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Clc10G06280 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G06280
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr10:8275092..8281229
RNA-Seq ExpressionClc10G06280
SyntenyClc10G06280
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046872.1 uncharacterized protein E6C27_scaffold230G00270 [Cucumis melo var. makuwa]5.6e-5680.41Show/hide
Query:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHKIGQGGIKETPHSSSLNEKKPEELKLVMDKMQAEIEETEGHKNK
        MD V+ NNRIRNLKDG  HRDLR+KI QFLTGVGKFAVDSTIFSSLK +SGKNQ HKI QGG+K+TPHSSSLNE+KPEE+KLVMDKMQAE+EE EG++NK
Subjt:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHKIGQGGIKETPHSSSLNEKKPEELKLVMDKMQAEIEETEGHKNK

Query:  MK--QHHCTSAEVV-DDSEPLKKLPGEGAKGSANVTENRKRIFIRSRL
        MK  QHHCTSAE+V DDSEPLKK PGE  KGSANV +N+KRIFIRSRL
Subjt:  MK--QHHCTSAEVV-DDSEPLKKLPGEGAKGSANVTENRKRIFIRSRL
KAG6577390.1 hypothetical protein SDJN03_24964, partial [Cucurbita argyrosperma subsp. sororia]3.0e-5780Show/hide
Query:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHKIGQGGIKETPHSSSLNEKKPEELKLVMDKMQAEIEETEGHKNK
        MDDV GNNRIRNLKDGFHHRDLRTKII FL GVGKFAVDSTIF+SLK +SG NQ +KI QGG+K+ PHS SLNEK+PEELKLVMDKM AE+EE E +KNK
Subjt:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHKIGQGGIKETPHSSSLNEKKPEELKLVMDKMQAEIEETEGHKNK

Query:  MKQHHCTSAEVVDDSEPLKKLPGEGAKGSANVTENRKRIFIRSRL
        MK HHCTSA +VD S PLKKLPGEG KGSANV +N+KRIFIRSRL
Subjt:  MKQHHCTSAEVVDDSEPLKKLPGEGAKGSANVTENRKRIFIRSRL
XP_008452286.1 PREDICTED: uncharacterized protein LOC103493357 [Cucumis melo]1.9e-5681.08Show/hide
Query:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHKIGQGGIKETPHSSSLNEKKPEELKLVMDKMQAEIEETEGHKNK
        MD V+ NNRIRNLKDG  HRDLR+KI QFLTGVGKFAVDSTIFSSLK +SGKNQ HKI QGG+K+TPHSSSLNE+KPEE+KLVMDKMQAE+EE EG+KNK
Subjt:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHKIGQGGIKETPHSSSLNEKKPEELKLVMDKMQAEIEETEGHKNK

Query:  MK--QHHCTSAEVV-DDSEPLKKLPGEGAKGSANVTENRKRIFIRSRL
        MK  QHHCTSAE+V DDSEPLKK PGE  KGSANV +N+KRIFIRSRL
Subjt:  MK--QHHCTSAEVV-DDSEPLKKLPGEGAKGSANVTENRKRIFIRSRL
XP_023552444.1 uncharacterized protein LOC111810104 [Cucurbita pepo subsp. pepo]1.1e-5680Show/hide
Query:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHKIGQGGIKETPHSSSLNEKKPEELKLVMDKMQAEIEETEGHKNK
        MDDVVGNNRIRNL DGFHHRDLRTKII FL GVGKFAVDSTIF+SLK +SG NQ +KI QGG+K+TPHS SLNEK+PEELKLVMDKM AE+EE E +KNK
Subjt:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHKIGQGGIKETPHSSSLNEKKPEELKLVMDKMQAEIEETEGHKNK

Query:  MKQHHCTSAEVVDDSEPLKKLPGEGAKGSANVTENRKRIFIRSRL
        MK HHCTSA + D S PLKKLPGEG KGSANV +N+KRIFIRSRL
Subjt:  MKQHHCTSAEVVDDSEPLKKLPGEGAKGSANVTENRKRIFIRSRL
XP_038905013.1 uncharacterized protein LOC120091185 [Benincasa hispida]1.5e-6486.9Show/hide
Query:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHKIGQGGIKETPHSSSLNEKKPEELKLVMDKMQAEIEETEGHKNK
        MDDVVGNNRIRNL+DGFHHRDLRTKIIQFLTGVGKFAVDST FSSLK +SGKNQAHK+G GG+K+TPHSSSLNEKKPEELKLV+DKMQAE+E+TE  KNK
Subjt:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHKIGQGGIKETPHSSSLNEKKPEELKLVMDKMQAEIEETEGHKNK

