CuGenDBv2

Gene ID	Clc10G06865
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Enzymatic polyprotein
Genome location	ClcChr10:9484433..9485076
RNA-Seq Expression	Clc10G06865
Synteny	Clc10G06865
Gene Ontology terms	NA
InterPro domains	IPR028919 - Viral movement protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0041674.1 movement protein [Cucumis melo var. makuwa]

2.9e-40

60.38

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Query:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD
        MK+EFT I LL  E +                   +PLFREGLDV VYLALRDKRHLR   SLLGIVQSNLE GPV+F+ RPD+T+SL+D NI+DT+ LD
Subjt:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD

Query:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPR
                    LPF V YR+Y+KLM+TNLSPKAL ISPKGYTMLMEVN+EKSS+T+PR
Subjt:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPR

KAA0054118.1 uncharacterized protein E6C27_scaffold131G00290 [Cucumis melo var. makuwa]

7.5e-44

52.8

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Query:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD
        MKDEFT I LL  E +                   +PLFREGLDV VYLALRDKRHLR   SLLGIVQSNLE GPV+F+ RP++T+SL D NI+DT+ LD
Subjt:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD

Query:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPRICGGMNSLKILYGVWKKQ----QLRLDDKVPQLRLPNILME
                    LPF V YR+Y+KLM+TNLSPK L +SPKGYTMLMEVN+EKSS+T+PR        K    VWK Q     ++   + PQ  LPN LME
Subjt:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPRICGGMNSLKILYGVWKKQ----QLRLDDKVPQLRLPNILME

Query:  KLKFNFILSQDIPR
          KFN I    IP+
Subjt:  KLKFNFILSQDIPR

KAA0059217.1 Enzymatic polyprotein [Cucumis melo var. makuwa]

5.0e-40

60.38

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Query:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD
        MKDEFT I LL  E +                   +PLFREGLDV VYLALRDKRHLR   SLLGIVQSNLE GPV+F+ RP +T+SL+D NI+DT+ LD
Subjt:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD

Query:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPR
                    LPF V YR+Y+KLM+TNLSPKAL ISPKGYTMLMEVN+EKSS+T+PR
Subjt:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPR

TYJ98087.1 Enzymatic polyprotein [Cucumis melo var. makuwa]

5.0e-40

60.38

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Query:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD
        MKDEFT I LL  E +                   +PLFREGLDV VYLALRDKRHLR   SLLGIVQSNLE GPV+F+ RP +T+SL+D NI+DT+ LD
Subjt:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD

Query:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPR
                    LPF V YR+Y+KLM+TNLSPKAL ISPKGYTMLMEVN+EKSS+T+PR
Subjt:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPR

XP_038904487.1 uncharacterized protein LOC120090856 [Benincasa hispida]

1.1e-42

50.46

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Query:  MKDEFTEINLLSRELIAQ------------------PLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD
        MKDEFTEI++LSRE I Q                  PLFREGL+V VYLA RDKRHLR   S+LGI+QSNLE GPV+F ++P   ISL+DAN+ D + LD
Subjt:  MKDEFTEINLLSRELIAQ------------------PLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD

Query:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPRICGGMNSLKILYGVWK--KQQLRLDDKVPQLRLPNILMEKL
                    LPF V YRVY+KL++T +SP+AL ISPKG TMLMEVN+EKSS+TVP++       + L  VW+       + +K   LR  + +ME L
Subjt:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPRICGGMNSLKILYGVWK--KQQLRLDDKVPQLRLPNILMEKL

Query:  KFNFILSQDIPRFKRL
        KF+ I +QDIPRF +L
Subjt:  KFNFILSQDIPRFKRL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UGF0 Uncharacterized protein

3.6e-44

52.8

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Query:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD
        MKDEFT I LL  E +                   +PLFREGLDV VYLALRDKRHLR   SLLGIVQSNLE GPV+F+ RP++T+SL D NI+DT+ LD
Subjt:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD

Query:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPRICGGMNSLKILYGVWKKQ----QLRLDDKVPQLRLPNILME
                    LPF V YR+Y+KLM+TNLSPK L +SPKGYTMLMEVN+EKSS+T+PR        K    VWK Q     ++   + PQ  LPN LME
Subjt:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPRICGGMNSLKILYGVWKKQ----QLRLDDKVPQLRLPNILME

Query:  KLKFNFILSQDIPR
          KFN I    IP+
Subjt:  KLKFNFILSQDIPR

A0A5A7UX67 Enzymatic polyprotein

2.4e-40

60.38

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Query:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD
        MKDEFT I LL  E +                   +PLFREGLDV VYLALRDKRHLR   SLLGIVQSNLE GPV+F+ RP +T+SL+D NI+DT+ LD
Subjt:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD

Query:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPR
                    LPF V YR+Y+KLM+TNLSPKAL ISPKGYTMLMEVN+EKSS+T+PR
Subjt:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPR

A0A5D3BEY3 Enzymatic polyprotein

2.4e-40

60.38

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Query:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD
        MKDEFT I LL  E +                   +PLFREGLDV VYLALRDKRHLR   SLLGIVQSNLE GPV+F+ RP +T+SL+D NI+DT+ LD
Subjt:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD

Query:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPR
                    LPF V YR+Y+KLM+TNLSPKAL ISPKGYTMLMEVN+EKSS+T+PR
Subjt:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPR

A0A5D3BG41 Enzymatic polyprotein

2.4e-40

60.38

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Query:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD
        MKDEFT I LL  E +                   +PLFREGLDV VYLALRDKRHLR   SLLGIVQSNLE GPV+F+ RP +T+SL+D NI+DT+ LD
Subjt:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD

Query:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPR
                    LPF V YR+Y+KLM+TNLSPKAL ISPKGYTMLMEVN+EKSS+T+PR
Subjt:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPR

A0A5D3C4I7 Movement protein

1.4e-40

60.38

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Query:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD
        MK+EFT I LL  E +                   +PLFREGLDV VYLALRDKRHLR   SLLGIVQSNLE GPV+F+ RPD+T+SL+D NI+DT+ LD
Subjt:  MKDEFTEINLLSRELI------------------AQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLD

Query:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPR
                    LPF V YR+Y+KLM+TNLSPKAL ISPKGYTMLMEVN+EKSS+T+PR
Subjt:  ------------LPFVVLYRVYYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPR

SwissProt top hits

e value

%identity

Alignment

P09520 Movement protein

2.7e-04

28.95

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Query:  MKDEFTEINLLSRELIAQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRL-------------DLPFVV
        ++ + + I+L + +++    FR+G+D  V +AL D R +    SLLG  + NL  G   F+  P   +SL+  N+  TL               D  F V
Subjt:  MKDEFTEINLLSRELIAQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRL-------------DLPFVV

Query:  LYRVYYKLMNTNLS
         Y + Y L N++ S
Subjt:  LYRVYYKLMNTNLS

Q6XKE6 Genome polyprotein

4.6e-04

23.2

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Query:  EFTEINLLSRELIAQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLDLPF------------VVLYRV
        +FT I+  + ++      R+G  V+  LAL D R+L    + LG  +  L  G VF +  P+ T+SL DAN+   L++ +               + Y++
Subjt:  EFTEINLLSRELIAQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLDLPF------------VVLYRV

Query:  YYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPRICGGMNSLKILYGVWKKQQLRLDDKVPQLRLPNILMEKLKFNFI-LSQDIPRFKRL
         +++ N  +           +  +   N       VPR     + +KIL   W     +L +    LR   + M K     + +S D   +K+L
Subjt:  YYKLMNTNLSPKALRISPKGYTMLMEVNLEKSSITVPRICGGMNSLKILYGVWKKQQLRLDDKVPQLRLPNILMEKLKFNFI-LSQDIPRFKRL

Q91DM0 Genome polyprotein

2.7e-04

23.62

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Query:  EFTEINLLSRELIAQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLDLPF------------VVLYRV
        +FT I+  + ++      R+G  V+  LAL D R+L    + LG  +  L  G VF +  P+ T+SL DAN+   L++ +               + Y++
Subjt:  EFTEINLLSRELIAQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLDLPF------------VVLYRV

Query:  YYKLMNTNLSPKALRISPKGYTMLMEVNLEKSS-----ITVPRICGGMNSLKILYGVWKKQQLRLDDKVPQLRLPNILMEKLKFNFI-LSQDIPRFKRL
         +++ N      A+ ++  G    + + ++  S       VPR     + +KIL   W     +L +    LR   + M K     + +S D   +K+L
Subjt:  YYKLMNTNLSPKALRISPKGYTMLMEVNLEKSS-----ITVPRICGGMNSLKILYGVWKKQQLRLDDKVPQLRLPNILMEKLKFNFI-LSQDIPRFKRL

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGAAGGATGAATTCACAGAAATCAACCTTCTATCAAGAGAATTAATTGCTCAACCACTCTTTAGAGAAGGATTAGACGTTCTAGTCTACCTTGCGCTCAGAGACAAAAG
ACATCTGAGATTGTTGCAATCTCTTTTAGGTATTGTTCAATCAAATTTAGAAAATGGTCCAGTCTTTTTCTCTTACAGACCTGACATCACCATTTCCTTAAAAGATGCAA
ACATCTTGGACACTTTAAGGCTCGATCTTCCTTTTGTGGTTCTTTATCGAGTCTATTACAAATTGATGAATACAAATCTCTCTCCAAAAGCCCTTAGGATCTCTCCTAAA
GGTTATACTATGCTCATGGAAGTCAATCTTGAGAAGTCCTCTATAACTGTACCCCGAATTTGCGGTGGGATGAACTCACTCAAAATCCTGTATGGAGTATGGAAAAAACA
ACAACTCCGGTTAGACGACAAAGTACCGCAGCTACGGTTACCGAACATCCTGATGGAAAAGTTGAAGTTCAATTTCATTTTGAGCCAAGATATCCCAAGATTCAAGAGAT
TATGA

mRNA sequence

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Protein sequence

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MKDEFTEINLLSRELIAQPLFREGLDVLVYLALRDKRHLRLLQSLLGIVQSNLENGPVFFSYRPDITISLKDANILDTLRLDLPFVVLYRVYYKLMNTNLSPKALRISPK
GYTMLMEVNLEKSSITVPRICGGMNSLKILYGVWKKQQLRLDDKVPQLRLPNILMEKLKFNFILSQDIPRFKRL

Clc10G06865 (gene) of Watermelon (cordophanus) v2 genome