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Clc10G09710 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G09710
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr10:21926923..21927355
RNA-Seq ExpressionClc10G09710
SyntenyClc10G09710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044340.1 putative beta-D-xylosidase 5 isoform X2 [Cucumis melo var. makuwa]3.3e-3072.32Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLI--NDESSHRRTRSDFQTPMTFEFSD-KRSTHELTHSRSVNKGA----------FESGLSSYLSQ
        MEGLIPYLFHAMKKQKPRH+YRSQSVGSSRSYHLLI  NDESSHRRTRSD+Q P TFEF D +R + ELTHSRSVNK A          FES   SY  Q
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLI--NDESSHRRTRSDFQTPMTFEFSD-KRSTHELTHSRSVNKGA----------FESGLSSYLSQ

Query:  VSNKPTYYYGNP
        VSN+P Y YGNP
Subjt:  VSNKPTYYYGNP

KAG6576920.1 hypothetical protein SDJN03_24494, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2881.11Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLINDESSHRRTRSDFQTPMTFEFSDKRSTHELTHSRSVNKGAFESGLSSYLSQVSN
        MEGLIPYLFHAMKKQKPRH+YRSQSVGSSRSYHLL NDESSHRRTRSDFQ P  FE+ D+RS HEL HSRSV+KGAF    SSY  QVSN
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLINDESSHRRTRSDFQTPMTFEFSDKRSTHELTHSRSVNKGAFESGLSSYLSQVSN

KAG7014945.1 NADH-ubiquinone oxidoreductase chain 4L, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-2881.11Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLINDESSHRRTRSDFQTPMTFEFSDKRSTHELTHSRSVNKGAFESGLSSYLSQVSN
        MEGLIPYLFHAMKKQKPRH+YRSQSVGSSRSYHLL NDESSHRRTRSDFQ P  FE+ D+RS HEL HSRSV+KGAF    SSY  QVSN
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLINDESSHRRTRSDFQTPMTFEFSDKRSTHELTHSRSVNKGAFESGLSSYLSQVSN

KGN52765.1 hypothetical protein Csa_015267 [Cucumis sativus]1.2e-3274.77Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLI--NDESSHRRTRSDFQTPMTFEFSDKRSTHELTHSRSVNKGA----------FESGLSSYLSQV
        MEGLIPYLFHAMKKQKPRH+YRSQSVGSSRSYHLLI  NDESSHRRTRSD+Q P TFEF D+RST ELTHSRSVNK A          FES   SY  QV
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLI--NDESSHRRTRSDFQTPMTFEFSDKRSTHELTHSRSVNKGA----------FESGLSSYLSQV

Query:  SNKPTYYYGNP
        SN+P Y YGNP
Subjt:  SNKPTYYYGNP

XP_038905929.1 uncharacterized protein LOC120091851 [Benincasa hispida]2.2e-3479.09Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLI-NDESSHRRTRSDFQTPMTFEFSDKRSTHELTHSRSVNKGA----------FESGLSSYLSQVS
        MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLI NDESSHRRTRSDFQ P   EFSD+RSTHEL HSRSV+KGA          FESG SSY  QV+
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLI-NDESSHRRTRSDFQTPMTFEFSDKRSTHELTHSRSVNKGA----------FESGLSSYLSQVS

Query:  NKPTYYYGNP
        NKPT YYGNP
Subjt:  NKPTYYYGNP

TrEMBL top hitse value%identityAlignment
A0A0A0KT06 Uncharacterized protein5.9e-3374.77Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLI--NDESSHRRTRSDFQTPMTFEFSDKRSTHELTHSRSVNKGA----------FESGLSSYLSQV
        MEGLIPYLFHAMKKQKPRH+YRSQSVGSSRSYHLLI  NDESSHRRTRSD+Q P TFEF D+RST ELTHSRSVNK A          FES   SY  QV
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLI--NDESSHRRTRSDFQTPMTFEFSDKRSTHELTHSRSVNKGA----------FESGLSSYLSQV

Query:  SNKPTYYYGNP
        SN+P Y YGNP
Subjt:  SNKPTYYYGNP

A0A5A7TM95 Putative beta-D-xylosidase 5 isoform X21.6e-3072.32Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLI--NDESSHRRTRSDFQTPMTFEFSD-KRSTHELTHSRSVNKGA----------FESGLSSYLSQ
        MEGLIPYLFHAMKKQKPRH+YRSQSVGSSRSYHLLI  NDESSHRRTRSD+Q P TFEF D +R + ELTHSRSVNK A          FES   SY  Q
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLI--NDESSHRRTRSDFQTPMTFEFSD-KRSTHELTHSRSVNKGA----------FESGLSSYLSQ

Query:  VSNKPTYYYGNP
        VSN+P Y YGNP
Subjt:  VSNKPTYYYGNP

A0A5C7I5L1 Uncharacterized protein4.3e-1560.23Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLIN----DESSHRRTRSDFQTP-MTFEFSDKRSTHELTHSRSVNKGAFESGLSS
        MEGLIP+L HAMKKQ+P+H+YRS SVGS+RSYHLL      D SSHRRTRSDFQ P  T +F  +RS  E   SR+VN+ + E+  SS
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLIN----DESSHRRTRSDFQTP-MTFEFSDKRSTHELTHSRSVNKGAFESGLSS

A0A5D2I477 Uncharacterized protein5.6e-1575.81Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLINDESSHRRTRSDFQTPMTFEFSDKRS
        MEGLIPYL HAMKKQKP HNYRS SVGSSRSYHLL  + SSHRRTRS+FQ P T E  ++RS
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLINDESSHRRTRSDFQTPMTFEFSDKRS

A0A5D2S9N2 Uncharacterized protein4.3e-1575.81Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLINDESSHRRTRSDFQTPMTFEFSDKRS
        MEGLIPYL HAMKKQKP HNYRS SVGSSRSYHLL  + SSHRRTRS+FQ P T E  ++RS
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLINDESSHRRTRSDFQTPMTFEFSDKRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G19615.1 unknown protein1.2e-0953.42Show/hide
Query:  MEGLIPYLFHAMKK-QKPRH-NYRSQSVGSSRSYHLLINDE--------SSHRRTRSDFQTPMTFEFSDKRST
        MEGLIPYL HA+KK  KP H  YRS SVGSSRSY  L+  +        SSHRRTRSD+   +  +  D+RS+
Subjt:  MEGLIPYLFHAMKK-QKPRH-NYRSQSVGSSRSYHLLINDE--------SSHRRTRSDFQTPMTFEFSDKRST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGCTTAATTCCTTATCTTTTCCATGCAATGAAGAAGCAAAAGCCACGCCATAACTATAGAAGCCAATCCGTAGGTTCAAGCAGGAGCTACCATCTATTA
ATCAACGACGAGTCGTCTCACCGACGAACACGATCGGATTTTCAGACACCAATGACGTTCGAGTTCTCGGACAAACGATCGACGCATGAGTTAACGCATTCCCGC
AGTGTTAACAAAGGCGCCTTTGAATCTGGCTTATCTTCTTATCTTAGTCAGGTTTCAAATAAGCCTACTTATTATTATGGTAATCCTCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATTTAACACAAACAAGATCTTTTTGTGCAAGTCTTGAAAGAAAGAAGAACAATAAAGTTAGGGTAATGGAGGGCTTAATTCCTTATCTTTTCCATGCAATGAAGA
AGCAAAAGCCACGCCATAACTATAGAAGCCAATCCGTAGGTTCAAGCAGGAGCTACCATCTATTAATCAACGACGAGTCGTCTCACCGACGAACACGATCGGATT
TTCAGACACCAATGACGTTCGAGTTCTCGGACAAACGATCGACGCATGAGTTAACGCATTCCCGCAGTGTTAACAAAGGCGCCTTTGAATCTGGCTTATCTTCTT
ATCTTAGTCAGGTTTCAAATAAGCCTACTTATTATTATGGTAATCCTCGTTAAAAAGAAATAGGAGGAAGATTTACTGTTATTTAAAATTTCAAGTGATATAGTA
ATTTACTGATTTG
Protein sequenceShow/hide protein sequence
MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLINDESSHRRTRSDFQTPMTFEFSDKRSTHELTHSRSVNKGAFESGLSSYLSQVSNKPTYYYGNPR