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Clc10G07510 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G07510
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDNA-directed RNA polymerase subunit beta
Genome locationClcChr10:12027289..12032798
RNA-Seq ExpressionClc10G07510
SyntenyClc10G07510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
A4QJA7 DNA-directed RNA polymerase subunit beta1.7e-05100Show/hide
Query:  QIGSKENAILEFYQQFSCVGGDP
        QIGSKENAILEFYQQFSCVGGDP
Subjt:  QIGSKENAILEFYQQFSCVGGDP
A4QJJ1 DNA-directed RNA polymerase subunit beta4.9e-0595.65Show/hide
Query:  QIGSKENAILEFYQQFSCVGGDP
        +IGSKENAILEFYQQFSCVGGDP
Subjt:  QIGSKENAILEFYQQFSCVGGDP
A4QK10 DNA-directed RNA polymerase subunit beta4.9e-0595.65Show/hide
Query:  QIGSKENAILEFYQQFSCVGGDP
        +IGSKENAILEFYQQFSCVGGDP
Subjt:  QIGSKENAILEFYQQFSCVGGDP
P50546 DNA-directed RNA polymerase subunit beta4.9e-0595.65Show/hide
Query:  QIGSKENAILEFYQQFSCVGGDP
        +IGSKENAILEFYQQFSCVGGDP
Subjt:  QIGSKENAILEFYQQFSCVGGDP
P60282 DNA-directed RNA polymerase subunit beta4.9e-0595.65Show/hide
Query:  QIGSKENAILEFYQQFSCVGGDP
        +IGSKENAILEFYQQFSCVGGDP
Subjt:  QIGSKENAILEFYQQFSCVGGDP
Arabidopsis top hitse value%identityAlignment
ATCG00190.1 RNA polymerase subunit beta3.5e-0695.65Show/hide
Query:  QIGSKENAILEFYQQFSCVGGDP
        +IGSKENAILEFYQQFSCVGGDP
Subjt:  QIGSKENAILEFYQQFSCVGGDP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCATTATGTTCCAATACACAACTACACAACCAACTCCTTACTCCTTGTCCTGTAGTGAACCAAGTCTGCCCTCTTTTGATTGTTGGGCCCCACCCATGGAGTTT
CTTTGTTCACTGGAATAAGCGGATTAACCGCACTCTGGGATCGATAAGTGAGTTGGCTTCCCCTTGGATCCATTGCCAAGTTTGGTCTTTCCCCAATCCTGTATGGAAGG
AATTCCCCCCAGGGTTCGACGATTGGGTTAACCTTCCTCCCCAAAGGGGTCAGTTTGTCCACGTCACTAAGCGGGATCCCTTTAGTTTGATTCCAACTCCACAAGTTCTT
TTGCTTTGGCGTCTGGCCTCTCCGATTAGAAGGTTTACTAAAAGGCAAGGAGTAAGGAAAGACTTGAAATGCTTCACAAAATGTTGTGGCAATTTGGACTACAAGATGTC
TGATGGGGTCTTAGCTCGGTGCCTTGGCGTTGAAGAAGCAGCAAAGAGACTTGAACTTCAAATTGGATCAAAAGAAAATGCCATTTTGGAGTTTTATCAACAATTTTCTT
