CuGenDBv2

Gene ID	Clc10G06410
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	plant intracellular Ras-group-related LRR protein 6
Genome location	ClcChr10:8668545..8670302
RNA-Seq Expression	Clc10G06410
Synteny	Clc10G06410
Gene Ontology terms	NA
InterPro domains	IPR032675 - Leucine-rich repeat domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

TYK23805.1 plant intracellular Ras-group-related LRR protein 6 [Cucumis melo var. makuwa]

1.3e-36

68.22

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Query:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q
        +ELSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L     P+++ +  +L++    +NKIKDWPGAILK+LPNL CLKLDNNPLK             Q
Subjt:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q

Query:  VLDLSGNIASLPEHPTFSSVPLLQELYVR
        VLDLSGNIA LPEHPTFSS+PLLQELY+R
Subjt:  VLDLSGNIASLPEHPTFSSVPLLQELYVR

XP_008452268.1 PREDICTED: plant intracellular Ras-group-related LRR protein 6 [Cucumis melo]

1.3e-36

68.22

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Query:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q
        +ELSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L     P+++ +  +L++    +NKIKDWPGAILK+LPNL CLKLDNNPLK             Q
Subjt:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q

Query:  VLDLSGNIASLPEHPTFSSVPLLQELYVR
        VLDLSGNIA LPEHPTFSS+PLLQELY+R
Subjt:  VLDLSGNIASLPEHPTFSSVPLLQELYVR

XP_023552345.1 plant intracellular Ras-group-related LRR protein 6 [Cucurbita pepo subsp. pepo]

3.9e-36

68.22

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Query:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q
        +ELSLEGQGLSAVPSEVWE SELMKL+LSKNSLQ+L     P+++ +  +L+     +NKIKDWPGAILKSLPNLMCLKLDNNPLK             Q
Subjt:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q

Query:  VLDLSGNIASLPEHPTFSSVPLLQELYVR
        VLDLSGNI SLPEHPTFSS+PLL+ELY+R
Subjt:  VLDLSGNIASLPEHPTFSSVPLLQELYVR

XP_038905186.1 plant intracellular Ras-group-related LRR protein 6 isoform X1 [Benincasa hispida]

4.6e-37

68.99

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Query:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q
        ++LSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L     P+++ +  +L+     +NKIKDWPGAILKSLPNL+CLKLDNNPLK             Q
Subjt:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q

Query:  VLDLSGNIASLPEHPTFSSVPLLQELYVR
        VLDLSGNIASLPEHPTFSS+PLLQELY+R
Subjt:  VLDLSGNIASLPEHPTFSSVPLLQELYVR

XP_038905189.1 plant intracellular Ras-group-related LRR protein 6 isoform X2 [Benincasa hispida]

4.6e-37

68.99

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Query:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q
        ++LSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L     P+++ +  +L+     +NKIKDWPGAILKSLPNL+CLKLDNNPLK             Q
Subjt:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q

Query:  VLDLSGNIASLPEHPTFSSVPLLQELYVR
        VLDLSGNIASLPEHPTFSS+PLLQELY+R
Subjt:  VLDLSGNIASLPEHPTFSSVPLLQELYVR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L2M1 Uncharacterized protein

4.2e-36

67.44

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Query:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q
        +ELSLEGQGLSAVPSEVWESSELMKL+LSKNS Q+L     P+++ +  +L+     +NKIKDWPGAILK+LPNL CLKLDNNPLK             Q
Subjt:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q

Query:  VLDLSGNIASLPEHPTFSSVPLLQELYVR
        VLDLSGNIA LPEHPTFSS+PLLQELY+R
Subjt:  VLDLSGNIASLPEHPTFSSVPLLQELYVR

A0A1S3BTH8 plant intracellular Ras-group-related LRR protein 6

6.5e-37

68.22

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Query:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q
        +ELSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L     P+++ +  +L++    +NKIKDWPGAILK+LPNL CLKLDNNPLK             Q
Subjt:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q

Query:  VLDLSGNIASLPEHPTFSSVPLLQELYVR
        VLDLSGNIA LPEHPTFSS+PLLQELY+R
Subjt:  VLDLSGNIASLPEHPTFSSVPLLQELYVR

A0A5D3DJP1 Plant intracellular Ras-group-related LRR protein 6

6.5e-37

68.22

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Query:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q
        +ELSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L     P+++ +  +L++    +NKIKDWPGAILK+LPNL CLKLDNNPLK             Q
Subjt:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q

Query:  VLDLSGNIASLPEHPTFSSVPLLQELYVR
        VLDLSGNIA LPEHPTFSS+PLLQELY+R
Subjt:  VLDLSGNIASLPEHPTFSSVPLLQELYVR

A0A6J1CM00 plant intracellular Ras-group-related LRR protein 6

2.7e-35

65.89

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Query:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q
        +ELSLEGQGLS VPSEVWES ELMKL+LSKNS+Q+L     P+++ +  +L+     +NKIKDWPGAILKSLPNL+CLKLDNNPLK             Q
Subjt:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q

