; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G05150 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G05150
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSmall ubiquitin-related modifier
Genome locationClcChr10:5686900..5689769
RNA-Seq ExpressionClc10G05150
SyntenyClc10G05150
Gene Ontology termsGO:0016925 - protein sumoylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0031386 - protein tag (molecular function)
GO:0044389 - ubiquitin-like protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149348.1 small ubiquitin-related modifier 1 [Cucumis sativus]4.7e-4279.34Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGGG
        EELEMEDGDEIDAMLHQTGGG
Subjt:  EELEMEDGDEIDAMLHQTGGG

XP_018812104.1 small ubiquitin-related modifier 1 [Juglans regia]1.5e-4077.5Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGG
        +ELEMEDGDEIDAMLHQTGG
Subjt:  EELEMEDGDEIDAMLHQTGG

XP_022158763.1 small ubiquitin-related modifier 1-like [Momordica charantia]3.0e-4177.69Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIK+STQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGGG
        EELEMEDGDEIDAMLHQTGGG
Subjt:  EELEMEDGDEIDAMLHQTGGG

XP_023895256.1 small ubiquitin-related modifier 1 [Quercus suber]3.4e-4076.67Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVD++SIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGG
        +ELEMEDGDEIDAMLHQTGG
Subjt:  EELEMEDGDEIDAMLHQTGG

XP_038905908.1 small ubiquitin-related modifier 1 [Benincasa hispida]4.7e-4279.34Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGGG
        EELEMEDGDEIDAMLHQTGGG
Subjt:  EELEMEDGDEIDAMLHQTGGG

TrEMBL top hitse value%identityAlignment
A0A0A0L2Y3 Small ubiquitin-related modifier2.3e-4279.34Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGGG
        EELEMEDGDEIDAMLHQTGGG
Subjt:  EELEMEDGDEIDAMLHQTGGG

A0A1S3BKS1 Small ubiquitin-related modifier2.3e-4279.34Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGGG
        EELEMEDGDEIDAMLHQTGGG
Subjt:  EELEMEDGDEIDAMLHQTGGG

A0A2I4DY72 Small ubiquitin-related modifier7.3e-4177.5Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGG
        +ELEMEDGDEIDAMLHQTGG
Subjt:  EELEMEDGDEIDAMLHQTGG

A0A6A1VQH5 Small ubiquitin-related modifier7.3e-4177.5Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGG
        +ELEMEDGDEIDAMLHQTGG
Subjt:  EELEMEDGDEIDAMLHQTGG

A0A6J1DX09 Small ubiquitin-related modifier1.5e-4177.69Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIK+STQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGGG
        EELEMEDGDEIDAMLHQTGGG
Subjt:  EELEMEDGDEIDAMLHQTGGG

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt32.0e-1944.54Show/hide
Query:  SGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPE
        +G T+Q++ K  T+   HINLKV GQ                         D NEVFF+IK++T+  KLM  YC RQ   +NS+ FL DG R+R +QTP 
Subjt:  SGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPE

Query:  ELEMEDGDEIDAMLHQTGG
        EL+MEDGD+I+A+L Q GG
Subjt:  ELEMEDGDEIDAMLHQTGG

P55852 Small ubiquitin-related modifier 11.9e-3873.04Show/hide
Query:  NQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEM
        NQEEDKKP D  AHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTP+EL+M
Subjt:  NQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEM

Query:  EDGDEIDAMLHQTGG
        EDGDEIDAMLHQTGG
Subjt:  EDGDEIDAMLHQTGG

P55857 Small ubiquitin-related modifier 11.7e-3468.97Show/hide
Query:  EEDKKPT---DQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELE
        EEDKKP       AHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLFDGRRLR EQTP+ELE
Subjt:  EEDKKPT---DQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELE

Query:  MEDGDEIDAMLHQTGG
        MEDGDEIDAMLHQTGG
Subjt:  MEDGDEIDAMLHQTGG

Q9FLP5 Small ubiquitin-related modifier 31.0e-1542.11Show/hide
Query:  EDKKPTD--QSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEME
        +D KP D  Q AH+ LKVK Q                         DG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TP+EL+ME
Subjt:  EDKKPTD--QSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEME

Query:  DGDEIDAMLHQTGG
        DGD IDA    +GG
Subjt:  DGDEIDAMLHQTGG

Q9FLP6 Small ubiquitin-related modifier 21.2e-3774.56Show/hide
Query:  EEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMED
        EEDKKP DQ AHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMED
Subjt:  EEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMED

Query:  GDEIDAMLHQTGGG
        GDEIDAMLHQTGGG
Subjt:  GDEIDAMLHQTGGG

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 11.4e-3973.04Show/hide
Query:  NQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEM
        NQEEDKKP D  AHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTP+EL+M
Subjt:  NQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEM

Query:  EDGDEIDAMLHQTGG
        EDGDEIDAMLHQTGG
Subjt:  EDGDEIDAMLHQTGG

AT5G55160.1 small ubiquitin-like modifier 28.8e-3974.56Show/hide
Query:  EEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMED
        EEDKKP DQ AHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMED
Subjt:  EEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMED

Query:  GDEIDAMLHQTGGG
        GDEIDAMLHQTGGG
Subjt:  GDEIDAMLHQTGGG

AT5G55160.2 small ubiquitin-like modifier 22.7e-4076.32Show/hide
Query:  EEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMED
        EEDKKP DQ AHINLKVKGQ  +F ++  W            +  DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMED
Subjt:  EEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMED

Query:  GDEIDAMLHQTGGG
        GDEIDAMLHQTGGG
Subjt:  GDEIDAMLHQTGGG

AT5G55170.1 small ubiquitin-like modifier 37.3e-1742.11Show/hide
Query:  EDKKPTD--QSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEME
        +D KP D  Q AH+ LKVK Q                         DG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TP+EL+ME
Subjt:  EDKKPTD--QSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEME

Query:  DGDEIDAMLHQTGG
        DGD IDA    +GG
Subjt:  DGDEIDAMLHQTGG

AT5G55856.1 Ubiquitin-like superfamily protein3.6e-1640.54Show/hide
Query:  DKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGD
        DKKP   S+HI +KVK Q                         D   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R++  QTP EL +ED D
Subjt:  DKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGD

Query:  EIDAMLHQTGG
        EI+A   Q GG
Subjt:  EIDAMLHQTGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGCGTTACCAATCAAGAAGAGGACAAGAAGCCCACCGATCAGTCGGCTCATATCAACCTCAAAGTCAAGGGCCAGATGGTCTCTTTTAGAATAATTTTGTATTG
GGGAGAAGCAGGAAAAAGCAGCAATGCTTTATCTTGCTTGGCCCTGGATGGAAATGAAGTTTTCTTCCGGATCAAAAGGAGTACCCAACTGAAGAAGCTAATGAATGCTT
ACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGACTGCGTGCAGAGCAGACTCCGGAAGAGCTGGAAATGGAGGATGGAGATGAG
ATTGATGCAATGCTTCACCAAACTGGAGGTGGAGAGATCCACTGCCCTGATGTTGTAAAAAGTCCCAAAATTATGAAGGAAACGAAGAAGCTTTTGCTATTGGTCAGTTG
TTATCTGTCTCATAATCAGCCTAAAGATGGTATTACAATGTTTTAA
mRNA sequenceShow/hide mRNA sequence
TAAATACAAGGCAAAGCATTTTAAACTGCGTCGTTTCTACGGCAACTTAATTCCAATCATTCCCGTATTTGTGTACGTTGGATCAATGAATCCAACAACGCATCCCAACC
GTCCATTTAGAACCTCAAAAATTCCACCCACTTTCCCTTGAAAACTCAGCGTCGCATATAGTGCAGAACCAGGCAAAGACCACTTCGAGATTTTCCGAACCCTTTTTCAT
TCTTCGCTGGGAAATCTGTAAGATCAAACCCCAGAAATTTTCCTTCTTCCAACTTCAAATAATGTCGGGCGTTACCAATCAAGAAGAGGACAAGAAGCCCACCGATCAGT
CGGCTCATATCAACCTCAAAGTCAAGGGCCAGATGGTCTCTTTTAGAATAATTTTGTATTGGGGAGAAGCAGGAAAAAGCAGCAATGCTTTATCTTGCTTGGCCCTGGAT
GGAAATGAAGTTTTCTTCCGGATCAAAAGGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGA
CGGCCGCCGACTGCGTGCAGAGCAGACTCCGGAAGAGCTGGAAATGGAGGATGGAGATGAGATTGATGCAATGCTTCACCAAACTGGAGGTGGAGAGATCCACTGCCCTG
ATGTTGTAAAAAGTCCCAAAATTATGAAGGAAACGAAGAAGCTTTTGCTATTGGTCAGTTGTTATCTGTCTCATAATCAGCCTAAAGATGGTATTACAATGTTTTAATGA
ATAAACAACTGAAAAACATTGATCAAGAAAGCACTTTGCTTTGCTATTTGAATTATGGAATGATTCCATATCCCTGCTAAAGGTAATACTCTTCCTTTAGAGGTAGTTTG
TTTGCTAGAGAAGCACGAGAATCTTCTTTGACATGTGAAACTCTTGTTTGTTTGAAGATTTTGAGGTTGATAGTATTCGAACATCTAACTTCAAGGTTGATAGTACTCTT
TTGGTGTATGAGATAATTTGGAGGTGAAAGGGGGATCTGATGGAGGGAATTATGAGAATTGAGAGAGGTGGGGGGATTAAGGGGATGATACAAAACTAATGTAATTGACA
CCAGCAATTGTGGAAATAGACTAATTGAATGCTTCTAACATTCAAGGACATCATTTGAAGAAAACACTCAATTCTGTTCT
Protein sequenceShow/hide protein sequence
MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKSSNALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDE
IDAMLHQTGGGEIHCPDVVKSPKIMKETKKLLLLVSCYLSHNQPKDGITMF