS--DNGHDQRQNTVAEPGESPSYGGTQSP
          P+ + RE RSP          R R +S  +NG  +    + E      Y G  SP
Subjt:  RSPHGRERERRSPTDGRGTSYSPRDRERS--DNGHDQRQNTVAEPGESPSYGGTQSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAGTGTCGTGTATTGTTTTTCCAATTTTTCTTCAGGAAGTATGAAGCCAATTTTTTGTGGAAACTTCGAGTATGATGCTCGGCAGCCTGATCTGGAAAGACTTTT
TAGTCGATATGGAAAAGTTGATAGAGTAGATATGAAATCCGGGTTTGCTTTTATCTACATGGAGGATGAGAGAGAGGCTGAGGATGCTATCCGTGCACTCGATCGGAGAG
AATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGACCTGGTGGAGGTGGAGGTGGAGGTGGAGGTGGTTCGAGGAGATCC
TCTACTAATACAAGACCTTCAAAGACTTTATTTGTTATTAACTTTGATCCATATCATACTAGGACAAGGGATTTGGAGAGGCACTTCGATCCCTATGGTAAGATATTGAA
TGTAAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTAGAGCATTAGAGCTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCTG
TGGAATATGCTGTTCGAGATGACGACGAGAAAAGAAATGGATATAGTCCAGATAGGTCTCCTGATAGAAAACGGCGATCCCCAAGTCCTTATAGAAGAGAGCGAGGAAGC
CCTGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGACAAAGGGCTAGTCCTGATTATGGAAGTCGTCGTAGTCCAAGTCCTTATCAGAGAGAGAGGGAGAGGGG
TTCACCTGATTATGGCCGTGGTCGTAGTCCCAAGCATAGTCCTTATAGGAGGGAGAGAGAAAGATCAAGTGACCATGCTAGGGCTCCTAGCCACAGTCCTCCCCATCAGA
GGGAAAGACCAAATGATGACCGAATCCCCAACCGAAGTCGTAGTCCTCATGGGAGAGAGAGGGAGAGGAGGAGTCCTACCGATGGACGTGGCACTAGCTATAGTCCTCGT
GATAGAGAGAGGTCAGACAATGGTCATGATCAGCGGCAGAATACAGTAGCCGAACCCGGTGAGAGCCCCAGTTATGGTGGCACTCAGAGCCCAAAGCATCAGGGATATAA
CAGGACAACAACCGCAGTCACGGTACCTGCCTCTCACTCTCAGCCTCTCCGGCGAATCCACACTGCGTTAATCGATCTCCGACGGCAGGCACACCATCTACGGCGGCCTG
CAATTCACAGCCGAAAAAGAGTTTGCTACTCTTCGTTTTGTTTTGAAACGGTATGTAGTATGAAGCCGATTTTTTGTGGAAACTTTGAGTATGATGCTCGACAGCCTGAT
TTGGAAAGACTGTTTAGTCGATATGGAAAAGTTGATAGAGTTGATATGAAATCTGTTACTCACGACCCACCAAGAAAGTTTTGGATACAACGTTGGCAAGGCAATTCAGC
TGTTGGAAATTCCCCCAAAGTAGAGGTCGTTCTCATCGCATTTCGTGCCTTGCAGTACGATTTGGCATCATCCGGCATATGGAAGCCAGAGAAGCTGACTTTTGTTGGAT
TTTTGATGGGGGGTTCTAAAAAATTATTTGAGAAAAGAAGAGCGTATTTTTTAAATCCTAAACCACCTTGGCCAGAATTTTCTTTGGTGCAGGATTTTCTTCGCATATTC
ATAATCCTCTTGGATAAAGATGGCTCTTCAGAATTGAGTGTTCCGCCTGGGACAAGCTTCCTCTTCTTGTTTCCAAGAAGATTCATACCGATCCTCAATGGCACCACCAT
CTTACATTTTCCTCCGACACTTCGCTTTCCAGTTTCCATTCTTCATGACTTTTGCATGCCTACAATCCATACATTGTTTCAAGGTTTTGCTTTTATCTATATGGAGGATG
AGAGAGATGCTGAGGATGCCATCCGTGCGCTTGATCGGAGAGAATTTGGCCGAAAAGGCCGCAGACTGCGCGTTGAGTGGACCAAACAAGAGCGTGGGATTAGAAGACCA
GGTGGTGTTGGAGGTGGAGGAGGAGGTGGAGGAGGTTCAAGGAGATCCTCTACTAATACAAGACCTTCGAAGACATTGTTTGTTATCAACTTTGACCCATATCATACTAG
GACAAGGGATTTGGAGAGGCACTTCGATCCTTATGGTAAGATATTGAGTGTAAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAATTGCAGGAGGATGCCACTAGAG
