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Clc10G07698 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G07698
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCCHC-type domain-containing protein
Genome locationClcChr10:14149434..14153300
RNA-Seq ExpressionClc10G07698
SyntenyClc10G07698
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8702390.1 hypothetical protein F3Y22_tig00110483pilonHSYRG00411 [Hibiscus syriacus]8.6e-2457.98Show/hide
Query:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR-GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV
        +T+++   SLEAHEQRKKKKK+E LE+ALQTK  IK++K    Q+ RG+ RGRGG  +GR G+G  H    +E  Q+SQ NWRGRG+ RGRGG SN+ N+
Subjt:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR-GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV

Query:  ERYNCGKYGHYAKDWYSKK
        E Y C KYGHYAKD  S K
Subjt:  ERYNCGKYGHYAKDWYSKK

KAE8706666.1 hypothetical protein F3Y22_tig00110388pilonHSYRG00007 [Hibiscus syriacus]6.6e-2454.29Show/hide
Query:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGRGRG-RGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV
        +TIDD   SLEAHEQRKKK K E LEEALQ K+ IK++K +  Q+ RGR RGRG  S GRG G R  G   EE  Q+ QQNWRGRG+  GRGG SNH NV
Subjt:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGRGRG-RGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV

Query:  -------------------ERYNCGKYGHYAKDWYSKKKI
                           E YNCGK+GHYAK+ YS+K++
Subjt:  -------------------ERYNCGKYGHYAKDWYSKKKI

KAE8721174.1 hypothetical protein F3Y22_tig00016637pilonHSYRG00095 [Hibiscus syriacus]6.6e-2457.98Show/hide
Query:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR-GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV
        +T+++   SLEAHEQRKKKKK+E LE+ALQTK  IK++K    Q+ RG+ RGRGG  +GR G+G  H    +E  Q+SQ NWRGRG+ RGRGG SN+ N+
Subjt:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR-GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV

Query:  ERYNCGKYGHYAKDWYSKK
        E Y C KYGHYAKD  S K
Subjt:  ERYNCGKYGHYAKDWYSKK

KAE8732752.1 hypothetical protein F3Y22_tig00001732pilonHSYRG00018 [Hibiscus syriacus]1.1e-2357.98Show/hide
Query:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR-GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV
        +TI++   SLEAHEQRKKK+K+E LE+ALQTK  IK++K    Q+ RG+ RGRGG  +GR G+G  H    +E  Q+SQ NWRGRG+ RGRGG SN+ N+
Subjt:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR-GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV

Query:  ERYNCGKYGHYAKDWYSKK
        E Y C KYGHYAKD  S K
Subjt:  ERYNCGKYGHYAKDWYSKK

XP_016681346.1 uncharacterized protein LOC107900159 [Gossypium hirsutum]1.3e-2460.5Show/hide
Query:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR-GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV
        +TID+ + SL+AHEQRKKKKK+E LE+ALQTK +IK++K +  Q  +GR RGRG    GR G+G G   N EEK  ++QQNWRGR + RGRGG SN+ NV
Subjt:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR-GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV

Query:  ERYNCGKYGHYAKDWYSKK
        E Y CGKYGHYAKD  S K
Subjt:  ERYNCGKYGHYAKDWYSKK

TrEMBL top hitse value%identityAlignment
A0A1U8ITE2 uncharacterized protein LOC1079001596.4e-2560.5Show/hide
Query:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR-GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV
        +TID+ + SL+AHEQRKKKKK+E LE+ALQTK +IK++K +  Q  +GR RGRG    GR G+G G   N EEK  ++QQNWRGR + RGRGG SN+ NV
Subjt:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR-GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV

Query:  ERYNCGKYGHYAKDWYSKK
        E Y CGKYGHYAKD  S K
Subjt:  ERYNCGKYGHYAKDWYSKK

A0A6A3AD07 Uncharacterized protein4.2e-2457.98Show/hide
Query:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR-GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV
        +T+++   SLEAHEQRKKKKK+E LE+ALQTK  IK++K    Q+ RG+ RGRGG  +GR G+G  H    +E  Q+SQ NWRGRG+ RGRGG SN+ N+
Subjt:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR-GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV

Query:  ERYNCGKYGHYAKDWYSKK
        E Y C KYGHYAKD  S K
Subjt:  ERYNCGKYGHYAKDWYSKK

A0A6A3AQY9 CCHC-type domain-containing protein3.2e-2454.29Show/hide
Query:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGRGRG-RGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV
        +TIDD   SLEAHEQRKKK K E LEEALQ K+ IK++K +  Q+ RGR RGRG  S GRG G R  G   EE  Q+ QQNWRGRG+  GRGG SNH NV
Subjt:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGRGRG-RGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV

Query:  -------------------ERYNCGKYGHYAKDWYSKKKI
                           E YNCGK+GHYAK+ YS+K++
Subjt:  -------------------ERYNCGKYGHYAKDWYSKKKI

A0A6A3BX58 Uncharacterized protein3.2e-2457.98Show/hide
Query:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR-GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV
        +T+++   SLEAHEQRKKKKK+E LE+ALQTK  IK++K    Q+ RG+ RGRGG  +GR G+G  H    +E  Q+SQ NWRGRG+ RGRGG SN+ N+
Subjt:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR-GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV

Query:  ERYNCGKYGHYAKDWYSKK
        E Y C KYGHYAKD  S K
Subjt:  ERYNCGKYGHYAKDWYSKK

A0A6A3CZT6 Uncharacterized protein5.4e-2457.98Show/hide
Query:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR-GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV
        +TI++   SLEAHEQRKKK+K+E LE+ALQTK  IK++K    Q+ RG+ RGRGG  +GR G+G  H    +E  Q+SQ NWRGRG+ RGRGG SN+ N+
Subjt:  MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR-GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV

Query:  ERYNCGKYGHYAKDWYSKK
        E Y C KYGHYAKD  S K
Subjt:  ERYNCGKYGHYAKDWYSKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATTGATGATTTTGTACATTCCCTTGAAGCACATGAACAGAGAAAGAAGAAAAAGAAACAAGAGGTCTTGGAGGAGGCCTTACAAACAAAGATGACCATTAAAGA
AGACAAGGCAATGTCTGTGCAACACAACCGAGGAAGAAGACGTGGTCGTGGTGGTCACAGTTTTGGTCGCGGTAGAGGTCGTGGTCATGGAAATAACAATGAAGAGAAAG
CACAAACAAGCCAACAAAATTGGCGTGGAAGAGGCCAAGCTCGTGGAAGAGGTGGTCACTCAAATCATCCAAATGTCGAGCGTTACAATTGTGGAAAATATGGACACTAT
GCAAAAGATTGGTATTCCAAGAAGAAGATAGGGAGAGAGAGACCGAGAGAGGGAATAGCTCACCACAGTGAACAGCTGCAGGTGGCGCAGATGACGGGCATTCAACGGCA
GGATAGAGCGGCAGTGAACCGCGTCGGCGATCTGGGCGTGAATGGAAGTGAGCTGTGGCTGGGACCAGGCATGAACGAAGGAGAAAATCCAAAGGGGGTTGCGTGCATGC
TTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTATTGATGATTTTGTACATTCCCTTGAAGCACATGAACAGAGAAAGAAGAAAAAGAAACAAGAGGTCTTGGAGGAGGCCTTACAAACAAAGATGACCATTAAAGA
AGACAAGGCAATGTCTGTGCAACACAACCGAGGAAGAAGACGTGGTCGTGGTGGTCACAGTTTTGGTCGCGGTAGAGGTCGTGGTCATGGAAATAACAATGAAGAGAAAG
CACAAACAAGCCAACAAAATTGGCGTGGAAGAGGCCAAGCTCGTGGAAGAGGTGGTCACTCAAATCATCCAAATGTCGAGCGTTACAATTGTGGAAAATATGGACACTAT
GCAAAAGATTGGTATTCCAAGAAGAAGATAGGGAGAGAGAGACCGAGAGAGGGAATAGCTCACCACAGTGAACAGCTGCAGGTGGCGCAGATGACGGGCATTCAACGGCA
GGATAGAGCGGCAGTGAACCGCGTCGGCGATCTGGGCGTGAATGGAAGTGAGCTGTGGCTGGGACCAGGCATGAACGAAGGAGAAAATCCAAAGGGGGTTGCGTGCATGC
TTTAG
Protein sequenceShow/hide protein sequence
MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGRGRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNVERYNCGKYGHY
AKDWYSKKKIGRERPREGIAHHSEQLQVAQMTGIQRQDRAAVNRVGDLGVNGSELWLGPGMNEGENPKGVACML