Query:  MKQHHCTSAEVVDDSEPLKKLPGEGAKGSANVTENRKRIFIRSRL
        MKQHHCTSAE+VDDSEPLKKLPGEG KGSAN  +N+KRIFIRSRL
Subjt:  MKQHHCTSAEVVDDSEPLKKLPGEGAKGSANVTENRKRIFIRSRL
TrEMBL top hitse value%identityAlignment
A0A0A0L362 Uncharacterized protein1.4e-3982.98Show/hide
Query:  MAAWTTAARRIVPSHKPVSTAQIASLTHRRGFAAGGDHHGPSKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGRKEEKVGDGKH
        MAAW  A RRI+ SH  +ST QIASLTHRRG A GGDHHGP KVNFWEDPFNPSRWK EHFVIVSLTGWGLVLYGAY+FFTKG+KEEKVGDG+H
Subjt:  MAAWTTAARRIVPSHKPVSTAQIASLTHRRGFAAGGDHHGPSKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGRKEEKVGDGKH
A0A0A0L6J4 Uncharacterized protein1.8e-5274.52Show/hide
Query:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHKIGQGGIKETPHSSSLNEK---------KPEELKLVMDKMQAEI
        MDDV+GNNR R LKD   HRD+RTKIIQFLTGVGKFAVDSTIFSSLK +SGK++ HKI QGG+K+TP+SSSLNEK         KPEE+KLVMDKMQAE+
Subjt:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHKIGQGGIKETPHSSSLNEK---------KPEELKLVMDKMQAEI

Query:  EETEGHKNKMK--QHHCTSAEVV-DDSEPLKKLPGEGAKGSANVTENRKRIFIRSRL
        EE EG+ NKMK  QHHCTSAE+V DDSEPLKK  GEG KGSANV +N+KRIFIRSRL
Subjt:  EETEGHKNKMK--QHHCTSAEVV-DDSEPLKKLPGEGAKGSANVTENRKRIFIRSRL
A0A1S3BUM3 uncharacterized protein LOC1034933579.4e-5781.08Show/hide
Query:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHKIGQGGIKETPHSSSLNEKKPEELKLVMDKMQAEIEETEGHKNK
        MD V+ NNRIRNLKDG  HRDLR+KI QFLTGVGKFAVDSTIFSSLK +SGKNQ HKI QGG+K+TPHSSSLNE+KPEE+KLVMDKMQAE+EE EG+KNK
Subjt:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHKIGQGGIKETPHSSSLNEKKPEELKLVMDKMQAEIEETEGHKNK

Query:  MK--QHHCTSAEVV-DDSEPLKKLPGEGAKGSANVTENRKRIFIRSRL
        MK  QHHCTSAE+V DDSEPLKK PGE  KGSANV +N+KRIFIRSRL
Subjt:  MK--QHHCTSAEVV-DDSEPLKKLPGEGAKGSANVTENRKRIFIRSRL
A0A5D3BVT6 Uncharacterized protein2.7e-5680.41Show/hide
Query:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHKIGQGGIKETPHSSSLNEKKPEELKLVMDKMQAEIEETEGHKNK
        MD V+ NNRIRNLKDG  HRDLR+KI QFLTGVGKFAVDSTIFSSLK +SGKNQ HKI QGG+K+TPHSSSLNE+KPEE+KLVMDKMQAE+EE EG++NK
Subjt:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHKIGQGGIKETPHSSSLNEKKPEELKLVMDKMQAEIEETEGHKNK

Query:  MK--QHHCTSAEVV-DDSEPLKKLPGEGAKGSANVTENRKRIFIRSRL
        MK  QHHCTSAE+V DDSEPLKK PGE  KGSANV +N+KRIFIRSRL
Subjt:  MK--QHHCTSAEVV-DDSEPLKKLPGEGAKGSANVTENRKRIFIRSRL
A0A6J1CP03 uncharacterized protein LOC1110127752.9e-5075.68Show/hide
Query:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHK-IGQGGIKETPHSSSLNEKKPEELKLVMD-KMQAEIEETEGHK
        M DV G+ R R LKDGFHH DLR KIIQFLTGVGKFAVDSTIF+SL   +GKN+ HK I QGG+K+ PHSSSLN+KKPEELKLVMD KMQAE+EE E  K
Subjt:  MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHK-IGQGGIKETPHSSSLNEKKPEELKLVMD-KMQAEIEETEGHK

