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Clc10G05920 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G05920
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSpindle pole body component protein
Genome locationClcChr10:7594061..7594608
RNA-Seq ExpressionClc10G05920
SyntenyClc10G05920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577452.1 hypothetical protein SDJN03_25026, partial [Cucurbita argyrosperma subsp. sororia]4.1e-5887.32Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSR+ENPEAT APG +EM+S+ PITTRKHRRRKR ALLPSAAKLAADWKPSLGAISEDKVVLV+ EREKSD+QTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKS

Query:  GSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        GS DGE+RGV+GR+NSNDF  RRSPA+IPVVIPAFSPTPFLF
Subjt:  GSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

KAG7015524.1 hypothetical protein SDJN02_23160 [Cucurbita argyrosperma subsp. argyrosperma]7.0e-5887.32Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSR+E PEAT APG +EM+S+ PITTRKHRRRKR ALLPSAAKLAADWKPSLGAISEDKVVLV+ EREKSD+QTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKS

Query:  GSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        GSRDGE+RGV+GR+NSNDF  RRSPA+IPVVIPAFSPTPFLF
Subjt:  GSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

XP_004149939.2 uncharacterized protein LOC101213465 [Cucumis sativus]2.6e-6090.91Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRK
        MKFLFEFVSCCVPVNMSRI+NPE TEA G KEMRS+ PITTRKHRRRKRSALLPS AAKLAADWKPSLGAISEDKVVLVVMEREKSDEQT E ERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRK

Query:  SGSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        S SRDGESRGVHGRNNSNDFSLR+SP+AIPVVIPAFSP PFLF
Subjt:  SGSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

XP_022932132.1 uncharacterized protein LOC111438455 [Cucurbita moschata]6.4e-5988.03Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSR+ENPEAT APG +EM+S+ PITTRKHRRRKR ALLPSAAKLAADWKPSLGAISEDKVVLV+ EREKSD+QTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKS

Query:  GSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        GSRDGE+RGV+GR+NSNDF  RRSPA+IPVVIPAFSPTPFLF
Subjt:  GSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

XP_038905048.1 uncharacterized protein LOC120091204 [Benincasa hispida]1.3e-6494.37Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSRIENPE TEAPG KE+RS+ PITTRKHRRRKRSA LPSAAKLA DWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKS

Query:  GSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        GSRDGESRGVHGRNNSNDFS+RRSPAAIPVVIPAFSPTPFLF
Subjt:  GSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

TrEMBL top hitse value%identityAlignment
A0A0A0L6G1 Uncharacterized protein1.2e-6090.91Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRK
        MKFLFEFVSCCVPVNMSRI+NPE TEA G KEMRS+ PITTRKHRRRKRSALLPS AAKLAADWKPSLGAISEDKVVLVVMEREKSDEQT E ERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRK

Query:  SGSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        S SRDGESRGVHGRNNSNDFSLR+SP+AIPVVIPAFSP PFLF
Subjt:  SGSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

A0A1S3BTM8 uncharacterized protein LOC1034933941.7e-5788.11Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRK
        MKFLFEFVSCCVPVNMSRIENPE TEA   KEMR++ PITTRKHRRRKRSALLPS AAKLAADWKPSLGAISEDKVVLVVMEREKSD+Q AE ERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRK

Query:  SGSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        SGSRDGESR VHGR NSNDFSLR++P+AIPVVIPAFSP PFLF
Subjt:  SGSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

A0A6J1EVT0 uncharacterized protein LOC1114384553.1e-5988.03Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSR+ENPEAT APG +EM+S+ PITTRKHRRRKR ALLPSAAKLAADWKPSLGAISEDKVVLV+ EREKSD+QTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKS

Query:  GSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        GSRDGE+RGV+GR+NSNDF  RRSPA+IPVVIPAFSPTPFLF
Subjt:  GSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

A0A6J1FP47 uncharacterized protein LOC1114472259.6e-5380.28Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKS
        MKFL EFVSCCVPV++SR+ENPEATEAPG +E+RS+ PITTR HRRR+R AL  SAAK+A DW PSLGAISED VVLVVMER+KS+++TAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKS

Query:  GSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        GS++G++RGVHGRNNSNDF  RRSPAAIPVVIPAFSPTPFLF
Subjt:  GSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

A0A6J1JD62 uncharacterized protein LOC1114833137.6e-5886.62Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSR+ENPEAT APG +EM+S+ PI TRKHRRRKR ALLPSAAKLAADWKPSLGAISEDKVVLV+ EREKSD+QTA SERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKS

Query:  GSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        GSRDGE+RGV+GR+NSNDF  RRSPA+IPVVIPAFSPTPFLF
Subjt:  GSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G54585.1 unknown protein2.4e-0834.51Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKS
        MKFL E V  C      + +   A+ A       + T +  R+ R+R R A  P      A+W+PSL  ISE+K  +  +  EK++E+     +S     
Subjt:  MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKS

Query:  GSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        G     S G H R  S+DF       A   VIPAFSPTPF+F
Subjt:  GSRDGESRGVHGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTCCTTTTTGAGTTCGTTTCTTGCTGCGTGCCGGTGAACATGTCACGCATAGAGAATCCGGAGGCGACGGAGGCACCAGGCCCCAAGGAGATGAGATCTATGAC
TCCGATTACCACCAGGAAACACCGGCGGAGAAAACGAAGCGCGTTGTTGCCTTCGGCGGCGAAACTAGCCGCCGATTGGAAGCCGTCGCTGGGAGCGATTTCGGAGGATA
AGGTAGTTCTGGTAGTGATGGAGAGAGAGAAGAGCGATGAACAGACGGCGGAATCGGAACGATCGGTGAAAAGAAAGAGCGGATCTCGAGACGGAGAAAGCAGAGGAGTT
CACGGCCGTAATAACAGTAACGATTTCAGCCTTAGGCGAAGTCCGGCAGCGATTCCGGTGGTGATTCCGGCGTTTTCTCCGACTCCGTTCTTGTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTCCTTTTTGAGTTCGTTTCTTGCTGCGTGCCGGTGAACATGTCACGCATAGAGAATCCGGAGGCGACGGAGGCACCAGGCCCCAAGGAGATGAGATCTATGAC
TCCGATTACCACCAGGAAACACCGGCGGAGAAAACGAAGCGCGTTGTTGCCTTCGGCGGCGAAACTAGCCGCCGATTGGAAGCCGTCGCTGGGAGCGATTTCGGAGGATA
AGGTAGTTCTGGTAGTGATGGAGAGAGAGAAGAGCGATGAACAGACGGCGGAATCGGAACGATCGGTGAAAAGAAAGAGCGGATCTCGAGACGGAGAAAGCAGAGGAGTT
CACGGCCGTAATAACAGTAACGATTTCAGCCTTAGGCGAAGTCCGGCAGCGATTCCGGTGGTGATTCCGGCGTTTTCTCCGACTCCGTTCTTGTTCTGA
Protein sequenceShow/hide protein sequence
MKFLFEFVSCCVPVNMSRIENPEATEAPGPKEMRSMTPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKSGSRDGESRGV
HGRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF