; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G05970 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G05970
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description(+)-gamma-cadinene synthase-like
Genome locationClcChr10:7788593..7789222
RNA-Seq ExpressionClc10G05970
SyntenyClc10G05970
Gene Ontology termsGO:0016102 - diterpenoid biosynthetic process (biological process)
GO:0000287 - magnesium ion binding (molecular function)
GO:0010333 - terpene synthase activity (molecular function)
InterPro domainsIPR008949 - Isoprenoid synthase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650158.1 hypothetical protein Csa_009547 [Cucumis sativus]5.5e-4974.24Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        MGDIATKEVF+WL D PKILKAS  I RLMDD VS KFE+EREH++SA ECYM N+G SE ET AE  KQ+EDAWK INE CL PM VPMPFL+ +LNL+
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        RV+ALLY  EDGYTNSKGRTKLLIQS+L+DP+
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

NP_001315388.1 (+)-gamma-cadinene synthase-like [Cucumis melo]4.5e-5175.76Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        MGDIATKE+FDWL D PKILKAS  I RLMDD VS KFE+EREHV+SA ECYM+NYGCSE ET A+  KQ+EDAWK IN+ CL PMTVP+PFL+ VLNL+
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        RV+ALLY  EDGYTNSKGRTKLLIQS+L+DP+
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

XP_022142732.1 (+)-gamma-cadinene synthase-like [Momordica charantia]6.5e-5073.48Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        MGDIAT+EVFDWLS  PKI++AS +I RLMDD +S KFEQ+REHV+SA ECYM+ YGCSE E   EF KQ+ +AWK+INE+CL P TVPM FL+RVLNLS
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        RV+ALLY DEDGYTNSKGRTK LI+S+LVDPV
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

XP_038903601.1 (+)-gamma-cadinene synthase-like [Benincasa hispida]1.1e-4972.73Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        MGD+AT+EVFDW+ + PKIL+AS II RLMDD VS +FE++REHV SA ECYM++YGCS+ ET+AEF+K++EDAWKNINE  L P +VPMPFLL VLNL+
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        RVIALLY DEDGYTN+KGRTK+LIQS+LV+PV
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

XP_038905757.1 (+)-gamma-cadinene synthase-like [Benincasa hispida]2.7e-5177.86Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        MGDIATKEVFDWLS+ PKIL+AS II RL +D VS KFE++REHV+SA ECYM NYGCSE ET AEFRK++EDAWKNINE CL P TVPMPFLL VLNL+
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDP
        RVIA LY DEDGYTNSKG TKL+IQS+LV+P
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDP

TrEMBL top hitse value%identityAlignment
A0A0A0L579 Uncharacterized protein2.7e-4974.24Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        MGDIATKEVF+WL D PKILKAS  I RLMDD VS KFE+EREH++SA ECYM N+G SE ET AE  KQ+EDAWK INE CL PM VPMPFL+ +LNL+
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        RV+ALLY  EDGYTNSKGRTKLLIQS+L+DP+
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

A0A0B4VEV4 Sesquiterpene synthase Tps12.2e-5175.76Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        MGDIATKE+FDWL D PKILKAS  I RLMDD VS KFE+EREHV+SA ECYM+NYGCSE ET A+  KQ+EDAWK IN+ CL PMTVP+PFL+ VLNL+
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        RV+ALLY  EDGYTNSKGRTKLLIQS+L+DP+
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

A0A1S4DZR2 (+)-gamma-cadinene synthase-like1.3e-5175.76Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        MGDIAT+E+FDWL D PKILKAS  I RLMDD VS KFE+EREHV+SA ECYM+NYGCSE ET A   KQ++DAWKNIN+ CL PMTVP+PFL+ VLNL+
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        RV+ALLY DEDGYTNSKGRTKLLIQS+L+DP+
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

A0A6J1CNP6 (+)-gamma-cadinene synthase-like3.2e-5073.48Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        MGDIAT+EVFDWLS  PKI++AS +I RLMDD +S KFEQ+REHV+SA ECYM+ YGCSE E   EF KQ+ +AWK+INE+CL P TVPM FL+RVLNLS
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        RV+ALLY DEDGYTNSKGRTK LI+S+LVDPV
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

Q66PX8 Beta-caryophyllene synthase7.8e-4973.48Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        MGDIATKEVF+WL D P+ILKAS  I RLMDD VS KFE+EREH++SA ECYM N+G SE ET AE  KQ+EDAWK INE CL PM VPMPFL+ +LNL+
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        RV+ALLY  EDGYTNSKGRTKLLIQS+L+DP+
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

SwissProt top hitse value%identityAlignment
B2KSJ5 (+)-gamma-cadinene synthase2.8e-4363.91Show/hide
Query:  MGD-IATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNL
        +GD I T EV  WLS+ P+I+KAS IICRLMDD  S KFEQEREHV SA ECYM  Y CSE E   E  K++ DAWK+ NE+  RP  VP+P L+RVLN 
Subjt:  MGD-IATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNL

Query:  SRVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        SRVI LLY DEDGYTN+K  TK LI+S+LVDP+
Subjt:  SRVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