CATTGGAGCTGACAAACATGAGCAAATTGATGGATCGAGTGATTTCAGTAGAATATGCTGTTCGAGATGATGATGATAAGAGAAATGGATATAGTCCTGATAGGAATCGT
GATAGGTCTCCTGATAGAAGACGGCGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGCCCTGATTATGGCAATGGTATCAGCCGCAGTCCATACAGGAGACAAAGGGC
CAGTCCTGATTATGGAAGTCGTCGTAGTCCAAGCCCTTATCAGAGAGAGAGGGAGAGGGGTTCTCCTGATTATGGCCGTGGTCGTAGTCCCAATCATAGTCCTTATAGGA
GGGAGAGAGAGAGATCTAGTGACCATGTTAGGGCCCCTAGCCATAGTCCTTCGCATCAGAGGGAAAGACCAAATGATGACCGGGTCCACAACCGAAGTCCTAGTCCTTAT
GGGAGAGAGAGGGGCAGTCCTACAGATGGACGTGGCACTAGCTATAGTCCTCGTGATAGAGAGAGGTCGCCAAACCCTGACAATGGTCATGATCAGCAGCAGAATACAGT
AGCTGAACCTGGTGAGAGCCCCAGTTATGGTGGCACTCAGAGCCCAAAGCATCGGGTATACGGCAGCCGTTCGCCTCAAGCAGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAAGTGTCGTGTATTGTTTTTCCAATTTTTCTTCAGGAAGTATGAAGCCAATTTTTTGTGGAAACTTCGAGTATGATGCTCGGCAGCCTGATCTGGAAAGACTTTT
TAGTCGATATGGAAAAGTTGATAGAGTAGATATGAAATCCGGGTTTGCTTTTATCTACATGGAGGATGAGAGAGAGGCTGAGGATGCTATCCGTGCACTCGATCGGAGAG
AATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGACCTGGTGGAGGTGGAGGTGGAGGTGGAGGTGGTTCGAGGAGATCC
TCTACTAATACAAGACCTTCAAAGACTTTATTTGTTATTAACTTTGATCCATATCATACTAGGACAAGGGATTTGGAGAGGCACTTCGATCCCTATGGTAAGATATTGAA
TGTAAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTAGAGCATTAGAGCTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCTG
TGGAATATGCTGTTCGAGATGACGACGAGAAAAGAAATGGATATAGTCCAGATAGGTCTCCTGATAGAAAACGGCGATCCCCAAGTCCTTATAGAAGAGAGCGAGGAAGC
CCTGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGACAAAGGGCTAGTCCTGATTATGGAAGTCGTCGTAGTCCAAGTCCTTATCAGAGAGAGAGGGAGAGGGG
TTCACCTGATTATGGCCGTGGTCGTAGTCCCAAGCATAGTCCTTATAGGAGGGAGAGAGAAAGATCAAGTGACCATGCTAGGGCTCCTAGCCACAGTCCTCCCCATCAGA
GGGAAAGACCAAATGATGACCGAATCCCCAACCGAAGTCGTAGTCCTCATGGGAGAGAGAGGGAGAGGAGGAGTCCTACCGATGGACGTGGCACTAGCTATAGTCCTCGT
GATAGAGAGAGGTCAGACAATGGTCATGATCAGCGGCAGAATACAGTAGCCGAACCCGGTGAGAGCCCCAGTTATGGTGGCACTCAGAGCCCAAAGCATCAGGGATATAA
CAGGACAACAACCGCAGTCACGGTACCTGCCTCTCACTCTCAGCCTCTCCGGCGAATCCACACTGCGTTAATCGATCTCCGACGGCAGGCACACCATCTACGGCGGCCTG
CAATTCACAGCCGAAAAAGAGTTTGCTACTCTTCGTTTTGTTTTGAAACGGTATGTAGTATGAAGCCGATTTTTTGTGGAAACTTTGAGTATGATGCTCGACAGCCTGAT
TTGGAAAGACTGTTTAGTCGATATGGAAAAGTTGATAGAGTTGATATGAAATCTGTTACTCACGACCCACCAAGAAAGTTTTGGATACAACGTTGGCAAGGCAATTCAGC
TGTTGGAAATTCCCCCAAAGTAGAGGTCGTTCTCATCGCATTTCGTGCCTTGCAGTACGATTTGGCATCATCCGGCATATGGAAGCCAGAGAAGCTGACTTTTGTTGGAT
TTTTGATGGGGGGTTCTAAAAAATTATTTGAGAAAAGAAGAGCGTATTTTTTAAATCCTAAACCACCTTGGCCAGAATTTTCTTTGGTGCAGGATTTTCTTCGCATATTC
