; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G06860 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G06860
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEnzymatic polyprotein
Genome locationClcChr10:9483890..9484322
RNA-Seq ExpressionClc10G06860
SyntenyClc10G06860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050445.1 hypothetical protein E6C27_scaffold175G00510 [Cucumis melo var. makuwa]1.9e-2045.07Show/hide
Query:  DQYLQLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCL
        D   +  P+YNQ NV +   DK+ + + YS YID +I  P E R  F+   D +K + + E A+            ++AM++   +W T S KEI S   
Subjt:  DQYLQLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCL

Query:  REKESYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ
         EKE+YFPHP  PAIKMVSSP+K I+E+KVQ+VGVRE+KNIQ
Subjt:  REKESYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ

KAA0066201.1 Enzymatic polyprotein [Cucumis melo var. makuwa]2.0e-2245.07Show/hide
Query:  DQYLQLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCL
        D   +  P+YNQ NV +S  D   +++ YS+Y+D+++A P E R  F+   D I  L+++E A+            ++AM++   VW T   KEI S+  
Subjt:  DQYLQLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCL

Query:  REKESYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ
         E E+YF HPI+PAIKMVSSP+K IDE KVQ+VGVRE+KNIQ
Subjt:  REKESYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ

TYJ98087.1 Enzymatic polyprotein [Cucumis melo var. makuwa]4.3e-2044.37Show/hide
Query:  DQYLQLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCL
        D   +  P+YNQ NV + E  K+ + + YS YID +I  P E R  F+   D I+ + + E A+            +IAM++   VW T S KE+ S+  
Subjt:  DQYLQLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCL

Query:  REKESYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ
         E+E+YFPHP +PAIKM+SSP+K I+E+KVQ+VGVRE+KNIQ
Subjt:  REKESYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ

TYK01213.1 Enzymatic polyprotein [Cucumis melo var. makuwa]2.0e-2245.07Show/hide
Query:  DQYLQLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCL
        D   +  P+YNQ NV +S  D   +++ YS+Y+D+++A P E R  F+   D I  L+++E A+            ++AM++   VW T   KEI S+  
Subjt:  DQYLQLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCL

Query:  REKESYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ
         E E+YF HPI+PAIKMVSSP+K IDE KVQ+VGVRE+KNIQ
Subjt:  REKESYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ

TYK16376.1 hypothetical protein E5676_scaffold21G001690 [Cucumis melo var. makuwa]1.9e-2040.58Show/hide
Query:  QLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCLREKE
        ++ P+YNQ NV +S  +   +++ YS+Y+D+++  P E R  F+   D I  ++++E +R            ++ M++  +VW T   KEI S+   E+E
Subjt:  QLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCLREKE

Query:  SYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ
        +YFPH ++PAIKMVSS +K ID++KVQ+VGVRE+KNIQ
Subjt:  SYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ

TrEMBL top hitse value%identityAlignment
A0A5A7UA27 Uncharacterized protein9.3e-2145.07Show/hide
Query:  DQYLQLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCL
        D   +  P+YNQ NV +   DK+ + + YS YID +I  P E R  F+   D +K + + E A+            ++AM++   +W T S KEI S   
Subjt:  DQYLQLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCL

Query:  REKESYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ
         EKE+YFPHP  PAIKMVSSP+K I+E+KVQ+VGVRE+KNIQ
Subjt:  REKESYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ

A0A5A7VKK8 Enzymatic polyprotein9.9e-2345.07Show/hide
Query:  DQYLQLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCL
        D   +  P+YNQ NV +S  D   +++ YS+Y+D+++A P E R  F+   D I  L+++E A+            ++AM++   VW T   KEI S+  
Subjt:  DQYLQLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCL

Query:  REKESYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ
         E E+YF HPI+PAIKMVSSP+K IDE KVQ+VGVRE+KNIQ
Subjt:  REKESYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ

A0A5D3BG41 Enzymatic polyprotein2.1e-2044.37Show/hide
Query:  DQYLQLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCL
        D   +  P+YNQ NV + E  K+ + + YS YID +I  P E R  F+   D I+ + + E A+            +IAM++   VW T S KE+ S+  
Subjt:  DQYLQLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCL

Query:  REKESYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ
         E+E+YFPHP +PAIKM+SSP+K I+E+KVQ+VGVRE+KNIQ
Subjt:  REKESYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ

A0A5D3BN76 Enzymatic polyprotein9.9e-2345.07Show/hide
Query:  DQYLQLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCL
        D   +  P+YNQ NV +S  D   +++ YS+Y+D+++A P E R  F+   D I  L+++E A+            ++AM++   VW T   KEI S+  
Subjt:  DQYLQLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCL

Query:  REKESYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ
         E E+YF HPI+PAIKMVSSP+K IDE KVQ+VGVRE+KNIQ
Subjt:  REKESYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ

A0A5D3D130 Uncharacterized protein9.3e-2140.58Show/hide
Query:  QLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCLREKE
        ++ P+YNQ NV +S  +   +++ YS+Y+D+++  P E R  F+   D I  ++++E +R            ++ M++  +VW T   KEI S+   E+E
Subjt:  QLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKD-IKALQEREAARK----------NKIAMLQEPLVWTTNSRKEIISDCLREKE

Query:  SYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ
        +YFPH ++PAIKMVSS +K ID++KVQ+VGVRE+KNIQ
Subjt:  SYFPHPIVPAIKMVSSPFKAIDEEKVQQVGVREMKNIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAGCTGAGGGATCAATATCTCCAACTCAGTCCTATCTACAATCAAAACAATGTCTTTACTTCCGAAACAGATAAGCAAACGTACGAACAGGAGTATAGCCAATA
CATAGACTTATATATTGCCCAACCAAAAGAAGAAAGGGGCATATTCATTTTCAAAAAGGACATCAAAGCTTTGCAAGAGAGGGAAGCAGCCCGAAAAAACAAAATCGCAA
TGCTTCAAGAACCTCTTGTTTGGACAACAAATAGCAGAAAAGAAATAATTTCTGATTGTCTGCGTGAAAAGGAATCTTATTTTCCTCATCCAATTGTTCCAGCCATCAAA
ATGGTATCTTCTCCTTTCAAAGCAATAGATGAGGAGAAAGTTCAGCAGGTTGGAGTTCGAGAAATGAAGAATATCCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAGCTGAGGGATCAATATCTCCAACTCAGTCCTATCTACAATCAAAACAATGTCTTTACTTCCGAAACAGATAAGCAAACGTACGAACAGGAGTATAGCCAATA
CATAGACTTATATATTGCCCAACCAAAAGAAGAAAGGGGCATATTCATTTTCAAAAAGGACATCAAAGCTTTGCAAGAGAGGGAAGCAGCCCGAAAAAACAAAATCGCAA
TGCTTCAAGAACCTCTTGTTTGGACAACAAATAGCAGAAAAGAAATAATTTCTGATTGTCTGCGTGAAAAGGAATCTTATTTTCCTCATCCAATTGTTCCAGCCATCAAA
ATGGTATCTTCTCCTTTCAAAGCAATAGATGAGGAGAAAGTTCAGCAGGTTGGAGTTCGAGAAATGAAGAATATCCAATAG
Protein sequenceShow/hide protein sequence
MKELRDQYLQLSPIYNQNNVFTSETDKQTYEQEYSQYIDLYIAQPKEERGIFIFKKDIKALQEREAARKNKIAMLQEPLVWTTNSRKEIISDCLREKESYFPHPIVPAIK
MVSSPFKAIDEEKVQQVGVREMKNIQ