| GenBank top hits | e value | %identity | Alignment |
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| RVW16199.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 8.5e-46 | 51.79 | Show/hide |
Query: MHASGPTYFEAVFRILRYLKGIPGKA----------------------------------------------KDSVVARSSAEAELRALAHSICEGIWIK
MHASGP +FEA++RILRYLKG G+ K +VVARSSAEAE RA+AH ICE +WI+
Subjt: MHASGPTYFEAVFRILRYLKGIPGKA----------------------------------------------KDSVVARSSAEAELRALAHSICEGIWIK
Query: RLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
RLLEELK + P+ +YCDNKA IS+AHNPVL++RTKH+EVDKHF KE ID G++C+ Y+PT EQ+VDV TK L K QFN L KLAM D+FKLA
Subjt: RLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
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| RVW20722.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 1.0e-46 | 60.9 | Show/hide |
Query: MHASGPTYFEAVFRILRYLKGIPG-------KAKDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHI
MHA GP +FE V+RILRYLKG PG K +VVARSSAE E R +AH ICE +WI+RLLEELK + P+ +YCDNK+ IS+AHNPVLH+RTKH+
Subjt: MHASGPTYFEAVFRILRYLKGIPG-------KAKDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHI
Query: EVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
EVDKHF KE ID G++C+ Y+PT EQ+ DV TK K QF+ L KLAM D+FK A
Subjt: EVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
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| RVW92973.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 1.3e-46 | 60.9 | Show/hide |
Query: MHASGPTYFEAVFRILRYLKGIPG-------KAKDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHI
MHA P +FE V+RILRYLKG PG K +V+A SSAEAE R +AH ICE +WI+RLLEELK + P+ +YCDNKA IS+AHNP+LH+RTKH+
Subjt: MHASGPTYFEAVFRILRYLKGIPG-------KAKDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHI
Query: EVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
EVDKHF KE ID G++C+ Y+PT EQ+VDV TK L K QF+ L KLAM D+FK A
Subjt: EVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
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| RVX04177.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 1.3e-46 | 57.74 | Show/hide |
Query: MHASGPTYFEAVFRILRYLKGIPGKA-------------------KDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIA
MHA GP +FE V++ILRYLKG PGK S+V RSS EAE RA+AH ICE WI+RLLEELK + P+ +YCDNKATIS+A
Subjt: MHASGPTYFEAVFRILRYLKGIPGKA-------------------KDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIA
Query: HNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
HNPVLH+RTKH+EVDKHF KE +D G++C+ Y+PT EQ+VDV TK L K QF+ L KLAM D+FK A
Subjt: HNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
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| RVX07808.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 2.4e-48 | 58.29 | Show/hide |
Query: MHASGPTYFEAVFRILRYLKGIPGKA--------------------------KDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDN
MHASGP +FEA++RILRYLKG P A K +VVARSSAEAE RA+AH ICE +WI+RLLEELK + P+ +YCDN
Subjt: MHASGPTYFEAVFRILRYLKGIPGKA--------------------------KDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDN
Query: KATISIAHNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
KA IS+AHNPVL++RTKH+EVDKHF KE ID G++C+ Y+PT EQ+VDV TK L K QFN L KLAM D+FKLA
Subjt: KATISIAHNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9EE05 Uncharacterized protein | 3.1e-46 | 51.79 | Show/hide |
Query: MHASGPTYFEAVFRILRYLKGIPGKA----------------------------------------------KDSVVARSSAEAELRALAHSICEGIWIK
MH+ GP +FEAV+RILRYLKG PGK K +VVARSSAEAE RA+AH ICE +WIK
Subjt: MHASGPTYFEAVFRILRYLKGIPGKA----------------------------------------------KDSVVARSSAEAELRALAHSICEGIWIK
Query: RLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
R+LEELK ++P+ +YCDNKA ISIAHNPVLH+RTKH+EVDKHF KE +++G+IC+PY+PT EQI DV TK L K QF+ L KL M D+FK A
Subjt: RLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
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| A0A438CBU5 Retrovirus-related Pol polyprotein from transposon RE1 | 4.8e-47 | 60.9 | Show/hide |
Query: MHASGPTYFEAVFRILRYLKGIPG-------KAKDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHI
MHA GP +FE V+RILRYLKG PG K +VVARSSAE E R +AH ICE +WI+RLLEELK + P+ +YCDNK+ IS+AHNPVLH+RTKH+
Subjt: MHASGPTYFEAVFRILRYLKGIPG-------KAKDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHI
Query: EVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
EVDKHF KE ID G++C+ Y+PT EQ+ DV TK K QF+ L KLAM D+FK A
Subjt: EVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
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| A0A438I8D6 Retrovirus-related Pol polyprotein from transposon RE1 | 6.3e-47 | 60.9 | Show/hide |
Query: MHASGPTYFEAVFRILRYLKGIPG-------KAKDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHI
MHA P +FE V+RILRYLKG PG K +V+A SSAEAE R +AH ICE +WI+RLLEELK + P+ +YCDNKA IS+AHNP+LH+RTKH+
Subjt: MHASGPTYFEAVFRILRYLKGIPG-------KAKDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHI
Query: EVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
EVDKHF KE ID G++C+ Y+PT EQ+VDV TK L K QF+ L KLAM D+FK A
Subjt: EVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
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| A0A438J5D4 Retrovirus-related Pol polyprotein from transposon RE1 | 6.3e-47 | 57.74 | Show/hide |
Query: MHASGPTYFEAVFRILRYLKGIPGKA-------------------KDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIA
MHA GP +FE V++ILRYLKG PGK S+V RSS EAE RA+AH ICE WI+RLLEELK + P+ +YCDNKATIS+A
Subjt: MHASGPTYFEAVFRILRYLKGIPGKA-------------------KDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIA
Query: HNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
HNPVLH+RTKH+EVDKHF KE +D G++C+ Y+PT EQ+VDV TK L K QF+ L KLAM D+FK A
Subjt: HNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
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| A0A438JFT4 Retrovirus-related Pol polyprotein from transposon RE1 | 1.2e-48 | 58.29 | Show/hide |
Query: MHASGPTYFEAVFRILRYLKGIPGKA--------------------------KDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDN
MHASGP +FEA++RILRYLKG P A K +VVARSSAEAE RA+AH ICE +WI+RLLEELK + P+ +YCDN
Subjt: MHASGPTYFEAVFRILRYLKGIPGKA--------------------------KDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDN
Query: KATISIAHNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
KA IS+AHNPVL++RTKH+EVDKHF KE ID G++C+ Y+PT EQ+VDV TK L K QFN L KLAM D+FKLA
Subjt: KATISIAHNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLKWQFNKLTDKLAMSDVFKLA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.4e-21 | 43.1 | Show/hide |
Query: KDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTK
+ + VA SS EAE AL ++ E +W+K LL + PI IY DN+ ISIA+NP H+R KHI++ HF +E + VIC+ Y+PT Q+ D+ TK
Subjt: KDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTK
Query: DLLKWQFNKLTDKLAM
L +F +L DKL +
Subjt: DLLKWQFNKLTDKLAM
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.2e-11 | 35.71 | Show/hide |
Query: VARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLK
VA S+ EAE A + E IW+KR L+EL Q + +YCD+++ I ++ N + H RTKHI+V H+ +E +D + V + T E D+LTK + +
Subjt: VARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTKDLLK
Query: WQFNKLTDKLAM
+F + + M
Subjt: WQFNKLTDKLAM
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.3e-17 | 39.5 | Show/hide |
Query: KDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTK
K V RSS EAE R++A++ E WI LL EL T P IYCDN + NPV H R KHI +D HF + + +G + V ++ T +Q+ D LTK
Subjt: KDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTK
Query: DLLKWQFNKLTDKLAMSDV
L + F K+ ++ V
Subjt: DLLKWQFNKLTDKLAMSDV
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.6e-16 | 38.66 | Show/hide |
Query: KDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTK
K V RSS EAE R++A++ E WI LL EL + P IYCDN + NPV H R KHI +D HF + + +G + V ++ T +Q+ D LTK
Subjt: KDSVVARSSAEAELRALAHSICEGIWIKRLLEELKFFQTMPIHIYCDNKATISIAHNPVLHERTKHIEVDKHFTKENIDTGVICVPYLPTTEQIVDVLTK
Query: DLLKWQFNKLTDKLAMSDV
L + F + K+ + V
Subjt: DLLKWQFNKLTDKLAMSDV
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