ATAATCCTCTTGGATAAAGATGGCTCTTCAGAATTGAGTGTTCCGCCTGGGACAAGCTTCCTCTTCTTGTTTCCAAGAAGATTCATACCGATCCTCAATGGCACCACCAT
CTTACATTTTCCTCCGACACTTCGCTTTCCAGTTTCCATTCTTCATGACTTTTGCATGCCTACAATCCATACATTGTTTCAAGGTTTTGCTTTTATCTATATGGAGGATG
AGAGAGATGCTGAGGATGCCATCCGTGCGCTTGATCGGAGAGAATTTGGCCGAAAAGGCCGCAGACTGCGCGTTGAGTGGACCAAACAAGAGCGTGGGATTAGAAGACCA
GGTGGTGTTGGAGGTGGAGGAGGAGGTGGAGGAGGTTCAAGGAGATCCTCTACTAATACAAGACCTTCGAAGACATTGTTTGTTATCAACTTTGACCCATATCATACTAG
GACAAGGGATTTGGAGAGGCACTTCGATCCTTATGGTAAGATATTGAGTGTAAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAATTGCAGGAGGATGCCACTAGAG
CATTGGAGCTGACAAACATGAGCAAATTGATGGATCGAGTGATTTCAGTAGAATATGCTGTTCGAGATGATGATGATAAGAGAAATGGATATAGTCCTGATAGGAATCGT
GATAGGTCTCCTGATAGAAGACGGCGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGCCCTGATTATGGCAATGGTATCAGCCGCAGTCCATACAGGAGACAAAGGGC
CAGTCCTGATTATGGAAGTCGTCGTAGTCCAAGCCCTTATCAGAGAGAGAGGGAGAGGGGTTCTCCTGATTATGGCCGTGGTCGTAGTCCCAATCATAGTCCTTATAGGA
GGGAGAGAGAGAGATCTAGTGACCATGTTAGGGCCCCTAGCCATAGTCCTTCGCATCAGAGGGAAAGACCAAATGATGACCGGGTCCACAACCGAAGTCCTAGTCCTTAT
GGGAGAGAGAGGGGCAGTCCTACAGATGGACGTGGCACTAGCTATAGTCCTCGTGATAGAGAGAGGTCGCCAAACCCTGACAATGGTCATGATCAGCAGCAGAATACAGT
AGCTGAACCTGGTGAGAGCCCCAGTTATGGTGGCACTCAGAGCCCAAAGCATCGGGTATACGGCAGCCGTTCGCCTCAAGCAGAGGAATGACGATCTAGAAATTGAGAAA
TGATGTTGATTTCAAACGGCTTCAGAATATTTTTAGTTGTATAATCGGTGTCAGTGGCGAACATGTATTCTATGGATAATGTTTGTGATTTCCAAATACATTTGTGCTTC
AGTTTCTAGGTATTCTATGCATATGCTTAAGGTAGGTTATTGTTTGGTTGAAGTTGGCCATTAAAATTCAGAGCACCCTGAATCCTCATCCATATTTGTAGGTTATTGTT
TCTGTAGGTTATTGTTTGCTTGAAGTAGTAGGTTTGGGCATGACCTTGATTGACAGAGGGTTAAAGAGTAAATAAGTTCAATCTGCCGTAGTCACTTATTTAGGATTTAA
TATCTAATGAGTTCCTTTGACTCCTAAATGTTGTAGAATTAGGC
Protein sequenceShow/hide protein sequence
MLSVVYCFSNFSSGSMKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRS
STNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRSPDRKRRSPSPYRRERGS
PDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHARAPSHSPPHQRERPNDDRIPNRSRSPHGRERERRSPTDGRGTSYSPR
DRERSDNGHDQRQNTVAEPGESPSYGGTQSPKHQGYNRTTTAVTVPASHSQPLRRIHTALIDLRRQAHHLRRPAIHSRKRVCYSSFCFETVCSMKPIFCGNFEYDARQPD
LERLFSRYGKVDRVDMKSVTHDPPRKFWIQRWQGNSAVGNSPKVEVVLIAFRALQYDLASSGIWKPEKLTFVGFLMGGSKKLFEKRRAYFLNPKPPWPEFSLVQDFLRIF
IILLDKDGSSELSVPPGTSFLFLFPRRFIPILNGTTILHFPPTLRFPVSILHDFCMPTIHTLFQGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRP
GGVGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDDKRNGYSPDRNR
DRSPDRRRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPSHQRERPNDDRVHNRSPSPY
GRERGSPTDGRGTSYSPRDRERSPNPDNGHDQQQNTVAEPGESPSYGGTQSPKHRVYGSRSPQAEE