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Clc10G08865 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G08865
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein Ycf2
Genome locationClcChr10:20328232..20328441
RNA-Seq ExpressionClc10G08865
SyntenyClc10G08865
Gene Ontology termsNA
InterPro domainsIPR008543 - Uncharacterised protein family Ycf2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
A4QKX4 Protein Ycf2 A7.0e-0695.83Show/hide
Query:  AFREKIPIEVEGFFKQQGAGSTIR
        AFREKIPIEVEGFFKQQGAGSTI+
Subjt:  AFREKIPIEVEGFFKQQGAGSTIR
A4QKZ7 Protein Ycf2 B7.0e-0695.83Show/hide
Query:  AFREKIPIEVEGFFKQQGAGSTIR
        AFREKIPIEVEGFFKQQGAGSTI+
Subjt:  AFREKIPIEVEGFFKQQGAGSTIR
Q332R7 Protein Ycf25.4e-0695.83Show/hide
Query:  AFREKIPIEVEGFFKQQGAGSTIR
        AFREKIPIEVEGFFKQQGAGSTI+
Subjt:  AFREKIPIEVEGFFKQQGAGSTIR
Q8S8U1 Protein Ycf2 B7.0e-0695.83Show/hide
Query:  AFREKIPIEVEGFFKQQGAGSTIR
        AFREKIPIEVEGFFKQQGAGSTI+
Subjt:  AFREKIPIEVEGFFKQQGAGSTIR
Q8S8V2 Protein Ycf2 A7.0e-0695.83Show/hide
Query:  AFREKIPIEVEGFFKQQGAGSTIR
        AFREKIPIEVEGFFKQQGAGSTI+
Subjt:  AFREKIPIEVEGFFKQQGAGSTIR
Arabidopsis top hitse value%identityAlignment
ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core4.2e-0691.67Show/hide
Query:  AFREKIPIEVEGFFKQQGAGSTIR
        AFREKIPIEVEGF KQQGAGSTI+
Subjt:  AFREKIPIEVEGFFKQQGAGSTIR
ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core4.2e-0691.67Show/hide
Query:  AFREKIPIEVEGFFKQQGAGSTIR
        AFREKIPIEVEGF KQQGAGSTI+
Subjt:  AFREKIPIEVEGFFKQQGAGSTIR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGGCGGCGCTACCGAAAATCCGAGCGTCGACAGCCCGCTGCTCCCGCGCACCCAAACGGCGGCTGCTATACCTAATGGATTCTGCGCGCATGCCTGCGACGGAGC
TGTGCGAGCGATTGCTTTTCGTGAAAAAATACCAATTGAAGTGGAGGGCTTCTTCAAACAACAAGGAGCTGGGTCAACTATACGGCGAGGTGCAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGGCGGCGCTACCGAAAATCCGAGCGTCGACAGCCCGCTGCTCCCGCGCACCCAAACGGCGGCTGCTATACCTAATGGATTCTGCGCGCATGCCTGCGACGGAGC
TGTGCGAGCGATTGCTTTTCGTGAAAAAATACCAATTGAAGTGGAGGGCTTCTTCAAACAACAAGGAGCTGGGTCAACTATACGGCGAGGTGCAAGGTGA
Protein sequenceShow/hide protein sequence
MTGGATENPSVDSPLLPRTQTAAAIPNGFCAHACDGAVRAIAFREKIPIEVEGFFKQQGAGSTIRRGAR