GTGTAGGCGGAGATCCGTCAAAATCAAGCAAAGGTAGAGCGGAGCTCAACGCTACTCAACGTCGATTATCCTTAGCTGTGTGGAGTAATCTCAATACATCAGCGTCGTAC
ATTCCTCAATATACACTTAGGTATCATAATCCGGTTTGCCCATATGCCTTCTCCGAGTCCTTGAGCATTGGGGTCCCATTTCTATATCCAGGTTACTATTCGCCTTCTTC
AAGTCCTTCAGCATTGGTACCTTTTCTAAACTCAGGCTACCCATTGGCCTTCTCCGAGTCCTTGGGCTTTGGGTGCCATTTCAAAGATTTTACAAATACTCAACGTGTTT
TGAAAACATCATATTATAAATTCCGAGACCCAGCGATACCCAGAGAGAATTGTGAGATGCAAAGGCTTCTAGCAACACCTGCGTTACCTGTCTCGCTTCTCACGCTTAAA
TTCTTAGCATTACTTGCAGTCCAGCAATACTTATCTTCCACAGCTTCTGCCTTCCCTCTTATTCTCACTTCTATCTGTTACAAATCTTTTCCTATCTCTTCTTGGCCTGC
AAAAGAAGTATGCCTTGCGTTAATCAACATTAAATTCCTTTCCTTTTCTTTACTGACTTATAAACGAGAACCTCAGCGATACCCGCCGAATAAGACTGTTACTAGCGATA
CTCGATGGAACAACACCAGCGTTACATACCTTAGCAGCGATACTCAGCGTTATCTAGCGAGATCTGTGAGACGAAAGGTCCCTTTGAGTCTCAGCGATACCCGTCTCGCT
ACCAATTCCCAGACAATGTGCCGATACTTGATTTTCCAACGGCACTCTGCACTGACTTCTTCTCTTCTGCAAACTTATAGGAAATCACGTTCTATAGCTTACCTTAAAAT
TCCAGGGTGTAGCTCCTCCTCGTTCTTACGATATTCCAGAGTTACCTCCCGCTGTTCCGGATTGCGAGTTGATCTTGCAACCTCTGGTTTCCTAAGGATTCACATAACTT
GCGCAGGGTTCTCCTCTCAACGCACGACACCCAAGCTAACTTCTCTTCCAACGCATGGTGGGCGTCCCCACACGCCTCCTATTTTGAACGCATATCTTTCCATCTTGCGA
TTCTACTTTCGTTGCGTCCAGACCATCCTGTCTTCAGCACAGAAATTCTTACTCTCGCTCTCGGCCACTTCTCCCTTTGAGACGCATAGCCACAACCGCATGGCTACACC
TCAATGCTTGGCAACGCAAATCAGTGCTTACAAGAATTCTGCACGAATTTGCCTTAGACTCCTTCCTCTACCTCTCTTCGTCGCTCAGCTGAAATATAGGATCGATTGGA
GCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCATTATGTTCCAATACACAACTACACAACCAACTCCTTACTCCTTGTCCTGTAGTGAACCAAGTCTGCCCTCTTTTGATTGTTGGGCCCCACCCATGGAGTTT
CTTTGTTCACTGGAATAAGCGGATTAACCGCACTCTGGGATCGATAAGTGAGTTGGCTTCCCCTTGGATCCATTGCCAAGTTTGGTCTTTCCCCAATCCTGTATGGAAGG
AATTCCCCCCAGGGTTCGACGATTGGGTTAACCTTCCTCCCCAAAGGGGTCAGTTTGTCCACGTCACTAAGCGGGATCCCTTTAGTTTGATTCCAACTCCACAAGTTCTT
TTGCTTTGGCGTCTGGCCTCTCCGATTAGAAGGTTTACTAAAAGGCAAGGAGTAAGGAAAGACTTGAAATGCTTCACAAAATGTTGTGGCAATTTGGACTACAAGATGTC
TGATGGGGTCTTAGCTCGGTGCCTTGGCGTTGAAGAAGCAGCAAAGAGACTTGAACTTCAAATTGGATCAAAAGAAAATGCCATTTTGGAGTTTTATCAACAATTTTCTT
GTGTAGGCGGAGATCCGTCAAAATCAAGCAAAGGTAGAGCGGAGCTCAACGCTACTCAACGTCGATTATCCTTAGCTGTGTGGAGTAATCTCAATACATCAGCGTCGTAC
ATTCCTCAATATACACTTAGGTATCATAATCCGGTTTGCCCATATGCCTTCTCCGAGTCCTTGAGCATTGGGGTCCCATTTCTATATCCAGGTTACTATTCGCCTTCTTC
AAGTCCTTCAGCATTGGTACCTTTTCTAAACTCAGGCTACCCATTGGCCTTCTCCGAGTCCTTGGGCTTTGGGTGCCATTTCAAAGATTTTACAAATACTCAACGTGTTT
TGAAAACATCATATTATAAATTCCGAGACCCAGCGATACCCAGAGAGAATTGTGAGATGCAAAGGCTTCTAGCAACACCTGCGTTACCTGTCTCGCTTCTCACGCTTAAA
TTCTTAGCATTACTTGCAGTCCAGCAATACTTATCTTCCACAGCTTCTGCCTTCCCTCTTATTCTCACTTCTATCTGTTACAAATCTTTTCCTATCTCTTCTTGGCCTGC
AAAAGAAGTATGCCTTGCGTTAATCAACATTAAATTCCTTTCCTTTTCTTTACTGACTTATAAACGAGAACCTCAGCGATACCCGCCGAATAAGACTGTTACTAGCGATA
CTCGATGGAACAACACCAGCGTTACATACCTTAGCAGCGATACTCAGCGTTATCTAGCGAGATCTGTGAGACGAAAGGTCCCTTTGAGTCTCAGCGATACCCGTCTCGCT
ACCAATTCCCAGACAATGTGCCGATACTTGATTTTCCAACGGCACTCTGCACTGACTTCTTCTCTTCTGCAAACTTATAGGAAATCACGTTCTATAGCTTACCTTAAAAT
TCCAGGGTGTAGCTCCTCCTCGTTCTTACGATATTCCAGAGTTACCTCCCGCTGTTCCGGATTGCGAGTTGATCTTGCAACCTCTGGTTTCCTAAGGATTCACATAACTT
GCGCAGGGTTCTCCTCTCAACGCACGACACCCAAGCTAACTTCTCTTCCAACGCATGGTGGGCGTCCCCACACGCCTCCTATTTTGAACGCATATCTTTCCATCTTGCGA
TTCTACTTTCGTTGCGTCCAGACCATCCTGTCTTCAGCACAGAAATTCTTACTCTCGCTCTCGGCCACTTCTCCCTTTGAGACGCATAGCCACAACCGCATGGCTACACC
TCAATGCTTGGCAACGCAAATCAGTGCTTACAAGAATTCTGCACGAATTTGCCTTAGACTCCTTCCTCTACCTCTCTTCGTCGCTCAGCTGAAATATAGGATCGATTGGA
GCTTTTGA
Protein sequenceShow/hide protein sequence
MGSLCSNTQLHNQLLTPCPVVNQVCPLLIVGPHPWSFFVHWNKRINRTLGSISELASPWIHCQVWSFPNPVWKEFPPGFDDWVNLPPQRGQFVHVTKRDPFSLIPTPQVL
LLWRLASPIRRFTKRQGVRKDLKCFTKCCGNLDYKMSDGVLARCLGVEEAAKRLELQIGSKENAILEFYQQFSCVGGDPSKSSKGRAELNATQRRLSLAVWSNLNTSASY
IPQYTLRYHNPVCPYAFSESLSIGVPFLYPGYYSPSSSPSALVPFLNSGYPLAFSESLGFGCHFKDFTNTQRVLKTSYYKFRDPAIPRENCEMQRLLATPALPVSLLTLK
FLALLAVQQYLSSTASAFPLILTSICYKSFPISSWPAKEVCLALINIKFLSFSLLTYKREPQRYPPNKTVTSDTRWNNTSVTYLSSDTQRYLARSVRRKVPLSLSDTRLA
TNSQTMCRYLIFQRHSALTSSLLQTYRKSRSIAYLKIPGCSSSSFLRYSRVTSRCSGLRVDLATSGFLRIHITCAGFSSQRTTPKLTSLPTHGGRPHTPPILNAYLSILR
FYFRCVQTILSSAQKFLLSLSATSPFETHSHNRMATPQCLATQISAYKNSARICLRLLPLPLFVAQLKYRIDWSF