B5A435 Sesquiterpene synthase1.7e-4059.09Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        MG+IA+KE FDWL   P +++AS  +CRLMDD  S KFEQER HV S  ECYM  YG +E E H EFRKQL  AWK+INE CLRP  VP P L+R+LNL+
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        RVI ++Y +EDGYT+ K   K  I S+L+DP+
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

F6M8H5 Probable sesquiterpene synthase1.7e-3756.82Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        MG+IA+KE FDWL   P +++AS  + RLMDD  S KFEQER HV S  ECYM  YG +E E   EFRK+L  AWK+INE CLRP  VP P L+R+LNL+
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        RVI ++Y +EDGYT+ K   K  I S+L+DP+
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

F6M8H7 Probable sesquiterpene synthase1.2e-3858.33Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        MG+IA+KE FDWL   P +++AS  + RLMDD  S KFEQER HV S  ECYM  YG +E E H EFRK+L  AWK+INE CLRP  VP P L R+LNL+
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        RVI ++Y +EDGYT+ K   K  I S+L+DPV
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

Q6Q3H3 (-)-germacrene D synthase4.9e-4058.33Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        MGD  TKE FDW+  KPKI++AS I+CRLMDD V  KFEQ+R HV SA ECYM  +G SE ET  EF + + +AWK+INE CL P  VPMP L+RVLNL+
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        RVI ++Y +EDGYT+     K  + S+L+DPV
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

Arabidopsis top hitse value%identityAlignment
AT3G29190.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein2.4e-1834.09Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        MG I  KE + WL  +PKI++A  I  RLM+D    K +  R +  +A  CYM  Y  +E E   EF K +  A K +NE  L  M V    L   + + 
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
         +I++ Y +++GYT+ +G+ K  + ++ VD +
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

AT4G20200.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein2.9e-1934.85Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        MG +ATKE F+WL  +PK+++   I  RLM+D +  + +  R +V +A  CYM  YG ++ E   E  K +  A K +NE  L    VP   L   ++L+
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        R++ + Y   +G+TN +G+ K  + S+ VD +
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

AT5G23960.1 terpene synthase 214.1e-2643.94Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        M D+A  + F+WLS  PKI  AS II R  DD  S +FE +REHV +  +CYM  +G S+          + DAWK++N+  +RP   P P L+RVLNLS
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        RVI + Y  +D YTN K   K  I S+L++ +
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

AT5G23960.2 terpene synthase 214.1e-2643.94Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        M D+A  + F+WLS  PKI  AS II R  DD  S +FE +REHV +  +CYM  +G S+          + DAWK++N+  +RP   P P L+RVLNLS
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        RVI + Y  +D YTN K   K  I S+L++ +
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV

AT5G44630.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein1.3e-1932.58Show/hide
Query:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS
        +G+I  KE F+WL  +PK+++      RLMDD    + + E+ +  +A   YM+ +G ++ E   E  K   D  K +NE CL+  T+P   L++ +N +
Subjt:  MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLS

Query:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV
        R + +LY  +D Y + +G+ K  ++ +LVDP+
Subjt:  RVIALLYCDEDGYTNSKGRTKLLIQSILVDPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
atgggagacattgcaacaaaagaggtatttgattggctttcagacaaacccaaaattcttaaggcttcgtgcatcatttgtagactcatggacgattttgtctcctccaa
gtttgagcaagaaagagaacatgttctttccgcggctgaatgttacatggacaattatggctgctcagaaggagaaacacatgctgaatttcgaaagcaattagaagatg
catggaagaatataaatgaaagttgccttcgtccaatgactgttccaatgccatttttattgcgtgtattgaatcttagcagagttatagccctactttattgtgatgag
gatggatacacaaattccaagggtaggactaaacttcttatccagtctatacttgttgacccagtgtga
mRNA sequenceShow/hide mRNA sequence
tttgcactacttgcaactatttcatttgtttgcatgggagacattgcaacaaaagaggtatttgattggctttcagacaaacccaaaattcttaaggcttcgtgcatcat
ttgtagactcatggacgattttgtctcctccaagtttgagcaagaaagagaacatgttctttccgcggctgaatgttacatggacaattatggctgctcagaaggagaaa
cacatgctgaatttcgaaagcaattagaagatgcatggaagaatataaatgaaagttgccttcgtccaatgactgttccaatgccatttttattgcgtgtattgaatctt
agcagagttatagccctactttattgtgatgaggatggatacacaaattccaagggtaggactaaacttcttatccagtctatacttgttgacccagtgtgattttcact
acttagcaactaaaagggttagtgaaatccaatatttctatgctccaattgtgttgtaacatgtaatgtatttaatttgaaaggtcgcctttgttat
Protein sequenceShow/hide protein sequence
MGDIATKEVFDWLSDKPKILKASCIICRLMDDFVSSKFEQEREHVLSAAECYMDNYGCSEGETHAEFRKQLEDAWKNINESCLRPMTVPMPFLLRVLNLSRVIALLYCDE
DGYTNSKGRTKLLIQSILVDPV