; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G05360 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G05360
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein translation factor SUI1 homolog
Genome locationClcChr10:5945417..5948448
RNA-Seq ExpressionClc10G05360
SyntenyClc10G05360
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsIPR001950 - SUI1 domain
IPR005874 - Eukaryotic translation initiation factor SUI1
IPR036877 - SUI1 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025154.1 SUI1 domain-containing protein [Cucumis melo var. makuwa]3.5e-5593.1Show/hide
Query:  QANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFL
        Q+ +MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+KILKD+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFL
Subjt:  QANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFL

Query:  VQAGLVKKDQIKIHGF
        VQAGLVKKDQIKIHGF
Subjt:  VQAGLVKKDQIKIHGF

PON51499.1 Eukaryotic translation initiation factor SUI [Parasponia andersonii]3.9e-5483.59Show/hide
Query:  SFSFLGAFRY-HQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQL
        +F+F+ +F++  QA YMV+LD+Q+PSAFDPFA+AKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLK+E+SY+KILKDLKK FCCNGNVVQDKELGKIIQL
Subjt:  SFSFLGAFRY-HQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQL

Query:  QGDQRKNVSQFLVQAGLVKKDQIKIHGF
        QGDQRK VSQFLVQAGLVKKD IKIHGF
Subjt:  QGDQRKNVSQFLVQAGLVKKDQIKIHGF

XP_004139787.1 protein translation factor SUI1 homolog 1 [Cucumis sativus]3.9e-5495.54Show/hide
Query:  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
        MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+KILKD+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
Subjt:  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG

Query:  LVKKDQIKIHGF
        LVKKDQIKIHGF
Subjt:  LVKKDQIKIHGF

XP_016903023.1 PREDICTED: protein translation factor SUI1 homolog 2 [Cucumis melo]3.2e-5699.11Show/hide
Query:  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
        MVDLD+QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
Subjt:  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG

Query:  LVKKDQIKIHGF
        LVKKDQIKIHGF
Subjt:  LVKKDQIKIHGF

XP_038903171.1 protein translation factor SUI1 homolog 2-like [Benincasa hispida]7.1e-5698.21Show/hide
Query:  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
        MVDLD+QIP+AFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
Subjt:  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG

Query:  LVKKDQIKIHGF
        LVKKDQIKIHGF
Subjt:  LVKKDQIKIHGF

TrEMBL top hitse value%identityAlignment
A0A0A0L7M8 SUI1 domain-containing protein1.5e-5699.11Show/hide
Query:  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
        MVDLD+QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
Subjt:  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG

Query:  LVKKDQIKIHGF
        LVKKDQIKIHGF
Subjt:  LVKKDQIKIHGF

A0A1S4E468 protein translation factor SUI1 homolog 21.5e-5699.11Show/hide
Query:  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
        MVDLD+QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
Subjt:  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG

Query:  LVKKDQIKIHGF
        LVKKDQIKIHGF
Subjt:  LVKKDQIKIHGF

A0A2P5BRS0 Eukaryotic translation initiation factor SUI1.9e-5483.59Show/hide
Query:  SFSFLGAFRY-HQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQL
        +F+F+ +F++  QA YMV+LD+Q+PSAFDPFA+AKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLK+E+SY+KILKDLKK FCCNGNVVQDKELGKIIQL
Subjt:  SFSFLGAFRY-HQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQL

Query:  QGDQRKNVSQFLVQAGLVKKDQIKIHGF
        QGDQRK VSQFLVQAGLVKKD IKIHGF
Subjt:  QGDQRKNVSQFLVQAGLVKKDQIKIHGF

A0A5D3BUS5 SUI1 domain-containing protein1.5e-5699.11Show/hide
Query:  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
        MVDLD+QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
Subjt:  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG

Query:  LVKKDQIKIHGF
        LVKKDQIKIHGF
Subjt:  LVKKDQIKIHGF

A0A5D3DHR8 SUI1 domain-containing protein1.7e-5593.1Show/hide
Query:  QANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFL
        Q+ +MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+KILKD+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFL
Subjt:  QANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFL

Query:  VQAGLVKKDQIKIHGF
        VQAGLVKKDQIKIHGF
Subjt:  VQAGLVKKDQIKIHGF

SwissProt top hitse value%identityAlignment
A6MZM2 Protein translation factor SUI1 homolog9.0e-4677.39Show/hide
Query:  MVDLDIQIPSAFDPFADAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV
        M DLDIQIP+AFDPFA+A   D   A G+K+YVH+R+QQRNG+K LTTVQGLKKEFSY+KILKDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLV
Subjt:  MVDLDIQIPSAFDPFADAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV

Query:  QAGLVKKDQIKIHGF
        QAG+VKK+ IKIHGF
Subjt:  QAGLVKKDQIKIHGF

O82569 Protein translation factor SUI1 homolog6.9e-4679.65Show/hide
Query:  MVDLDIQIPSAFDPFADAKDSDAPG-TKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA
        MVD DIQIP++FDPFA+A+ +DA G TKEYVHIR+QQRNG+K LTTVQGLKKE SYDKILKDLKK  CCNG VV DKELGK+IQLQGDQRKNVS F+VQA
Subjt:  MVDLDIQIPSAFDPFADAKDSDAPG-TKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA

Query:  GLVKKDQIKIHGF
        G+VKKDQIK+H F
Subjt:  GLVKKDQIKIHGF

P41568 Protein translation factor SUI1 homolog 15.3e-4680.53Show/hide
Query:  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA
        M +LD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KILKDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQA
Subjt:  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA

Query:  GLVKKDQIKIHGF
        GLVKKD IKIHGF
Subjt:  GLVKKDQIKIHGF

Q0D5W6 Protein translation factor SUI1 homolog9.0e-4677.39Show/hide
Query:  MVDLDIQIPSAFDPFADAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV
        M DLDIQIP+AFDPFA+A   D   A G+K+YVH+R+QQRNG+K LTTVQGLKKEFSY+KILKDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLV
Subjt:  MVDLDIQIPSAFDPFADAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV

Query:  QAGLVKKDQIKIHGF
        QAG+VKK+ IKIHGF
Subjt:  QAGLVKKDQIKIHGF

Q94JV4 Protein translation factor SUI1 homolog 21.1e-4680.53Show/hide
Query:  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA
        M DL++Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KILKDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQA
Subjt:  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA

Query:  GLVKKDQIKIHGF
        GLVKKD IKIHGF
Subjt:  GLVKKDQIKIHGF

Arabidopsis top hitse value%identityAlignment
AT1G54290.1 Translation initiation factor SUI1 family protein7.6e-4880.53Show/hide
Query:  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA
        M DL++Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KILKDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQA
Subjt:  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA

Query:  GLVKKDQIKIHGF
        GLVKKD IKIHGF
Subjt:  GLVKKDQIKIHGF

AT4G27130.1 Translation initiation factor SUI1 family protein3.8e-4780.53Show/hide
Query:  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA
        M +LD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KILKDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQA
Subjt:  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA

Query:  GLVKKDQIKIHGF
        GLVKKD IKIHGF
Subjt:  GLVKKDQIKIHGF

AT5G54760.1 Translation initiation factor SUI1 family protein4.9e-4780.53Show/hide
Query:  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA
        M +LD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KILKDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQA
Subjt:  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA

Query:  GLVKKDQIKIHGF
        GLVKKD IKIHGF
Subjt:  GLVKKDQIKIHGF

AT5G54940.1 Translation initiation factor SUI1 family protein4.6e-5386.61Show/hide
Query:  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
        MV+LDIQIPSA+DPFA+AKDSDAPG KE +HIR+QQRNGKK LTTVQGLKKE+SY++ILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G
Subjt:  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG

Query:  LVKKDQIKIHGF
        + KKDQIKIHGF
Subjt:  LVKKDQIKIHGF

AT5G54940.2 Translation initiation factor SUI1 family protein4.6e-5386.61Show/hide
Query:  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
        MV+LDIQIPSA+DPFA+AKDSDAPG KE +HIR+QQRNGKK LTTVQGLKKE+SY++ILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G
Subjt:  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG

Query:  LVKKDQIKIHGF
        + KKDQIKIHGF
Subjt:  LVKKDQIKIHGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCCTCTCACAACTTCAACATAGCCTTCTCATTCTTCTCAAGCTTTCTATATTCGCATTCTGCTTCGACTTCAGCTTCAGCTTCTTGGGTGCCTTCAGA
TACCACCAAGCAAATTACATGGTTGATCTAGATATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATAC
GTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAG
GACTTCTGTTGCAACGGGAATGTTGTTCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTTGTTCAGGCT
GGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCCTCTCACAACTTCAACATAGCCTTCTCATTCTTCTCAAGCTTTCTATATTCGCATTCTGCTTCGACTTCAGCTTCAGCTTCTTGGGTGCCTTCAGA
TACCACCAAGCAAATTACATGGTTGATCTAGATATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATAC
GTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAG
GACTTCTGTTGCAACGGGAATGTTGTTCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTTGTTCAGGCT
GGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA
Protein sequenceShow/hide protein sequence
MAALSQLQHSLLILLKLSIFAFCFDFSFSFLGAFRYHQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKK
DFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF