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Clc10G05310 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G05310
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDUF4228 domain protein
Genome locationClcChr10:5886635..5892605
RNA-Seq ExpressionClc10G05310
SyntenyClc10G05310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650133.1 hypothetical protein Csa_011778 [Cucumis sativus]1.2e-3379.8Show/hide
Query:  MGNCTSNKYVAET-MPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQ
        MGNCTSNKY+AET +PMSD+DEE  EM+RRRLV  +GA+KC ASTTTELKIRITKR+LEKLL KVDVEELPVTELLS+LID+GD FESTH+ SW+PSLQ
Subjt:  MGNCTSNKYVAET-MPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQ

KAG6577418.1 hypothetical protein SDJN03_24992, partial [Cucurbita argyrosperma subsp. sororia]5.7e-3172.55Show/hide
Query:  MGNCTSNKYVAETMPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQSI
        MGNCTSNKY+AETMPMS E+EE VE V+R+L ADDGA +   +TTTE+KIR+TKR+LEKLL KV+VEELPVTELL ++I++GD  ESTHR SW+PSLQSI
Subjt:  MGNCTSNKYVAETMPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQSI

Query:  PE
        PE
Subjt:  PE

XP_008463409.1 PREDICTED: uncharacterized protein LOC103501580 [Cucumis melo]9.0e-3780.39Show/hide
Query:  MGNCTSNKYVAETMPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQSI
        MGNCTSNKY+AETMPMSD++EE  EM+RRRLV +  A+KC ASTTTELKIRITK++LEKLL KVD+EELPV ELLS+LID+GDAFESTHR SWQPSLQSI
Subjt:  MGNCTSNKYVAETMPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQSI

Query:  PE
        PE
Subjt:  PE

XP_031739098.1 uncharacterized protein LOC116402843 [Cucumis sativus]5.9e-3680.58Show/hide
Query:  MGNCTSNKYVAET-MPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQS
        MGNCTSNKY+AET +PMSD+DEE  EM+RRRLV  +GA+KC ASTTTELKIRITKR+LEKLL KVDVEELPVTELLS+LID+GD FESTH+ SW+PSLQS
Subjt:  MGNCTSNKYVAET-MPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQS

Query:  IPE
        IPE
Subjt:  IPE

XP_038904231.1 uncharacterized protein LOC120090574 [Benincasa hispida]1.8e-4087.25Show/hide
Query:  MGNCTSNKYVAETMPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQSI
        MGNCTSNKY+AETMPMSDEDEEAVE VRRRLV  DGARKC A+TTTELKIRITKR+LEKLL KVDVEELPVTELLS+LID+GDAFESTH+ SW+PSLQSI
Subjt:  MGNCTSNKYVAETMPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQSI

Query:  PE
        PE
Subjt:  PE

TrEMBL top hitse value%identityAlignment
A0A0A0L2D8 Uncharacterized protein2.8e-3680.58Show/hide
Query:  MGNCTSNKYVAET-MPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQS
        MGNCTSNKY+AET +PMSD+DEE  EM+RRRLV  +GA+KC ASTTTELKIRITKR+LEKLL KVDVEELPVTELLS+LID+GD FESTH+ SW+PSLQS
Subjt:  MGNCTSNKYVAET-MPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQS

Query:  IPE
        IPE
Subjt:  IPE

A0A1S3CJ77 uncharacterized protein LOC1035015804.4e-3780.39Show/hide
Query:  MGNCTSNKYVAETMPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQSI
        MGNCTSNKY+AETMPMSD++EE  EM+RRRLV +  A+KC ASTTTELKIRITK++LEKLL KVD+EELPV ELLS+LID+GDAFESTHR SWQPSLQSI
Subjt:  MGNCTSNKYVAETMPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQSI

Query:  PE
        PE
Subjt:  PE

A0A5D3BTQ9 DUF4228 domain protein4.4e-3780.39Show/hide
Query:  MGNCTSNKYVAETMPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQSI
        MGNCTSNKY+AETMPMSD++EE  EM+RRRLV +  A+KC ASTTTELKIRITK++LEKLL KVD+EELPV ELLS+LID+GDAFESTHR SWQPSLQSI
Subjt:  MGNCTSNKYVAETMPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQSI

Query:  PE
        PE
Subjt:  PE

A0A6J1DBT0 uncharacterized protein LOC1110190482.8e-3174.53Show/hide
Query:  MGNCTSNKYVAETMPMSDEDEEAVEMVRRRLVADDGARKCLAST----TTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPS
        MGNCTSNKY AE  PMSDE EEAVE V+RRL+ DD     L S+    TTE+KIRITKR+LEKLLRKVDVEELPVTELLS+LID+GDAFESTHR SW+PS
Subjt:  MGNCTSNKYVAETMPMSDEDEEAVEMVRRRLVADDGARKCLAST----TTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPS

Query:  LQSIPE
        LQ+I E
Subjt:  LQSIPE

A0A6J1EVV2 uncharacterized protein LOC1114384723.0e-3072.55Show/hide
Query:  MGNCTSNKYVAETMPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQSI
        MGNCTSNKY+AETMPMS E+EE VE V+R+L ADDGA +   +TTTE+KIR+TKR+LEKLL KV+VEELPVTELL ++I++GD  ESTHR SW+PSLQSI
Subjt:  MGNCTSNKYVAETMPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQSI

Query:  PE
        PE
Subjt:  PE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21920.1 unknown protein4.0e-0633.86Show/hide
Query:  MGNCTSNKYVAETMPMSDEDEEAVEMVRRR---LVADDG--ARKCLASTTT-------------ELKIRITKRDLEKLLRKVDVEELPVTELLSELI-DI
        MGNC        T    D++    +  RRR   +V DD     K L  T+              E+KIRITK++LE L+R + ++ L   E+LS+LI + 
Subjt:  MGNCTSNKYVAETMPMSDEDEEAVEMVRRR---LVADDG--ARKCLASTTT-------------ELKIRITKRDLEKLLRKVDVEELPVTELLSELI-DI

Query:  GDAF------ESTHRSSWQPSLQSIPE
        GD         + H   W+P LQSIPE
Subjt:  GDAF------ESTHRSSWQPSLQSIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTGTACAAGCAACAAATATGTGGCAGAGACAATGCCGATGAGCGACGAGGACGAGGAGGCGGTGGAGATGGTGAGGAGAAGGCTGGTTGCCGATGACGGAGC
TCGGAAATGTTTGGCGAGTACCACGACGGAGCTGAAGATTAGGATCACCAAGAGAGATCTGGAGAAGTTATTGAGAAAAGTGGATGTGGAGGAGCTGCCAGTGACGGAGC
TGTTATCGGAGTTAATCGACATCGGCGATGCGTTTGAGAGTACTCACCGGAGTTCGTGGCAGCCTTCTTTGCAAAGCATTCCTGAGGCTCTGGAGATGATGAAGAGAAGC
CTTATGGCTTACGAGGGGACCTCAAGATCTTCGGGGGCGGCGGCGACGACGAAGGTGAAGATCAAGATCACAAAGAGGGAGCTAGAGATATTACTAGGTAATTATAAGGT
GGTGGAGGTGACGGAGGAGCTGCCTACAGCACAGTTCTTATCACGGCTGATCGATGTCGATGATGCGCTCGAGATGCAGCCGCGGTCGTGGCGGCCTTCCCTGCAGAGCA
TCCCGGAGACGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATTGTACAAGCAACAAATATGTGGCAGAGACAATGCCGATGAGCGACGAGGACGAGGAGGCGGTGGAGATGGTGAGGAGAAGGCTGGTTGCCGATGACGGAGC
TCGGAAATGTTTGGCGAGTACCACGACGGAGCTGAAGATTAGGATCACCAAGAGAGATCTGGAGAAGTTATTGAGAAAAGTGGATGTGGAGGAGCTGCCAGTGACGGAGC
TGTTATCGGAGTTAATCGACATCGGCGATGCGTTTGAGAGTACTCACCGGAGTTCGTGGCAGCCTTCTTTGCAAAGCATTCCTGAGGCTCTGGAGATGATGAAGAGAAGC
CTTATGGCTTACGAGGGGACCTCAAGATCTTCGGGGGCGGCGGCGACGACGAAGGTGAAGATCAAGATCACAAAGAGGGAGCTAGAGATATTACTAGGTAATTATAAGGT
GGTGGAGGTGACGGAGGAGCTGCCTACAGCACAGTTCTTATCACGGCTGATCGATGTCGATGATGCGCTCGAGATGCAGCCGCGGTCGTGGCGGCCTTCCCTGCAGAGCA
TCCCGGAGACGGATTGA
Protein sequenceShow/hide protein sequence
MGNCTSNKYVAETMPMSDEDEEAVEMVRRRLVADDGARKCLASTTTELKIRITKRDLEKLLRKVDVEELPVTELLSELIDIGDAFESTHRSSWQPSLQSIPEALEMMKRS
LMAYEGTSRSSGAAATTKVKIKITKRELEILLGNYKVVEVTEELPTAQFLSRLIDVDDALEMQPRSWRPSLQSIPETD