Query:  NKMKQHHCTSAEVVDDSEPLKKLPGEGAKGSANVTEN-RKRIFIRSRL
        NKMKQHHCTSA +V  SEPLKK PGEGAKGSAN  +N +KRIFIRSRL
Subjt:  NKMKQHHCTSAEVVDDSEPLKKLPGEGAKGSANVTEN-RKRIFIRSRL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20820.1 unknown protein3.2e-1750Show/hide
Query:  VPSHKPVSTAQIASLTHRRGFAAGGDHHGPSKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGRKEEKV
        +PS +  S A  AS+  RR  A   DHHG +KV+FW+ P NP  WK EHFV++SL+GWGL+ Y  Y+  T G+KE  V
Subjt:  VPSHKPVSTAQIASLTHRRGFAAGGDHHGPSKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGRKEEKV
AT2G20820.2 unknown protein3.9e-0747.06Show/hide
Query:  VPSHKPVSTAQIASLTHRRGFAAGGDHHGPSKVNFWEDPFNPSRWKGEHFV
        +PS +  S A  AS+  RR  A   DHHG +KV+FW+ P NP  WK EH++
Subjt:  VPSHKPVSTAQIASLTHRRGFAAGGDHHGPSKVNFWEDPFNPSRWKGEHFV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACGTCGTCGGAAACAACCGTATTCGTAATCTAAAAGACGGCTTTCACCACCGTGACCTGCGGACGAAGATCATCCAATTTCTCACCGGCGTTGGCAAGTTCGC
TGTTGACTCTACTATCTTCAGCTCTCTCAAGCCCATCTCCGGTAAGAATCAGGCACATAAGATTGGGCAGGGAGGAATAAAGGAAACGCCCCATTCATCCTCTTTAAATG
AAAAGAAGCCAGAAGAGCTTAAACTAGTGATGGATAAGATGCAGGCAGAGATAGAGGAAACAGAGGGGCACAAGAATAAAATGAAGCAGCACCATTGTACATCTGCAGAG
GTTGTTGATGACTCTGAACCACTAAAGAAGTTGCCAGGGGAAGGTGCCAAAGGATCAGCCAATGTAACCGAAAACAGGAAAAGGATCTTCATCCGATCCCGACTAATAGC
AAGAATAATGGATTCCTTTCTTGACAAGGCTTCTGTTAAGCTCCACGAGGTTCTCTTCTCGTCACAATTTCCAAAAGCAGAGCACCGAACCATGGCGGCATGGACGACGG
CAGCTCGCCGCATAGTTCCGTCTCACAAGCCAGTTTCTACGGCTCAAATCGCCTCTCTAACTCATCGGCGCGGTTTCGCCGCCGGTGGCGATCATCATGGACCTTCGAAG
GTGAACTTTTGGGAGGATCCATTTAATCCATCCAGATGGAAAGGAGAACATTTTGTGATTGTGTCTTTGACTGGATGGGGTTTAGTTCTTTATGGGGCCTACGAGTTCTT
CACTAAAGGCAGGAAGGAAGAGAAAGTTGGAGATGGAAAACACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGACGTCGTCGGAAACAACCGTATTCGTAATCTAAAAGACGGCTTTCACCACCGTGACCTGCGGACGAAGATCATCCAATTTCTCACCGGCGTTGGCAAGTTCGC
TGTTGACTCTACTATCTTCAGCTCTCTCAAGCCCATCTCCGGTAAGAATCAGGCACATAAGATTGGGCAGGGAGGAATAAAGGAAACGCCCCATTCATCCTCTTTAAATG
AAAAGAAGCCAGAAGAGCTTAAACTAGTGATGGATAAGATGCAGGCAGAGATAGAGGAAACAGAGGGGCACAAGAATAAAATGAAGCAGCACCATTGTACATCTGCAGAG
GTTGTTGATGACTCTGAACCACTAAAGAAGTTGCCAGGGGAAGGTGCCAAAGGATCAGCCAATGTAACCGAAAACAGGAAAAGGATCTTCATCCGATCCCGACTAATAGC
AAGAATAATGGATTCCTTTCTTGACAAGGCTTCTGTTAAGCTCCACGAGGTTCTCTTCTCGTCACAATTTCCAAAAGCAGAGCACCGAACCATGGCGGCATGGACGACGG
CAGCTCGCCGCATAGTTCCGTCTCACAAGCCAGTTTCTACGGCTCAAATCGCCTCTCTAACTCATCGGCGCGGTTTCGCCGCCGGTGGCGATCATCATGGACCTTCGAAG
GTGAACTTTTGGGAGGATCCATTTAATCCATCCAGATGGAAAGGAGAACATTTTGTGATTGTGTCTTTGACTGGATGGGGTTTAGTTCTTTATGGGGCCTACGAGTTCTT
CACTAAAGGCAGGAAGGAAGAGAAAGTTGGAGATGGAAAACACTAGACTCTCGGGTTTTCAAGACAGGATCCGTAAGTATATAATAATAAAACAATCCAGAAACGTTCCT
TTTCCAATATGTGAAGCAAACAAGCCAAGAGTTTATGTTATAGTCCATCAGTCTTTTATTAGTTACACAGTAAAGATTATTGTACCTTAGACTTATTTGTGTCAAAATCA
ATATACAAAGTGAAGACATCTCACAAATTCCTA
Protein sequenceShow/hide protein sequence
MDDVVGNNRIRNLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKPISGKNQAHKIGQGGIKETPHSSSLNEKKPEELKLVMDKMQAEIEETEGHKNKMKQHHCTSAE
VVDDSEPLKKLPGEGAKGSANVTENRKRIFIRSRLIARIMDSFLDKASVKLHEVLFSSQFPKAEHRTMAAWTTAARRIVPSHKPVSTAQIASLTHRRGFAAGGDHHGPSK
VNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGRKEEKVGDGKH