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Clc10G08910 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G08910
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr10:20447093..20447701
RNA-Seq ExpressionClc10G08910
SyntenyClc10G08910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833202.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]2.7e-0942.86Show/hide
Query:  IKADIATSLTAQMATVTSLLKTIALNNHGGIASSAASINALNQVAT--------------------------NNSYGKTYNPGWRNYPNFRWGENQQQ
        I+ D  ++L+AQ+A +TSLL+TIALNN GG  +S  ++N +N  A+                          NN Y KTYNPGWRN+ NF WG NQQQ
Subjt:  IKADIATSLTAQMATVTSLLKTIALNNHGGIASSAASINALNQVAT--------------------------NNSYGKTYNPGWRNYPNFRWGENQQQ
XP_038874978.1 putative uncharacterized protein DDB_G0279653 [Benincasa hispida]8.6e-0841.51Show/hide
Query:  RRRAQAEVIKADIATSLTAQMATVTSLLKTIALNNHGGIASSAASINALNQVAT--------------------------NNSYGKTYNPGWRNYPNFRW
        RRR    ++ AD  T+L AQMA VTSLL+T+A+ N G ++ S+A  NA  Q+A                           NN Y  TYNPGWRN+PNF W
Subjt:  RRRAQAEVIKADIATSLTAQMATVTSLLKTIALNNHGGIASSAASINALNQVAT--------------------------NNSYGKTYNPGWRNYPNFRW

Query:  GENQQQ
        G N  Q
Subjt:  GENQQQ
XP_038880418.1 uncharacterized protein LOC120072068 [Benincasa hispida]8.6e-0841.75Show/hide
Query:  RRRAQAEVIKADIATSLTAQMATVTSLLKTIALNNHGGIASSAASINALNQVAT--------------------------NNSYGKTYNPGWRNYPNFRW
        +RRA++ ++ A+   SL AQMATVTSLL+TI +   G ++ S A  NAL QVA                           N S+G TYNPGWRN+P F W
Subjt:  RRRAQAEVIKADIATSLTAQMATVTSLLKTIALNNHGGIASSAASINALNQVAT--------------------------NNSYGKTYNPGWRNYPNFRW

Query:  GEN
        G N
Subjt:  GEN
XP_038902511.1 uncharacterized protein LOC120089170 [Benincasa hispida]1.9e-1044.34Show/hide
Query:  RRRAQAEVIKADIATSLTAQMATVTSLLKTIALNNHGGIASSAASINALNQVAT--------------------------NNSYGKTYNPGWRNYPNFRW
        RR+A++ +I  DI T+L AQMATVTSLL+ +A+ NHG ++  AA  N L QVA                           NN Y  TYNPGWRN+PNF W
Subjt:  RRRAQAEVIKADIATSLTAQMATVTSLLKTIALNNHGGIASSAASINALNQVAT--------------------------NNSYGKTYNPGWRNYPNFRW

Query:  GENQQQ
        G N  Q
Subjt:  GENQQQ
XP_038904239.1 uncharacterized protein LOC120090584 [Benincasa hispida]9.6e-0745Show/hide
Query:  RRRAQAEVIKADIATSLTAQMATVTSLLKTIALNNHGGIASSAASINALNQVATNNSYGKTYNPGWRNYPNFRWGENQQQ
        +R+A++ ++  D  T+L AQM  VTS L+T+A+ N G ++ SA   NAL           TYNPGWRN+PNF WG N  Q
Subjt:  RRRAQAEVIKADIATSLTAQMATVTSLLKTIALNNHGGIASSAASINALNQVATNNSYGKTYNPGWRNYPNFRWGENQQQ
TrEMBL top hitse value%identityAlignment
A0A1U7W848 uncharacterized protein LOC1042214588.2e-0438.16Show/hide
Query:  AEVIKADIATSLTAQMATVTSLLKTIALNNHGGIASSAASINALNQVATNNSYGKTYNPGWRNYPNFRWGENQQQQ
        A V++ D+ ++L+ Q+AT+T+ +  + L+N              +     N YG TYNP WRNYPNF WG NQ  Q
Subjt:  AEVIKADIATSLTAQMATVTSLLKTIALNNHGGIASSAASINALNQVATNNSYGKTYNPGWRNYPNFRWGENQQQQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAGAAATTTATGCAGAAGTATTTCCCTCCTACTGTGAATGCAAGAAGGAGACGATTTAAGAGGCTGGTGAGACGTAGAGCGCAAGCTGAAGTTATTAAAGCTGA
TATTGCTACAAGTCTGACAGCACAGATGGCTACGGTGACATCTTTGTTAAAGACCATAGCCCTGAACAATCATGGTGGAATAGCTAGTTCTGCTGCCTCAATCAACGCAT
TGAATCAAGTGGCAACAAACAACTCGTATGGTAAGACATATAATCCAGGTTGGAGAAATTACCCCAATTTCAGATGGGGAGAGAATCAGCAGCAACAGACAGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGAGAAATTTATGCAGAAGTATTTCCCTCCTACTGTGAATGCAAGAAGGAGACGATTTAAGAGGCTGGTGAGACGTAGAGCGCAAGCTGAAGTTATTAAAGCTGA
TATTGCTACAAGTCTGACAGCACAGATGGCTACGGTGACATCTTTGTTAAAGACCATAGCCCTGAACAATCATGGTGGAATAGCTAGTTCTGCTGCCTCAATCAACGCAT
TGAATCAAGTGGCAACAAACAACTCGTATGGTAAGACATATAATCCAGGTTGGAGAAATTACCCCAATTTCAGATGGGGAGAGAATCAGCAGCAACAGACAGACTAG
Protein sequenceShow/hide protein sequence
MMEKFMQKYFPPTVNARRRRFKRLVRRRAQAEVIKADIATSLTAQMATVTSLLKTIALNNHGGIASSAASINALNQVATNNSYGKTYNPGWRNYPNFRWGENQQQQTD