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Clc10G06470 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G06470
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr10:8750417..8753060
RNA-Seq ExpressionClc10G06470
SyntenyClc10G06470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038877524.1 uncharacterized protein LOC120069782 [Benincasa hispida]2.8e-0950Show/hide
Query:  MRHKPFPHYDELSIVFGRDRVTGDDCETPIDQATEINDHVEDVRLGSQKKKYELEVGRSKEIIE--QIYQVDGLEE
        ++HKPF +YDELSIVFG+DR T +  ETP DQA+  ++H+ED+RLGSQ       V   +E I    I  VDG+ E
Subjt:  MRHKPFPHYDELSIVFGRDRVTGDDCETPIDQATEINDHVEDVRLGSQKKKYELEVGRSKEIIE--QIYQVDGLEE

XP_038887032.1 uncharacterized protein LOC120077200 [Benincasa hispida]7.5e-1055.36Show/hide
Query:  MRHKPFPHYDELSIVFGRDRVTGDDCETPIDQATEINDHVEDVRLGSQKKKYELEV
        +RHKPFPHYDELSIVFG+DR  G+  +TP DQA+  ++H+ED+ LGSQ  + +  +
Subjt:  MRHKPFPHYDELSIVFGRDRVTGDDCETPIDQATEINDHVEDVRLGSQKKKYELEV

XP_038889264.1 uncharacterized protein At2g29880-like [Benincasa hispida]8.3e-0962.5Show/hide
Query:  MRHKPFPHYDELSIVFGRDRVTGDDCETPIDQATEINDHVEDVRLGSQ
        +RHKPFPH DELSIVFG+DR T +  +TP DQA+  ++H+ED+RL SQ
Subjt:  MRHKPFPHYDELSIVFGRDRVTGDDCETPIDQATEINDHVEDVRLGSQ

XP_038895773.1 uncharacterized protein LOC120083935 [Benincasa hispida]8.0e-1243.69Show/hide
Query:  MRHKPFPHYDELSIVFGRDRVTGDDCETPIDQATEINDHVED-VRLGS-----------------QKKKYELEVGRSKEIIEQIYQVDGLEEADRLALID
        M +KPFPHYD+LS VFG+ +  G   E P    T      ED +RLGS                 QK+KYELE GR KE++  IY +DGL+E D++ LID
Subjt:  MRHKPFPHYDELSIVFGRDRVTGDDCETPIDQATEINDHVED-VRLGS-----------------QKKKYELEVGRSKEIIEQIYQVDGLEEADRLALID

Query:  LAI
        L +
Subjt:  LAI

XP_038896380.1 uncharacterized protein LOC120084641 [Benincasa hispida]9.5e-0534.09Show/hide
Query:  MRHKPFPHYDELSIVFGRDRV---TGDDC------------ETPIDQAT----------------------EINDHVEDV---------RLGS-QKKKYE
        M +K F HYD+LS VFG+DR    T + C            E P +Q+T                      E+ D +            RL S QK+KYE
Subjt:  MRHKPFPHYDELSIVFGRDRV---TGDDC------------ETPIDQAT----------------------EINDHVEDV---------RLGS-QKKKYE

Query:  LEVGRSKEIIEQIYQVDGLEEADRLALIDLAI
        LE GR KE++  IY +DGL+E D++  IDL +
Subjt:  LEVGRSKEIIEQIYQVDGLEEADRLALIDLAI

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCATAAACCATTCCCACACTATGATGAACTTTCCATCGTGTTTGGAAGGGATAGGGTTACAGGTGATGATTGTGAAACCCCTATTGATCAAGCAACTGAG
ATAAATGACCATGTGGAGGATGTTAGGTTGGGATCACAGAAGAAGAAATATGAACTGGAAGTTGGAAGGAGCAAGGAGATTATCGAACAGATATACCAGGTGGAT
GGTTTGGAGGAAGCTGACCGGTTGGCCCTCATAGATTTGGCGATTAGAATTCGATCAGGCTTGTCGCACAATCGTTTAGCGAGACATAAAGTTGCGATTGTGATA
GTTGGTATCAGAGCCAAGTCGGCTCATAAAAGAGAAGGCCAGAACCATGTCGACCACGAAACAACTAAACAAGTCCCAAACGGACCGACTGGTAGAGATAGGAGA
GTAGATGCTCTACTTGAGAGAAGTTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCATAAACCATTCCCACACTATGATGAACTTTCCATCGTGTTTGGAAGGGATAGGGTTACAGGTGATGATTGTGAAACCCCTATTGATCAAGCAACTGAG
ATAAATGACCATGTGGAGGATGTTAGGTTGGGATCACAGAAGAAGAAATATGAACTGGAAGTTGGAAGGAGCAAGGAGATTATCGAACAGATATACCAGGTGGAT
GGTTTGGAGGAAGCTGACCGGTTGGCCCTCATAGATTTGGCGATTAGAATTCGATCAGGCTTGTCGCACAATCGTTTAGCGAGACATAAAGTTGCGATTGTGATA
GTTGGTATCAGAGCCAAGTCGGCTCATAAAAGAGAAGGCCAGAACCATGTCGACCACGAAACAACTAAACAAGTCCCAAACGGACCGACTGGTAGAGATAGGAGA
GTAGATGCTCTACTTGAGAGAAGTTACTGA
Protein sequenceShow/hide protein sequence
MRHKPFPHYDELSIVFGRDRVTGDDCETPIDQATEINDHVEDVRLGSQKKKYELEVGRSKEIIEQIYQVDGLEEADRLALIDLAIRIRSGLSHNRLARHKVAIVI
VGIRAKSAHKREGQNHVDHETTKQVPNGPTGRDRRVDALLERSY