Query:  VLDLSGNIASLPEHPTFSSVPLLQELYVR
        VLDLS NI SLPEHPTFSS+PLLQELY+R
Subjt:  VLDLSGNIASLPEHPTFSSVPLLQELYVR

A0A6J1ENG2 plant intracellular Ras-group-related LRR protein 6

1.2e-35

68.22

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Query:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q
        +ELSLEGQGLSAVPSEVWE SELMKL+LSKNSLQ+L     P ++ +  +L+     +NKIKDWPGAILKSLPNLMCLKLDNNPLK             Q
Subjt:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q

Query:  VLDLSGNIASLPEHPTFSSVPLLQELYVR
        VLDLSGNI SLPEHPTFSS+PLL+ELY+R
Subjt:  VLDLSGNIASLPEHPTFSSVPLLQELYVR

SwissProt top hits

e value

%identity

Alignment

Q6K7R2 Plant intracellular Ras-group-related LRR protein 6

4.1e-20

42.14

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Query:  IMLGLRELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKVKNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------
        + L  +EL L G G+++VP   WE++++MKL+LSKNS++DL   ++ +       +   NKIK WPG +  SL +L  LKLDNNPL              
Subjt:  IMLGLRELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKVKNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------

Query:  QVLDLSGNIASLPEHPTFSSVPLLQELYVRLVHKKLGYFP
        +VLDLSG+ +SLPE    S +P L+ELY+R    KL  FP
Subjt:  QVLDLSGNIASLPEHPTFSSVPLLQELYVRLVHKKLGYFP

Q8TCA0 Leucine-rich repeat-containing protein 20

9.2e-04

39.53

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Query:  LRELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPL
        LREL LEG  L  +PSEV     L  ++LS+N  QD      P Q+ A  AL+     +N+I D P   L ++P L  + L  NPL
Subjt:  LRELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPL

Arabidopsis top hits

e value

%identity

Alignment

AT3G15410.1 Leucine-rich repeat (LRR) family protein

2.6e-30

55.47

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Query:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q
        +ELSLEG  LS VPSEVWES E+ K+NLSKNS+++L     P Q+   ++L+     +NKIKDWPGAILKSLPNLMCLKLDNNPL              Q
Subjt:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q

Query:  VLDLSGNIASLPEHPTFSSVPLLQELYV
        +LDLS N  S  EHP F  +P L+ELY+
Subjt:  VLDLSGNIASLPEHPTFSSVPLLQELYV

AT3G15410.2 Leucine-rich repeat (LRR) family protein

2.6e-30

55.47

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Query:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q
        +ELSLEG  LS VPSEVWES E+ K+NLSKNS+++L     P Q+   ++L+     +NKIKDWPGAILKSLPNLMCLKLDNNPL              Q
Subjt:  RELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKV----KNKIKDWPGAILKSLPNLMCLKLDNNPLK-------------Q

Query:  VLDLSGNIASLPEHPTFSSVPLLQELYV
        +LDLS N  S  EHP F  +P L+ELY+
Subjt:  VLDLSGNIASLPEHPTFSSVPLLQELYV

Sequences

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CDS sequence

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ATGTATGTCTCATTCAGGGAAGCATTAACAGTACTGGAAGAAAAGAAATCATGGATCATAGTCATAATGTTGGGCTTAAGAGAGCTTTCTCTAGAAGGGCAAGGGCTAAG
TGCTGTGCCATCAGAAGTTTGGGAATCCAGTGAACTCATGAAACTTAATCTGTCAAAGAATTCCCTCCAGGATCTGACTTTGCCTAAAATACCGATTCAGATGGATGCAG
GATTAGCTCTGAAAGTCAAGAACAAGATTAAAGATTGGCCAGGTGCAATTCTCAAGTCGCTACCTAATCTCATGTGTTTAAAGCTGGACAATAATCCACTTAAACAGGTT
TTAGATCTTAGTGGCAATATAGCTTCCTTGCCAGAGCACCCAACATTTTCCAGCGTACCACTTCTGCAAGAGCTTTACGTAAGGCTAGTTCACAAGAAACTGGGATATTT
TCCAGCCCTCCAAGATTCTTGTCATACTTACTTGTGCCGTGTTCTTATGTATTAA

mRNA sequence

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Protein sequence

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MYVSFREALTVLEEKKSWIIVIMLGLRELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLTLPKIPIQMDAGLALKVKNKIKDWPGAILKSLPNLMCLKLDNNPLKQV
LDLSGNIASLPEHPTFSSVPLLQELYVRLVHKKLGYFPALQDSCHTYLCRVLMY

Clc10G06410 (gene) of Watermelon (cordophanus) v2 genome